pycom08g12090

Phosphoenolpyruvate carboxylase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
N/A
Physical Location & Seq
Reverse (-)
10366605 .. 10366799
195 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 195 bp
ATGGAAATTGGTCGCAACGATGCTCTGCTTTTGGATCGGTTTCTGAATATCCTCCAAGATTTACATGGGGAGGATCTCAGGGAAACGGTGAGGGTGGCCGGAGATGAAGAGGACTTCGCTGGAGTTATGAAGGTGAGGGTGGCGTCGGGTGTGGAAGTGAGAATGCACGGTGGTGATGGGAATGGGTCTAATTGA

Protein Analysis

65

Amino Acids

7.0

Weight (kDa)

4.6

Isoelectric Point (pI)

45.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 42, 81
AcoI YGGCCR 1 cut(s) 96
AcyI GRCGYC 1 cut(s) 143
AleI CACNNNNGTG 1 cut(s) 171
AlwI GGATC 2 cut(s) 42, 81
AoxI GGCC 1 cut(s) 96
AsuHPI GGTGA 3 cut(s) 100, 145, 185
BccI CCATC 1 cut(s) 170
BmsI GCATC 1 cut(s) 10
BpmI CTGGAG 1 cut(s) 141
BsaHI GRCGYC 1 cut(s) 143
BseMII CTCAG 1 cut(s) 91
BshFI GGCC 1 cut(s) 98
BsiSI CCGG 1 cut(s) 99
BsmI GAATGC 1 cut(s) 168
BsnI GGCC 1 cut(s) 98
Bsp143I GATC 2 cut(s) 34, 73
BspANI GGCC 1 cut(s) 98
BspCNI CTCAG 1 cut(s) 90
BspPI GGATC 2 cut(s) 42, 81
BssMI GATC 2 cut(s) 34, 73
BssNI GRCGYC 1 cut(s) 143
Bst4CI ACNGT 2 cut(s) 88, 170
Bst6I CTCTTC 1 cut(s) 102
BstACI GRCGYC 1 cut(s) 143
BstDEI CTNAG 1 cut(s) 77
BstKTI GATC 2 cut(s) 37, 76
BstMBI GATC 2 cut(s) 34, 73
BstX2I RGATCY 1 cut(s) 73
BstYI RGATCY 1 cut(s) 73
BsuRI GGCC 1 cut(s) 98
CseI GACGC 1 cut(s) 132
CviAII CATG 1 cut(s) 65
CviJI RGCY 1 cut(s) 98
CviKI_1 RGCY 1 cut(s) 98
DdeI CTNAG 1 cut(s) 77
DpnI GATC 2 cut(s) 36, 75
DpnII GATC 2 cut(s) 34, 73
EaeI YGGCCR 1 cut(s) 96
Eam1104I CTCTTC 1 cut(s) 102
EarI CTCTTC 1 cut(s) 102
FaeI CATG 1 cut(s) 68
FaiI YATR 2 cut(s) 66, 128
FatI CATG 1 cut(s) 64
GsuI CTGGAG 1 cut(s) 141
HaeIII GGCC 1 cut(s) 98
HapII CCGG 1 cut(s) 99
HgaI GACGC 1 cut(s) 132
Hin1I GRCGYC 1 cut(s) 143
Hin1II CATG 1 cut(s) 68
HpaII CCGG 1 cut(s) 99
HphI GGTGA 3 cut(s) 100, 145, 185
Hpy188I TCNGA 1 cut(s) 45
Hpy99I CGWCG 1 cut(s) 148
HpyAV CCTTC 1 cut(s) 124
HpyCH4III ACNGT 2 cut(s) 88, 170
HpyCH4V TGCA 1 cut(s) 166
HpyF3I CTNAG 1 cut(s) 77
Hsp92I GRCGYC 1 cut(s) 143
Hsp92II CATG 1 cut(s) 68
Kzo9I GATC 2 cut(s) 34, 73
LpnPI CCDG 3 cut(s) 64, 105, 112
LweI GCATC 1 cut(s) 10
MalI GATC 2 cut(s) 36, 75
MboI GATC 2 cut(s) 34, 73
MboII GAAGA 1 cut(s) 119
MflI RGATCY 1 cut(s) 73
MluCI AATT 2 cut(s) 6, 190
MnlI CCTC 5 cut(s) 62, 64, 84, 103, 129
MslI CAYNNNNRTG 1 cut(s) 171
MspI CCGG 1 cut(s) 99
Mva1269I GAATGC 1 cut(s) 168
NdeII GATC 2 cut(s) 34, 73
NlaIII CATG 1 cut(s) 68
OliI CACNNNNGTG 1 cut(s) 171
PctI GAATGC 1 cut(s) 168
PsuI RGATCY 1 cut(s) 73
RseI CAYNNNNRTG 1 cut(s) 171
Sau3AI GATC 2 cut(s) 34, 73
SetI ASST 1 cut(s) 135
SfaNI GCATC 1 cut(s) 10
SgeI CNNG 7 cut(s) 68, 77, 91, 111, 132, 159, 179
SmiMI CAYNNNNRTG 1 cut(s) 171
Sse9I AATT 2 cut(s) 6, 190
TaaI ACNGT 2 cut(s) 88, 170
TasI AATT 2 cut(s) 6, 190
TspDTI ATGAA 2 cut(s) 120, 143
XcmI CCANNNNNNNNNTGG 1 cut(s) 62
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.