pycom09g03710

Catalytic subunit of pyrophosphate--fructose 6-phosphate 1-phosphotransferase. Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
N/A
Physical Location & Seq
Reverse (-)
2743389 .. 2746271
2883 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1263 bp
ATGTACTCCATGAATGGCAAGGCAGTGCCTGGTCGCTTCGTCTCTTCATACAGCGAGGTCCAGGGCAGTCGTCTCGACGTTCCGCTTCCTCTCCCTTCTGTTCTGAAGAGCTCCTTCAGCGTCGTCGATGGCTCCAAAAGCTCTGCCGCCGGAAACCCAGAGGAAATAGCCAAGTTGTTTCCTAACCTATTTGGGCAGCCTTCGGCAATGCTACGGCCAGGCGGTTCTTCGGTGCTTTCGAAGGATACGAGTTTGAAGATTGGAGTGGTTCTCTCAGGAGGACAGGCTCCCGGTGGACACAATGTTATTTGTGGGATATTTGATTACTTGCAGAAGCACACTAGTGGAAGCATAATGTATGGATTTAAGGGTGGTCCGGCAGGGATCATGAAGTGTAAATATGTTCAATTGTCCGCGGAATTCATCTATCCTTACAGAAATCAGGGTGGCTTTGACATGATTGCAAGCGGCAGAGACAAGATTGAAACTCCCGAACAGTTTAAGCTAGCAGAAGAAACAGTAAAGAAGTTTGATTTAGATGGGCTTGTAGTCATTGGCGGGGATGACTCAAATACCAATGCTTGCCTTCTAGCTGAACACTTCAGGGGTAAAAATATGAAGACACAGGTAATTGGATGTCCCAAAACCATTGATGGTGATCTGAAAAGCAAAGAGGTGCCCATAAGTTTTGGATTCGACACTGCATGCAAGCTATATTCAGAAATGATTGGTAACGTGATGATGGATGCCCGTTCAACTGGGAAGTACTACCACTTTGTAAGGCTTATGGGGCGTGCAGCTTCTCATATAACCTTGGAGTGTGCACTGCAGACTCGTCCAAACATCACGATTATTGGGGAAGAGGTTGCTGCCAAGAAGCAGACACTCAAGAGTGTAACAGACTATATAACAGATATAATCTGCAAACGTTCGGAACTTGGGTTTAATTATGGTGTCATTCTTATACCAGAAGGCCTGATTGATTTCATTCCAGAGGTGCAGCACCTAATTTCGGAGCTTAACGAAATCTTAGCTCATGATATTGTTGATGAAGCAGGGGTGTGGAAACAGAAACTCCAGAGCCAATCCCTAGAGCTTTTTGAGATTTTGCCGCAAACAATTCAGGAGCAACTACTGCTCGAAAGAGATCCACACGGGAATGTGCAGGTAAATTCTTTTGATTGTCGTATCTTTCTCCTTTATCCTTTGGACTATGTCCGAATATTGCATTTGTTGAATCTTAACATGATGTTAAGCATTTAG

Protein Analysis

421

Amino Acids

46.22

Weight (kDa)

6.03

Isoelectric Point (pI)

41.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PFK PF00365 86 - 328 1.9e-34 Phosphofructokinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1156
AccB1I GGYRCC 1 cut(s) 676
AccII CGCG 1 cut(s) 416
AciI CCGC 8 cut(s) 83, 147, 222, 414, 416, 468, 558, 1112
AclI AACGTT 1 cut(s) 928
AclWI GGATC 2 cut(s) 392, 1142
AcoI YGGCCR 1 cut(s) 215
AcsI RAATTY 2 cut(s) 419, 1171
AcuI CTGAAG 3 cut(s) 100, 125, 586
AfaI GTAC 2 cut(s) 5, 767
AfiI CCNNNNNNNGG 1 cut(s) 1012
AgsI TTSAA 5 cut(s) 256, 407, 485, 756, 1237
AhlI ACTAGT 1 cut(s) 341
AjnI CCWGG 3 cut(s) 28, 60, 217
AleI CACNNNNGTG 1 cut(s) 342
AluBI AGCT 9 cut(s) 111, 141, 505, 593, 712, 800, 1018, 1034, 1096
AluI AGCT 9 cut(s) 111, 141, 505, 593, 712, 800, 1018, 1034, 1096
Alw21I GWGCWC 2 cut(s) 113, 826
Alw26I GTCTC 3 cut(s) 46, 77, 468
Alw44I GTGCAC 1 cut(s) 822
AlwI GGATC 2 cut(s) 392, 1142
AlwNI CAGNNNCTG 1 cut(s) 29
AoxI GGCC 2 cut(s) 215, 973
ApaLI GTGCAC 1 cut(s) 822
ApeKI GCWGC 4 cut(s) 196, 797, 869, 1000
ApoI RAATTY 2 cut(s) 419, 1171
AspS9I GGNCC 2 cut(s) 58, 374
AsuC2I CCSGG 1 cut(s) 291
AsuHPI GGTGA 1 cut(s) 668
AsuII TTCGAA 1 cut(s) 239
AsuNHI GCTAGC 1 cut(s) 505
AvaII GGWCC 2 cut(s) 58, 374
BaeGI GKGCMC 2 cut(s) 681, 826
BanI GGYRCC 1 cut(s) 676
BanII GRGCYC 1 cut(s) 113
BbsI GAAGAC 1 cut(s) 626
Bbv12I GWGCWC 2 cut(s) 113, 826
BbvI GCAGC 4 cut(s) 208, 809, 856, 1012
BccI CCATC 4 cut(s) 122, 533, 647, 736
BceAI ACGGC 1 cut(s) 230
BcgI CGANNNNNNTGC 2 cut(s) 55, 89
BciT130I CCWGG 3 cut(s) 30, 62, 219
BciVI GTATCC 1 cut(s) 238
BcnI CCSGG 1 cut(s) 291
BcoDI GTCTC 3 cut(s) 46, 77, 468
BcuI ACTAGT 1 cut(s) 341
BfaI CTAG 4 cut(s) 342, 506, 590, 1091
BfmI CTRYAG 1 cut(s) 827
BfuAI ACCTGC 1 cut(s) 1156
BfuI GTATCC 1 cut(s) 238
BisI GCNGC 7 cut(s) 147, 197, 469, 798, 870, 1001, 1112
BlsI GCNGC 7 cut(s) 148, 198, 470, 799, 871, 1002, 1113
BmcAI AGTACT 1 cut(s) 767
Bme1390I CCNGG 4 cut(s) 30, 62, 219, 291
Bme18I GGWCC 2 cut(s) 58, 374
BmgT120I GGNCC 2 cut(s) 58, 374
BmiI GGNNCC 3 cut(s) 133, 288, 678
BmrFI CCNGG 4 cut(s) 30, 62, 219, 291
BmrI ACTGGG 1 cut(s) 768
BmsI GCATC 1 cut(s) 736
BmtI GCTAGC 1 cut(s) 509
BmuI ACTGGG 1 cut(s) 768
BpiI GAAGAC 1 cut(s) 626
BplI GAGNNNNNCTC 2 cut(s) 255, 287
BpmI CTGGAG 1 cut(s) 1061
Bpu14I TTCGAA 1 cut(s) 239
BpuEI CTTGAG 1 cut(s) 872
BpuMI CCSGG 1 cut(s) 291
BsaBI GATNNNNATC 1 cut(s) 657
BsaJI CCNNGG 3 cut(s) 61, 414, 813
BsaXI ACNNNNNCTCC 2 cut(s) 1059, 1089
Bsc4I CCNNNNNNNGG 1 cut(s) 1012
Bse1I ACTGG 1 cut(s) 763
Bse3DI GCAATG 1 cut(s) 213
Bse8I GATNNNNATC 1 cut(s) 657
BseBI CCWGG 3 cut(s) 30, 62, 219
BseDI CCNNGG 3 cut(s) 61, 414, 813
BseGI GGATG 3 cut(s) 568, 641, 751
BseJI GATNNNNATC 1 cut(s) 657
BseLI CCNNNNNNNGG 1 cut(s) 1012
BseMI GCAATG 1 cut(s) 213
BseMII CTCAG 1 cut(s) 288
BseNI ACTGG 1 cut(s) 763
BseSI GKGCMC 2 cut(s) 681, 826
BseXI GCAGC 4 cut(s) 208, 809, 856, 1012
BsgI GTGCAG 3 cut(s) 816, 1019, 1184
Bsh1236I CGCG 1 cut(s) 416
BshFI GGCC 2 cut(s) 217, 975
BshNI GGYRCC 1 cut(s) 676
BsiHKAI GWGCWC 2 cut(s) 113, 826
BsiSI CCGG 3 cut(s) 150, 291, 377
BslFI GGGAC 1 cut(s) 624
BslI CCNNNNNNNGG 1 cut(s) 1012
BsmAI GTCTC 3 cut(s) 46, 77, 468
BsmBI CGTCTC 2 cut(s) 46, 77
BsmFI GGGAC 1 cut(s) 624
BsnI GGCC 2 cut(s) 217, 975
Bsp119I TTCGAA 1 cut(s) 239
Bsp1286I GDGCHC 3 cut(s) 113, 681, 826
Bsp143I GATC 3 cut(s) 384, 658, 1147
BspACI CCGC 8 cut(s) 83, 147, 222, 414, 416, 468, 558, 1112
BspANI GGCC 2 cut(s) 217, 975
BspCNI CTCAG 1 cut(s) 287
BspFNI CGCG 1 cut(s) 416
BspHI TCATGA 2 cut(s) 387, 1036
BspLI GGNNCC 3 cut(s) 133, 288, 678
BspMAI CTGCAG 1 cut(s) 831
BspMI ACCTGC 1 cut(s) 1156
BspOI GCTAGC 1 cut(s) 509
BspPI GGATC 2 cut(s) 392, 1142
BspQI GCTCTTC 1 cut(s) 101
BspT104I TTCGAA 1 cut(s) 239
BspT107I GGYRCC 1 cut(s) 676
BsrDI GCAATG 1 cut(s) 213
BsrI ACTGG 1 cut(s) 763
BssECI CCNNGG 3 cut(s) 61, 414, 813
BssMI GATC 3 cut(s) 384, 658, 1147
BssT1I CCWWGG 1 cut(s) 813
Bst2UI CCWGG 3 cut(s) 30, 62, 219
Bst4CI ACNGT 2 cut(s) 498, 520
Bst6I CTCTTC 3 cut(s) 49, 101, 855
BstAPI GCANNNNNTGC 1 cut(s) 1135
BstBI TTCGAA 1 cut(s) 239
BstC8I GCNNGC 6 cut(s) 466, 507, 583, 706, 710, 795
BstDEI CTNAG 2 cut(s) 274, 1030
BstDSI CCRYGG 1 cut(s) 414
BstF5I GGATG 3 cut(s) 568, 641, 751
BstFNI CGCG 1 cut(s) 416
BstKTI GATC 3 cut(s) 387, 661, 1150
BstMAI GTCTC 3 cut(s) 46, 77, 468
BstMBI GATC 3 cut(s) 384, 658, 1147
BstMWI GCNNNNNNNGC 4 cut(s) 117, 138, 790, 1135
BstNI CCWGG 3 cut(s) 30, 62, 219
BstNSI RCATGY 1 cut(s) 708
BstSCI CCNGG 4 cut(s) 28, 60, 217, 289
BstSFI CTRYAG 1 cut(s) 827
BstSLI GKGCMC 2 cut(s) 681, 826
BstUI CGCG 1 cut(s) 416
BstV1I GCAGC 4 cut(s) 208, 809, 856, 1012
BstV2I GAAGAC 1 cut(s) 626
BstX2I RGATCY 1 cut(s) 1147
BstYI RGATCY 1 cut(s) 1147
BsuI GTATCC 1 cut(s) 238
BsuRI GGCC 2 cut(s) 217, 975
BtgI CCRYGG 1 cut(s) 414
BtsCI GGATG 3 cut(s) 568, 641, 751
BtsI GCAGTG 3 cut(s) 30, 699, 824
BtsIMutI CAGTG 3 cut(s) 30, 699, 824
BveI ACCTGC 1 cut(s) 1156
Cac8I GCNNGC 6 cut(s) 466, 507, 583, 706, 710, 795
CaiI CAGNNNCTG 1 cut(s) 29
CciI TCATGA 2 cut(s) 387, 1036
Cfr13I GGNCC 2 cut(s) 58, 374
Cfr42I CCGCGG 1 cut(s) 417
CseI GACGC 1 cut(s) 109
Csp6I GTAC 2 cut(s) 4, 766
CviAII CATG 6 cut(s) 10, 388, 457, 705, 1037, 1246
CviQI GTAC 2 cut(s) 4, 766
DdeI CTNAG 2 cut(s) 274, 1030
DpnI GATC 3 cut(s) 386, 660, 1149
DpnII GATC 3 cut(s) 384, 658, 1147
EaeI YGGCCR 1 cut(s) 215
Eam1104I CTCTTC 3 cut(s) 49, 101, 855
EarI CTCTTC 3 cut(s) 49, 101, 855
Ecl136II GAGCTC 1 cut(s) 111
Eco130I CCWWGG 1 cut(s) 813
Eco147I AGGCCT 1 cut(s) 975
Eco24I GRGCYC 1 cut(s) 113
Eco47I GGWCC 2 cut(s) 58, 374
Eco53kI GAGCTC 1 cut(s) 111
Eco57I CTGAAG 3 cut(s) 100, 125, 586
EcoICRI GAGCTC 1 cut(s) 111
EcoRI GAATTC 1 cut(s) 419
EcoRII CCWGG 3 cut(s) 28, 60, 217
EcoT14I CCWWGG 1 cut(s) 813
EcoT38I GRGCYC 1 cut(s) 113
ErhI CCWWGG 1 cut(s) 813
Esp3I CGTCTC 2 cut(s) 46, 77
FaeI CATG 6 cut(s) 13, 391, 460, 708, 1040, 1249
FalI AAGNNNNNCTT 2 cut(s) 98, 130
FaqI GGGAC 1 cut(s) 624
FatI CATG 6 cut(s) 9, 387, 456, 704, 1036, 1245
FauI CCCGC 1 cut(s) 551
Fnu4HI GCNGC 7 cut(s) 147, 197, 469, 798, 870, 1001, 1112
FokI GGATG 3 cut(s) 575, 648, 758
FriOI GRGCYC 1 cut(s) 113
Fsp4HI GCNGC 7 cut(s) 147, 197, 469, 798, 870, 1001, 1112
FspBI CTAG 4 cut(s) 342, 506, 590, 1091
GluI GCNGC 7 cut(s) 147, 197, 469, 798, 870, 1001, 1112
GsuI CTGGAG 1 cut(s) 1061
HaeIII GGCC 2 cut(s) 217, 975
HapII CCGG 3 cut(s) 150, 291, 377
HgaI GACGC 1 cut(s) 109
Hin1II CATG 6 cut(s) 13, 391, 460, 708, 1040, 1249
HinfI GANTC 4 cut(s) 566, 693, 832, 1237
HpaII CCGG 3 cut(s) 150, 291, 377
HphI GGTGA 1 cut(s) 668
Hpy166II GTNNAC 2 cut(s) 296, 824
Hpy188I TCNGA 6 cut(s) 105, 663, 721, 934, 1015, 1220
Hpy8I GTNNAC 2 cut(s) 296, 824
Hpy99I CGWCG 3 cut(s) 80, 125, 128
HpyAV CCTTC 6 cut(s) 105, 124, 210, 235, 596, 965
HpyCH4III ACNGT 2 cut(s) 498, 520
HpyCH4IV ACGT 3 cut(s) 78, 735, 928
HpyF10VI GCNNNNNNNGC 4 cut(s) 117, 138, 790, 1135
HpyF3I CTNAG 2 cut(s) 274, 1030
HpySE526I ACGT 3 cut(s) 78, 735, 928
Hsp92II CATG 6 cut(s) 13, 391, 460, 708, 1040, 1249
KspI CCGCGG 1 cut(s) 417
Kzo9I GATC 3 cut(s) 384, 658, 1147
LguI GCTCTTC 1 cut(s) 101
LmnI GCTCC 5 cut(s) 116, 137, 292, 1015, 1126
Lsp1109I GCAGC 4 cut(s) 208, 809, 856, 1012
LweI GCATC 1 cut(s) 736
MaeI CTAG 4 cut(s) 342, 506, 590, 1091
MaeII ACGT 3 cut(s) 78, 735, 928
MaeIII GTNAC 2 cut(s) 731, 895
MalI GATC 3 cut(s) 386, 660, 1149
MboI GATC 3 cut(s) 384, 658, 1147
MboII GAAGA 7 cut(s) 36, 118, 219, 268, 524, 631, 872
MfeI CAATTG 1 cut(s) 407
MflI RGATCY 1 cut(s) 1147
MhlI GDGCHC 3 cut(s) 113, 681, 826
MluCI AATT 7 cut(s) 407, 419, 630, 946, 1008, 1119, 1171
MlyI GAGTC 2 cut(s) 560, 826
MnlI CCTC 7 cut(s) 49, 99, 154, 272, 667, 856, 988
MseI TTAA 6 cut(s) 366, 501, 945, 1020, 1242, 1253
MslI CAYNNNNRTG 2 cut(s) 342, 1158
MspA1I CMGCKG 1 cut(s) 416
MspI CCGG 3 cut(s) 150, 291, 377
MspR9I CCNGG 4 cut(s) 30, 62, 219, 291
MunI CAATTG 1 cut(s) 407
MvaI CCWGG 3 cut(s) 30, 62, 219
MvnI CGCG 1 cut(s) 416
MwoI GCNNNNNNNGC 4 cut(s) 117, 138, 790, 1135
NciI CCSGG 1 cut(s) 291
NdeII GATC 3 cut(s) 384, 658, 1147
NheI GCTAGC 1 cut(s) 505
NlaIII CATG 6 cut(s) 13, 391, 460, 708, 1040, 1249
NlaIV GGNNCC 3 cut(s) 133, 288, 678
NspI RCATGY 1 cut(s) 708
NspV TTCGAA 1 cut(s) 239
OliI CACNNNNGTG 1 cut(s) 342
PaeI GCATGC 1 cut(s) 708
PagI TCATGA 2 cut(s) 387, 1036
PceI AGGCCT 1 cut(s) 975
PciSI GCTCTTC 1 cut(s) 101
PcsI WCGNNNNNNNCGW 2 cut(s) 236, 245
PfeI GAWTC 2 cut(s) 693, 1237
PflFI GACNNNGTC 1 cut(s) 1214
PkrI GCNGC 7 cut(s) 148, 198, 470, 799, 871, 1002, 1113
PleI GAGTC 2 cut(s) 560, 826
PpsI GAGTC 2 cut(s) 560, 826
Psp124BI GAGCTC 1 cut(s) 113
Psp1406I AACGTT 1 cut(s) 928
Psp6I CCWGG 3 cut(s) 28, 60, 217
PspGI CCWGG 3 cut(s) 28, 60, 217
PspN4I GGNNCC 3 cut(s) 133, 288, 678
PspPI GGNCC 2 cut(s) 58, 374
PstI CTGCAG 1 cut(s) 831
PstNI CAGNNNCTG 1 cut(s) 29
PsuI RGATCY 1 cut(s) 1147
PsyI GACNNNGTC 1 cut(s) 1214
RsaI GTAC 2 cut(s) 5, 767
RsaNI GTAC 2 cut(s) 4, 766
RseI CAYNNNNRTG 2 cut(s) 342, 1158
SacI GAGCTC 1 cut(s) 113
SacII CCGCGG 1 cut(s) 417
SapI GCTCTTC 1 cut(s) 101
SaqAI TTAA 6 cut(s) 366, 501, 945, 1020, 1242, 1253
SatI GCNGC 7 cut(s) 147, 197, 469, 798, 870, 1001, 1112
Sau3AI GATC 3 cut(s) 384, 658, 1147
Sau96I GGNCC 2 cut(s) 58, 374
ScaI AGTACT 1 cut(s) 767
SchI GAGTC 2 cut(s) 560, 826
ScrFI CCNGG 4 cut(s) 30, 62, 219, 291
SduI GDGCHC 3 cut(s) 113, 681, 826
SfaNI GCATC 1 cut(s) 736
SfcI CTRYAG 1 cut(s) 827
Sfr303I CCGCGG 1 cut(s) 417
SfuI TTCGAA 1 cut(s) 239
SgrBI CCGCGG 1 cut(s) 417
SinI GGWCC 2 cut(s) 58, 374
SmiMI CAYNNNNRTG 2 cut(s) 342, 1158
SmlI CTYRAG 1 cut(s) 887
SmoI CTYRAG 1 cut(s) 887
SpeI ACTAGT 1 cut(s) 341
SphI GCATGC 1 cut(s) 708
Sse9I AATT 7 cut(s) 407, 419, 630, 946, 1008, 1119, 1171
SseBI AGGCCT 1 cut(s) 975
SsiI CCGC 8 cut(s) 83, 147, 222, 414, 416, 468, 558, 1112
SspI AATATT 1 cut(s) 1224
SspMI CTAG 4 cut(s) 342, 506, 590, 1091
SstI GAGCTC 1 cut(s) 113
StuI AGGCCT 1 cut(s) 975
StyD4I CCNGG 4 cut(s) 28, 60, 217, 289
StyI CCWWGG 1 cut(s) 813
TaaI ACNGT 2 cut(s) 498, 520
TaiI ACGT 3 cut(s) 81, 738, 931
TaqI TCGA 5 cut(s) 75, 126, 239, 696, 1140
TasI AATT 7 cut(s) 407, 419, 630, 946, 1008, 1119, 1171
TatI WGTACW 2 cut(s) 3, 765
TauI GCSGC 3 cut(s) 149, 471, 1114
TfiI GAWTC 2 cut(s) 693, 1237
Tru1I TTAA 6 cut(s) 366, 501, 945, 1020, 1242, 1253
Tru9I TTAA 6 cut(s) 366, 501, 945, 1020, 1242, 1253
TscAI CASTG 3 cut(s) 30, 706, 831
TseI GCWGC 4 cut(s) 196, 797, 869, 1000
TspDTI ATGAA 7 cut(s) 26, 36, 404, 412, 632, 976, 1065
TspRI CASTG 3 cut(s) 30, 706, 831
Tth111I GACNNNGTC 1 cut(s) 1214
VneI GTGCAC 1 cut(s) 822
VpaK11BI GGWCC 2 cut(s) 58, 374
XapI RAATTY 2 cut(s) 419, 1171
XceI RCATGY 1 cut(s) 708
XspI CTAG 4 cut(s) 342, 506, 590, 1091
ZrmI AGTACT 1 cut(s) 767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.