pycom08g14680

Mannose-1-phosphate guanyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
N/A
Physical Location & Seq
Reverse (-)
14050200 .. 14051185
986 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 540 bp
ATGAAGAAAGGTTTGGGAAGATTGGGTCTGGTAGGGAGGGATCACGGGAGAGGTCATGGTCCTCATCAATATTTCATCACCGTCGTGGAAACCTTCGAATTCGGAGTTAGCCGCACCTCTGATGTTGTATTTGTGCCTCTGGAACAGTTGCATATCTTTTTGCTGAATTGTGATGTTTGCTGCAATTTTCCACTTCAGACATACTTAATAAGATTTCGAAAAGTTAATTCCTTTTATTGCTTCTTGTTGTTCATCATTGCATATGCTCATAAAGGATATAAGGTGATGGGTACAATGTTAGTAATTAAAGTTTCTACTGAATCTTCGAACCAGTTTTGGCAGTTGGTTGATCCTGCCACCAAAGAACTATTGCATTATACTGAGAAGCCAGAGACTTTTGTATGTACACGATGCAATTACCTGAGTGATTTGATCAATTGTGGTCTATATGTATTTGCTCCCACATATTTTACTGCCATTCAAGAAGTCTCCAGTCATCGAGAAGGCAGAGGTTGGTCTTTTTCTTTACTGGCATTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

180

Amino Acids

20.55

Weight (kDa)

8.46

Isoelectric Point (pI)

28.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 112
AclWI GGATC 2 cut(s) 48, 344
AcsI RAATTY 1 cut(s) 98
AcuI CTGAAG 1 cut(s) 179
AfaI GTAC 2 cut(s) 292, 406
AgsI TTSAA 1 cut(s) 482
AjuI GAANNNNNNNTTGG 1 cut(s) 28
AleI CACNNNNGTG 1 cut(s) 83
Alw26I GTCTC 2 cut(s) 386, 493
AlwI GGATC 2 cut(s) 48, 344
ApeKI GCWGC 1 cut(s) 180
ApoI RAATTY 1 cut(s) 98
AspS9I GGNCC 1 cut(s) 59
AsuHPI GGTGA 2 cut(s) 70, 295
AsuII TTCGAA 3 cut(s) 96, 217, 326
AvaII GGWCC 1 cut(s) 59
BbvI GCAGC 1 cut(s) 167
BccI CCATC 1 cut(s) 280
BclI TGATCA 1 cut(s) 432
BcoDI GTCTC 2 cut(s) 386, 493
BisI GCNGC 2 cut(s) 112, 181
BlsI GCNGC 2 cut(s) 113, 182
Bme18I GGWCC 1 cut(s) 59
BmgT120I GGNCC 1 cut(s) 59
BmsI GCATC 1 cut(s) 401
BpmI CTGGAG 1 cut(s) 475
Bpu14I TTCGAA 3 cut(s) 96, 217, 326
Bse1I ACTGG 3 cut(s) 331, 492, 534
Bse3DI GCAATG 1 cut(s) 255
BseMI GCAATG 1 cut(s) 255
BseMII CTCAG 2 cut(s) 372, 413
BseNI ACTGG 3 cut(s) 331, 492, 534
BseXI GCAGC 1 cut(s) 167
BsmAI GTCTC 2 cut(s) 386, 493
Bsp119I TTCGAA 3 cut(s) 96, 217, 326
Bsp1407I TGTACA 1 cut(s) 404
Bsp143I GATC 3 cut(s) 40, 349, 432
BspACI CCGC 1 cut(s) 112
BspCNI CTCAG 2 cut(s) 373, 414
BspPI GGATC 2 cut(s) 48, 344
BspT104I TTCGAA 3 cut(s) 96, 217, 326
BsrDI GCAATG 1 cut(s) 255
BsrGI TGTACA 1 cut(s) 404
BsrI ACTGG 3 cut(s) 331, 492, 534
BssMI GATC 3 cut(s) 40, 349, 432
Bst4CI ACNGT 2 cut(s) 82, 147
BstAUI TGTACA 1 cut(s) 404
BstBI TTCGAA 3 cut(s) 96, 217, 326
BstDEI CTNAG 2 cut(s) 381, 422
BstKTI GATC 3 cut(s) 43, 352, 435
BstMAI GTCTC 2 cut(s) 386, 493
BstMBI GATC 3 cut(s) 40, 349, 432
BstV1I GCAGC 1 cut(s) 167
Cfr13I GGNCC 1 cut(s) 59
Csp6I GTAC 2 cut(s) 291, 405
CviAII CATG 1 cut(s) 56
CviJI RGCY 2 cut(s) 111, 388
CviKI_1 RGCY 2 cut(s) 111, 388
CviQI GTAC 2 cut(s) 291, 405
DdeI CTNAG 2 cut(s) 381, 422
DpnI GATC 3 cut(s) 42, 351, 434
DpnII GATC 3 cut(s) 40, 349, 432
Eco47I GGWCC 1 cut(s) 59
Eco57I CTGAAG 1 cut(s) 179
EcoRI GAATTC 1 cut(s) 98
FaeI CATG 1 cut(s) 59
FatI CATG 1 cut(s) 55
FauNDI CATATG 1 cut(s) 262
FbaI TGATCA 1 cut(s) 432
Fnu4HI GCNGC 2 cut(s) 112, 181
Fsp4HI GCNGC 2 cut(s) 112, 181
GluI GCNGC 2 cut(s) 112, 181
GsuI CTGGAG 1 cut(s) 475
Hin1II CATG 1 cut(s) 59
HinfI GANTC 1 cut(s) 320
HphI GGTGA 2 cut(s) 70, 295
Hpy166II GTNNAC 1 cut(s) 407
Hpy188I TCNGA 3 cut(s) 104, 121, 198
Hpy188III TCNNGA 3 cut(s) 140, 482, 500
Hpy8I GTNNAC 1 cut(s) 407
Hpy99I CGWCG 1 cut(s) 86
HpyAV CCTTC 2 cut(s) 103, 497
HpyCH4III ACNGT 2 cut(s) 82, 147
HpyCH4V TGCA 5 cut(s) 151, 183, 260, 373, 414
HpyF3I CTNAG 2 cut(s) 381, 422
Hsp92II CATG 1 cut(s) 59
Ksp22I TGATCA 1 cut(s) 432
Kzo9I GATC 3 cut(s) 40, 349, 432
LmnI GCTCC 1 cut(s) 463
LpnPI CCDG 8 cut(s) 14, 125, 344, 366, 402, 434, 505, 515
Lsp1109I GCAGC 1 cut(s) 167
LweI GCATC 1 cut(s) 401
MalI GATC 3 cut(s) 42, 351, 434
MboI GATC 3 cut(s) 40, 349, 432
MboII GAAGA 3 cut(s) 16, 30, 315
MfeI CAATTG 1 cut(s) 436
MluCI AATT 7 cut(s) 98, 166, 184, 226, 303, 415, 436
MnlI CCTC 6 cut(s) 30, 44, 72, 127, 147, 503
MseI TTAA 3 cut(s) 206, 225, 306
MslI CAYNNNNRTG 1 cut(s) 83
MunI CAATTG 1 cut(s) 436
NdeI CATATG 1 cut(s) 262
NdeII GATC 3 cut(s) 40, 349, 432
NlaIII CATG 1 cut(s) 59
NspV TTCGAA 3 cut(s) 96, 217, 326
OliI CACNNNNGTG 1 cut(s) 83
PfeI GAWTC 1 cut(s) 320
PkrI GCNGC 2 cut(s) 113, 182
PspPI GGNCC 1 cut(s) 59
RsaI GTAC 2 cut(s) 292, 406
RsaNI GTAC 2 cut(s) 291, 405
RseI CAYNNNNRTG 1 cut(s) 83
SaqAI TTAA 3 cut(s) 206, 225, 306
SatI GCNGC 2 cut(s) 112, 181
Sau3AI GATC 3 cut(s) 40, 349, 432
Sau96I GGNCC 1 cut(s) 59
SetI ASST 7 cut(s) 13, 55, 95, 119, 285, 423, 514
SfaNI GCATC 1 cut(s) 401
SfuI TTCGAA 3 cut(s) 96, 217, 326
SinI GGWCC 1 cut(s) 59
SmiMI CAYNNNNRTG 1 cut(s) 83
Sse9I AATT 7 cut(s) 98, 166, 184, 226, 303, 415, 436
SsiI CCGC 1 cut(s) 112
SspI AATATT 1 cut(s) 71
TaaI ACNGT 2 cut(s) 82, 147
TaqI TCGA 4 cut(s) 96, 217, 326, 499
TasI AATT 7 cut(s) 98, 166, 184, 226, 303, 415, 436
TatI WGTACW 1 cut(s) 404
TauI GCSGC 1 cut(s) 114
TfiI GAWTC 1 cut(s) 320
Tru1I TTAA 3 cut(s) 206, 225, 306
Tru9I TTAA 3 cut(s) 206, 225, 306
TseI GCWGC 1 cut(s) 180
TspDTI ATGAA 3 cut(s) 17, 64, 241
VpaK11BI GGWCC 1 cut(s) 59
XapI RAATTY 1 cut(s) 98
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.