Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

12598979 .. 12600721

Gene Structure 1743 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 654 bp

ATGTTCTCCGGCACCATCTCCAGCTCAAGGTCTCAAAGGTCCTCCATTTCGCCTTTTCGCTCCCGGAAGTCCTCCGGACCCACCAAGCCTCCTACGCCCTCGCCTCGCCCTGCCACCCCTTCTTCCTCCACGACGTCTTCTCGGCACCCCACTTCCAAGCCCTCTCTGTCTCCGGCCTCCTCCTCCGCCAGCCCAAACCCGCCGTCCCTGCCGTCCCCGCCCGATGTCTCCAAGTCCAAGGAGAATGTCACCGTCACTGTCCGCTTTCGTCCCCTCAGTGCTCGGGAGATTAACAAAGGGGACGAAATAGCGTGGTATGCTGATGGCGATTATACAGTCAGGAACGAGTCCAATTCCTGCATTGTTTACGGTTTCGATAAGGTTTTTGGTCCAGCAACGACGACACGCCATGTCTATGATGTCGCCGCACAACACGTTGTTAGTGGCGTTATGCAAGGGATTAATGGTACTGTGTTTGCATATGGGGTTACTAGTAGTGGGAAAACACATACAATGCATGGGGAGCAAAAGTCACCAGGAATTATTCCACTGGCAGTGAAGGATGTTTTTGGAATTATACAGGAGACACCTGGGCGGGAGTTTCTTCTTCGTGTTTCATATCTGGAAATATACAATGAGGTCAGTCTTTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0035371 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0071944 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:1990752

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

218

Amino Acids

23.32

Weight (kDa)

9.64

Isoelectric Point (pI)

58.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	80 - 214	4.5e-18	Microtubule binding
Kinesin	PF00225	88 - 214	1.2e-34	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	137
AccB1I	GGYRCC	2 cut(s)	11, 144
AccIII	TCCGGA	1 cut(s)	74
AciI	CCGC	6 cut(s)	186, 200, 218, 262, 426, 595
AcyI	GRCGYC	1 cut(s)	134
AfaI	GTAC	1 cut(s)	469
AfiI	CCNNNNNNNGG	1 cut(s)	27
AflIII	ACRYGT	1 cut(s)	433
AhlI	ACTAGT	1 cut(s)	491
AjnI	CCWGG	2 cut(s)	535, 589
AluBI	AGCT	1 cut(s)	24
AluI	AGCT	1 cut(s)	24
Alw21I	GWGCWC	1 cut(s)	283
Alw26I	GTCTC	4 cut(s)	36, 174, 232, 578
Ama87I	CYCGRG	1 cut(s)	282
Aor13HI	TCCGGA	1 cut(s)	74
AoxI	GGCC	1 cut(s)	174
ArsI	GACNNNNNNTTYG	2 cut(s)	188, 220
AseI	ATTAAT	1 cut(s)	462
AspS9I	GGNCC	3 cut(s)	39, 77, 389
AsuC2I	CCSGG	1 cut(s)	64
AsuHPI	GGTGA	2 cut(s)	241, 525
AvaI	CYCGRG	1 cut(s)	282
AvaII	GGWCC	3 cut(s)	39, 77, 389
BanI	GGYRCC	2 cut(s)	11, 144
BbsI	GAAGAC	1 cut(s)	129
Bbv12I	GWGCWC	1 cut(s)	283
BccI	CCATC	2 cut(s)	23, 317
BceAI	ACGGC	2 cut(s)	187, 196
BciT130I	CCWGG	2 cut(s)	537, 591
BcnI	CCSGG	1 cut(s)	64
BcoDI	GTCTC	4 cut(s)	36, 174, 232, 578
BcuI	ACTAGT	1 cut(s)	491
BfaI	CTAG	2 cut(s)	492, 652
BisI	GCNGC	1 cut(s)	426
BlsI	GCNGC	1 cut(s)	427
Bme1390I	CCNGG	3 cut(s)	64, 537, 591
Bme18I	GGWCC	3 cut(s)	39, 77, 389
BmeT110I	CYCGRG	1 cut(s)	282
BmgT120I	GGNCC	3 cut(s)	39, 77, 389
BmiI	GGNNCC	3 cut(s)	13, 79, 146
BmrFI	CCNGG	3 cut(s)	64, 537, 591
BpiI	GAAGAC	1 cut(s)	129
BpmI	CTGGAG	1 cut(s)	4
BpuEI	CTTGAG	1 cut(s)	10
BpuMI	CCSGG	1 cut(s)	64
BsaHI	GRCGYC	1 cut(s)	134
BsaI	GGTCTC	1 cut(s)	36
BsaJI	CCNNGG	2 cut(s)	237, 590
BsaWI	WCCGGW	1 cut(s)	74
BsaXI	ACNNNNNCTCC	4 cut(s)	73, 103, 515, 545
Bsc4I	CCNNNNNNNGG	1 cut(s)	27
Bse1I	ACTGG	1 cut(s)	555
BseAI	TCCGGA	1 cut(s)	74
BseBI	CCWGG	2 cut(s)	537, 591
BseDI	CCNNGG	2 cut(s)	237, 590
BseGI	GGATG	1 cut(s)	568
BseLI	CCNNNNNNNGG	1 cut(s)	27
BseMII	CTCAG	1 cut(s)	289
BseNI	ACTGG	1 cut(s)	555
BseRI	GAGGAG	2 cut(s)	169, 172
BshFI	GGCC	1 cut(s)	176
BshNI	GGYRCC	2 cut(s)	11, 144
BsiHKAI	GWGCWC	1 cut(s)	283
BsiHKCI	CYCGRG	1 cut(s)	282
BsiSI	CCGG	4 cut(s)	9, 64, 75, 173
BslFI	GGGAC	4 cut(s)	190, 199, 255, 314
BslI	CCNNNNNNNGG	1 cut(s)	27
BsmAI	GTCTC	4 cut(s)	36, 174, 232, 578
BsmFI	GGGAC	4 cut(s)	190, 199, 255, 314
BsnI	GGCC	1 cut(s)	176
Bso31I	GGTCTC	1 cut(s)	36
BsoBI	CYCGRG	1 cut(s)	282
Bsp1286I	GDGCHC	1 cut(s)	283
Bsp13I	TCCGGA	1 cut(s)	74
BspACI	CCGC	6 cut(s)	186, 200, 218, 262, 426, 595
BspANI	GGCC	1 cut(s)	176
BspCNI	CTCAG	1 cut(s)	288
BspEI	TCCGGA	1 cut(s)	74
BspLI	GGNNCC	3 cut(s)	13, 79, 146
BspT107I	GGYRCC	2 cut(s)	11, 144
BspTNI	GGTCTC	1 cut(s)	36
BsrI	ACTGG	1 cut(s)	555
BssECI	CCNNGG	2 cut(s)	237, 590
BssNI	GRCGYC	1 cut(s)	134
BssT1I	CCWWGG	1 cut(s)	237
Bst2UI	CCWGG	2 cut(s)	537, 591
Bst4CI	ACNGT	5 cut(s)	253, 259, 337, 371, 472
BstACI	GRCGYC	1 cut(s)	134
BstC8I	GCNNGC	1 cut(s)	190
BstDEI	CTNAG	1 cut(s)	275
BstF5I	GGATG	1 cut(s)	568
BstMAI	GTCTC	4 cut(s)	36, 174, 232, 578
BstMWI	GCNNNNNNNGC	5 cut(s)	94, 208, 217, 317, 523
BstNI	CCWGG	2 cut(s)	537, 591
BstSCI	CCNGG	3 cut(s)	62, 535, 589
BstV2I	GAAGAC	1 cut(s)	129
BsuRI	GGCC	1 cut(s)	176
BtsCI	GGATG	1 cut(s)	568
BtsI	GCAGTG	1 cut(s)	561
BtsIMutI	CAGTG	4 cut(s)	255, 283, 548, 561
Cac8I	GCNNGC	1 cut(s)	190
Cfr13I	GGNCC	3 cut(s)	39, 77, 389
Csp6I	GTAC	1 cut(s)	468
CviAII	CATG	2 cut(s)	410, 518
CviJI	RGCY	5 cut(s)	24, 88, 160, 176, 192
CviKI_1	RGCY	5 cut(s)	24, 88, 160, 176, 192
CviQI	GTAC	1 cut(s)	468
DdeI	CTNAG	1 cut(s)	275
EciI	GGCGGA	1 cut(s)	175
Eco130I	CCWWGG	1 cut(s)	237
Eco31I	GGTCTC	1 cut(s)	36
Eco47I	GGWCC	3 cut(s)	39, 77, 389
Eco88I	CYCGRG	1 cut(s)	282
EcoO109I	RGGNCCY	1 cut(s)	39
EcoRII	CCWGG	2 cut(s)	535, 589
EcoT14I	CCWWGG	1 cut(s)	237
EcoT22I	ATGCAT	1 cut(s)	519
ErhI	CCWWGG	1 cut(s)	237
FaeI	CATG	2 cut(s)	413, 521
FaqI	GGGAC	4 cut(s)	190, 199, 255, 314
FatI	CATG	2 cut(s)	409, 517
FauI	CCCGC	3 cut(s)	207, 225, 588
FauNDI	CATATG	1 cut(s)	481
Fnu4HI	GCNGC	1 cut(s)	426
FokI	GGATG	1 cut(s)	575
Fsp4HI	GCNGC	1 cut(s)	426
FspBI	CTAG	2 cut(s)	492, 652
GluI	GCNGC	1 cut(s)	426
GsuI	CTGGAG	1 cut(s)	4
HaeIII	GGCC	1 cut(s)	176
HapII	CCGG	4 cut(s)	9, 64, 75, 173
Hin1I	GRCGYC	1 cut(s)	134
Hin1II	CATG	2 cut(s)	413, 521
HinfI	GANTC	1 cut(s)	347
HpaII	CCGG	4 cut(s)	9, 64, 75, 173
HphI	GGTGA	2 cut(s)	241, 525
Hpy166II	GTNNAC	1 cut(s)	367
Hpy188III	TCNNGA	4 cut(s)	75, 284, 340, 623
Hpy8I	GTNNAC	1 cut(s)	367
Hpy99I	CGWCG	2 cut(s)	136, 403
HpyAV	CCTTC	2 cut(s)	129, 553
HpyCH4III	ACNGT	5 cut(s)	253, 259, 337, 371, 472
HpyCH4IV	ACGT	2 cut(s)	134, 435
HpyCH4V	TGCA	4 cut(s)	360, 454, 479, 517
HpyF10VI	GCNNNNNNNGC	5 cut(s)	94, 208, 217, 317, 523
HpyF3I	CTNAG	1 cut(s)	275
HpySE526I	ACGT	2 cut(s)	134, 435
Hsp92I	GRCGYC	1 cut(s)	134
Hsp92II	CATG	2 cut(s)	413, 521
Kpn2I	TCCGGA	1 cut(s)	74
LmnI	GCTCC	2 cut(s)	65, 523
MaeI	CTAG	2 cut(s)	492, 652
MaeII	ACGT	2 cut(s)	134, 435
MaeIII	GTNAC	4 cut(s)	247, 253, 487, 531
MboII	GAAGA	4 cut(s)	114, 129, 596, 599
MhlI	GDGCHC	1 cut(s)	283
MluCI	AATT	3 cut(s)	352, 540, 573
MlyI	GAGTC	1 cut(s)	356
Mph1103I	ATGCAT	1 cut(s)	519
MroI	TCCGGA	1 cut(s)	74
MseI	TTAA	2 cut(s)	291, 462
MslI	CAYNNNNRTG	1 cut(s)	414
MspI	CCGG	4 cut(s)	9, 64, 75, 173
MspR9I	CCNGG	3 cut(s)	64, 537, 591
MvaI	CCWGG	2 cut(s)	537, 591
MwoI	GCNNNNNNNGC	5 cut(s)	94, 208, 217, 317, 523
NciI	CCSGG	1 cut(s)	64
NdeI	CATATG	1 cut(s)	481
NlaIII	CATG	2 cut(s)	413, 521
NlaIV	GGNNCC	3 cut(s)	13, 79, 146
NmeAIII	GCCGAG	1 cut(s)	121
NmuCI	GTSAC	3 cut(s)	247, 253, 531
NsiI	ATGCAT	1 cut(s)	519
PfoI	TCCNGGA	1 cut(s)	62
PkrI	GCNGC	1 cut(s)	427
PleI	GAGTC	1 cut(s)	355
PpsI	GAGTC	1 cut(s)	355
PpuMI	RGGWCCY	1 cut(s)	39
PshBI	ATTAAT	1 cut(s)	462
Psp5II	RGGWCCY	1 cut(s)	39
Psp6I	CCWGG	2 cut(s)	535, 589
PspGI	CCWGG	2 cut(s)	535, 589
PspN4I	GGNNCC	3 cut(s)	13, 79, 146
PspPI	GGNCC	3 cut(s)	39, 77, 389
PspPPI	RGGWCCY	1 cut(s)	39
RsaI	GTAC	1 cut(s)	469
RsaNI	GTAC	1 cut(s)	468
RseI	CAYNNNNRTG	1 cut(s)	414
SaqAI	TTAA	2 cut(s)	291, 462
SatI	GCNGC	1 cut(s)	426
Sau96I	GGNCC	3 cut(s)	39, 77, 389
SchI	GAGTC	1 cut(s)	356
ScrFI	CCNGG	3 cut(s)	64, 537, 591
SduI	GDGCHC	1 cut(s)	283
SetI	ASST	8 cut(s)	26, 32, 41, 137, 384, 438, 592, 642
SinI	GGWCC	3 cut(s)	39, 77, 389
SmiMI	CAYNNNNRTG	1 cut(s)	414
SmlI	CTYRAG	1 cut(s)	25
SmoI	CTYRAG	1 cut(s)	25
SpeI	ACTAGT	1 cut(s)	491
Sse9I	AATT	3 cut(s)	352, 540, 573
SsiI	CCGC	6 cut(s)	186, 200, 218, 262, 426, 595
SspMI	CTAG	2 cut(s)	492, 652
StyD4I	CCNGG	3 cut(s)	62, 535, 589
StyI	CCWWGG	1 cut(s)	237
TaaI	ACNGT	5 cut(s)	253, 259, 337, 371, 472
TaiI	ACGT	2 cut(s)	137, 438
TaqI	TCGA	1 cut(s)	375
TasI	AATT	3 cut(s)	352, 540, 573
TauI	GCSGC	1 cut(s)	428
Tru1I	TTAA	2 cut(s)	291, 462
Tru9I	TTAA	2 cut(s)	291, 462
TscAI	CASTG	4 cut(s)	262, 283, 555, 561
TseFI	GTSAC	3 cut(s)	247, 253, 531
Tsp45I	GTSAC	3 cut(s)	247, 253, 531
TspDTI	ATGAA	1 cut(s)	606
TspRI	CASTG	4 cut(s)	262, 283, 555, 561
VpaK11BI	GGWCC	3 cut(s)	39, 77, 389
VspI	ATTAAT	1 cut(s)	462
XspI	CTAG	2 cut(s)	492, 652
ZraI	GACGTC	1 cut(s)	135
Zsp2I	ATGCAT	1 cut(s)	519

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.