pycom09g07460

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
N/A
Physical Location & Seq
Reverse (-)
5661295 .. 5661966
672 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 582 bp
ATGTTAGTAACGAGTGTGAGAATATCTACTTTGTTTCTTCTCATTCTTCTTCTAAGCAGCCAGCAATCCCTTTCCAATCCTGCTTTAGTCCTCCCCACTTTATTGATAATCCCCACCTACTCTCTCTCTCTCCTCTTCCTTCACAACCCAATTCCCAGTTCTTCTTCTCCAAACATGGAACCCATGCTACAGCACCAGCAATCAGCAGGAGCGGCCCGGTTCACTCTGATGAGGCAGTCGTCGCTGGCGCCGGACCGGGACGACTCGGTGACGCCGGAGCCGGTTGACCCTCGCGTGAGGCTCTTGTACATGGCCAACGAGGGCAACTTGGACTCCATTCGGGAGCTCCTCGACTCCGGCATCGATGTCAACTTCACTGACATCGACGGTCGCACCGCCCTCCACGTCGCCGCTTGCCAGGGCCAAACCGACGTCGTTCAGCTCTTGCTCCAAAAAGGCGCCGATGTCGACCCGCGTGACCGCTGGGGCAGCACGGTTGCTAACAGTGTAGTGACTCTGGGAGTGATTTATTCGTTGAACAGCCTTTTGCGGATGCAATGTATTACAAAAACGATGACGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 Pkinase_Tyr

Protein Analysis

194

Amino Acids

21.1

Weight (kDa)

5.21

Isoelectric Point (pI)

42.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 101 - 160 3.9e-13 Ankyrin repeats (3 copies)
Ank_4 PF13637 103 - 150 3.9e-10 Ankyrin repeats (many copies)
Ank PF00023 129 - 160 1.4e-10 Ankyrin repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 435
AccB1I GGYRCC 2 cut(s) 247, 458
AccBSI CCGCTC 1 cut(s) 212
AccI GTMKAC 1 cut(s) 468
AccII CGCG 2 cut(s) 294, 475
AciI CCGC 6 cut(s) 212, 396, 411, 473, 481, 550
AcoI YGGCCR 1 cut(s) 312
AcyI GRCGYC 4 cut(s) 248, 272, 432, 459
AfaI GTAC 1 cut(s) 308
AgsI TTSAA 1 cut(s) 538
AjiI CACGTC 2 cut(s) 406, 579
AjnI CCWGG 1 cut(s) 417
AjuI GAANNNNNNNTTGG 2 cut(s) 142, 174
AluBI AGCT 2 cut(s) 346, 442
AluI AGCT 2 cut(s) 346, 442
Alw21I GWGCWC 1 cut(s) 348
AoxI GGCC 3 cut(s) 213, 312, 421
ApeKI GCWGC 2 cut(s) 57, 489
AspLEI GCGC 2 cut(s) 250, 461
AspS9I GGNCC 3 cut(s) 214, 253, 421
AsuC2I CCSGG 2 cut(s) 217, 257
AsuHPI GGTGA 1 cut(s) 280
AvaII GGWCC 1 cut(s) 253
BalI TGGCCA 1 cut(s) 314
BanI GGYRCC 2 cut(s) 247, 458
BanII GRGCYC 1 cut(s) 348
Bbv12I GWGCWC 1 cut(s) 348
BbvI GCAGC 2 cut(s) 69, 501
BciT130I CCWGG 1 cut(s) 419
BcnI CCSGG 2 cut(s) 217, 257
BfmI CTRYAG 1 cut(s) 188
BfoI RGCGCY 2 cut(s) 251, 462
BisI GCNGC 4 cut(s) 58, 213, 411, 490
BlsI GCNGC 4 cut(s) 59, 214, 412, 491
Bme1390I CCNGG 3 cut(s) 217, 257, 419
Bme18I GGWCC 1 cut(s) 253
BmgBI CACGTC 2 cut(s) 406, 579
BmgT120I GGNCC 3 cut(s) 214, 253, 421
BmiI GGNNCC 4 cut(s) 180, 249, 279, 460
BmrFI CCNGG 3 cut(s) 217, 257, 419
BmrI ACTGGG 1 cut(s) 150
BmsI GCATC 2 cut(s) 369, 543
BmuI ACTGGG 1 cut(s) 150
BpuMI CCSGG 2 cut(s) 217, 257
Bsa29I ATCGAT 1 cut(s) 363
BsaHI GRCGYC 4 cut(s) 248, 272, 432, 459
BsaJI CCNNGG 1 cut(s) 418
BsaXI ACNNNNNCTCC 2 cut(s) 317, 347
Bse118I RCCGGY 1 cut(s) 280
Bse1I ACTGG 1 cut(s) 156
Bse3DI GCAATG 1 cut(s) 563
BseBI CCWGG 1 cut(s) 419
BseCI ATCGAT 1 cut(s) 363
BseDI CCNNGG 1 cut(s) 418
BseGI GGATG 1 cut(s) 558
BseMI GCAATG 1 cut(s) 563
BseNI ACTGG 1 cut(s) 156
BseRI GAGGAG 2 cut(s) 122, 338
BseXI GCAGC 2 cut(s) 69, 501
BseYI CCCAGC 1 cut(s) 483
Bsh1236I CGCG 2 cut(s) 294, 475
Bsh1285I CGRYCG 1 cut(s) 391
BshFI GGCC 3 cut(s) 215, 314, 423
BshNI GGYRCC 2 cut(s) 247, 458
BshVI ATCGAT 1 cut(s) 363
BsiEI CGRYCG 1 cut(s) 391
BsiHKAI GWGCWC 1 cut(s) 348
BsiSI CCGG 6 cut(s) 217, 251, 256, 275, 281, 357
BslFI GGGAC 1 cut(s) 272
BsmFI GGGAC 1 cut(s) 272
BsnI GGCC 3 cut(s) 215, 314, 423
Bsp1286I GDGCHC 1 cut(s) 348
Bsp1407I TGTACA 1 cut(s) 306
BspACI CCGC 6 cut(s) 212, 396, 411, 473, 481, 550
BspANI GGCC 3 cut(s) 215, 314, 423
BspDI ATCGAT 1 cut(s) 363
BspFNI CGCG 2 cut(s) 294, 475
BspLI GGNNCC 4 cut(s) 180, 249, 279, 460
BspT107I GGYRCC 2 cut(s) 247, 458
BsrBI CCGCTC 1 cut(s) 212
BsrDI GCAATG 1 cut(s) 563
BsrFI RCCGGY 1 cut(s) 280
BsrGI TGTACA 1 cut(s) 306
BsrI ACTGG 1 cut(s) 156
BssAI RCCGGY 1 cut(s) 280
BssECI CCNNGG 1 cut(s) 418
BssNI GRCGYC 4 cut(s) 248, 272, 432, 459
Bst2UI CCWGG 1 cut(s) 419
Bst4CI ACNGT 3 cut(s) 389, 496, 506
Bst6I CTCTTC 1 cut(s) 140
BstACI GRCGYC 4 cut(s) 248, 272, 432, 459
BstAUI TGTACA 1 cut(s) 306
BstC8I GCNNGC 3 cut(s) 62, 246, 415
BstDEI CTNAG 1 cut(s) 53
BstF5I GGATG 1 cut(s) 558
BstFNI CGCG 2 cut(s) 294, 475
BstH2I RGCGCY 2 cut(s) 251, 462
BstHHI GCGC 2 cut(s) 250, 461
BstMCI CGRYCG 1 cut(s) 391
BstMWI GCNNNNNNNGC 3 cut(s) 212, 241, 489
BstNI CCWGG 1 cut(s) 419
BstSCI CCNGG 3 cut(s) 215, 255, 417
BstSFI CTRYAG 1 cut(s) 188
BstUI CGCG 2 cut(s) 294, 475
BstV1I GCAGC 2 cut(s) 69, 501
Bsu15I ATCGAT 1 cut(s) 363
BsuRI GGCC 3 cut(s) 215, 314, 423
BsuTUI ATCGAT 1 cut(s) 363
BtrI CACGTC 2 cut(s) 406, 579
BtsCI GGATG 1 cut(s) 558
BtsIMutI CAGTG 2 cut(s) 375, 511
Cac8I GCNNGC 3 cut(s) 62, 246, 415
CfoI GCGC 2 cut(s) 250, 461
Cfr10I RCCGGY 1 cut(s) 280
Cfr13I GGNCC 3 cut(s) 214, 253, 421
ClaI ATCGAT 1 cut(s) 363
CpoI CGGWCCG 1 cut(s) 253
CseI GACGC 1 cut(s) 280
Csp6I GTAC 1 cut(s) 307
CspI CGGWCCG 1 cut(s) 253
CviAII CATG 3 cut(s) 175, 184, 310
CviJI RGCY 9 cut(s) 60, 215, 280, 301, 314, 346, 423, 442, 543
CviKI_1 RGCY 9 cut(s) 60, 215, 280, 301, 314, 346, 423, 442, 543
CviQI GTAC 1 cut(s) 307
DdeI CTNAG 1 cut(s) 53
DinI GGCGCC 2 cut(s) 249, 460
EaeI YGGCCR 1 cut(s) 312
Eam1104I CTCTTC 1 cut(s) 140
EarI CTCTTC 1 cut(s) 140
Ecl136II GAGCTC 1 cut(s) 346
Eco24I GRGCYC 1 cut(s) 348
Eco47I GGWCC 1 cut(s) 253
Eco53kI GAGCTC 1 cut(s) 346
EcoICRI GAGCTC 1 cut(s) 346
EcoRII CCWGG 1 cut(s) 417
EcoT38I GRGCYC 1 cut(s) 348
EgeI GGCGCC 2 cut(s) 249, 460
EheI GGCGCC 2 cut(s) 249, 460
FaeI CATG 3 cut(s) 178, 187, 313
FaiI YATR 3 cut(s) 176, 185, 311
FaqI GGGAC 1 cut(s) 272
FatI CATG 3 cut(s) 174, 183, 309
FauI CCCGC 1 cut(s) 480
FblI GTMKAC 1 cut(s) 468
Fnu4HI GCNGC 4 cut(s) 58, 213, 411, 490
FokI GGATG 1 cut(s) 565
FriOI GRGCYC 1 cut(s) 348
Fsp4HI GCNGC 4 cut(s) 58, 213, 411, 490
GlaI GCGC 2 cut(s) 249, 460
GluI GCNGC 4 cut(s) 58, 213, 411, 490
GsaI CCCAGC 1 cut(s) 487
HaeII RGCGCY 2 cut(s) 251, 462
HaeIII GGCC 3 cut(s) 215, 314, 423
HapII CCGG 6 cut(s) 217, 251, 256, 275, 281, 357
HgaI GACGC 1 cut(s) 280
HhaI GCGC 2 cut(s) 250, 461
Hin1I GRCGYC 4 cut(s) 248, 272, 432, 459
Hin1II CATG 3 cut(s) 178, 187, 313
Hin6I GCGC 2 cut(s) 248, 459
HinP1I GCGC 2 cut(s) 248, 459
HincII GTYRAC 3 cut(s) 286, 370, 469
HindII GTYRAC 3 cut(s) 286, 370, 469
HinfI GANTC 4 cut(s) 263, 332, 353, 514
HpaII CCGG 6 cut(s) 217, 251, 256, 275, 281, 357
HphI GGTGA 1 cut(s) 280
Hpy166II GTNNAC 4 cut(s) 222, 286, 370, 469
Hpy188I TCNGA 1 cut(s) 228
Hpy188III TCNNGA 1 cut(s) 341
Hpy8I GTNNAC 4 cut(s) 222, 286, 370, 469
Hpy99I CGWCG 5 cut(s) 244, 389, 410, 434, 437
HpyAV CCTTC 1 cut(s) 149
HpyCH4III ACNGT 3 cut(s) 389, 496, 506
HpyCH4IV ACGT 3 cut(s) 405, 432, 578
HpyCH4V TGCA 1 cut(s) 556
HpyF10VI GCNNNNNNNGC 3 cut(s) 212, 241, 489
HpyF3I CTNAG 1 cut(s) 53
HpySE526I ACGT 3 cut(s) 405, 432, 578
Hsp92I GRCGYC 4 cut(s) 248, 272, 432, 459
Hsp92II CATG 3 cut(s) 178, 187, 313
HspAI GCGC 2 cut(s) 248, 459
KasI GGCGCC 2 cut(s) 247, 458
LmnI GCTCC 5 cut(s) 209, 277, 343, 351, 453
Lsp1109I GCAGC 2 cut(s) 69, 501
LweI GCATC 2 cut(s) 369, 543
MaeII ACGT 3 cut(s) 405, 432, 578
MaeIII GTNAC 4 cut(s) 7, 268, 476, 511
MbiI CCGCTC 1 cut(s) 212
MboII GAAGA 6 cut(s) 29, 38, 41, 127, 153, 156
MhlI GDGCHC 1 cut(s) 348
MlsI TGGCCA 1 cut(s) 314
MluCI AATT 1 cut(s) 150
MluNI TGGCCA 1 cut(s) 314
Mly113I GGCGCC 2 cut(s) 248, 459
MlyI GAGTC 4 cut(s) 257, 326, 347, 508
MnlI CCTC 8 cut(s) 101, 143, 225, 291, 300, 313, 359, 410
Mox20I TGGCCA 1 cut(s) 314
MscI TGGCCA 1 cut(s) 314
MslI CAYNNNNRTG 1 cut(s) 227
Msp20I TGGCCA 1 cut(s) 314
MspA1I CMGCKG 1 cut(s) 483
MspI CCGG 6 cut(s) 217, 251, 256, 275, 281, 357
MspR9I CCNGG 3 cut(s) 217, 257, 419
MvaI CCWGG 1 cut(s) 419
MvnI CGCG 2 cut(s) 294, 475
MwoI GCNNNNNNNGC 3 cut(s) 212, 241, 489
NarI GGCGCC 2 cut(s) 248, 459
NciI CCSGG 2 cut(s) 217, 257
NlaIII CATG 3 cut(s) 178, 187, 313
NlaIV GGNNCC 4 cut(s) 180, 249, 279, 460
NmuCI GTSAC 3 cut(s) 268, 476, 511
PkrI GCNGC 4 cut(s) 59, 214, 412, 491
PleI GAGTC 4 cut(s) 257, 326, 347, 508
PluTI GGCGCC 2 cut(s) 251, 462
PpsI GAGTC 4 cut(s) 257, 326, 347, 508
Psp124BI GAGCTC 1 cut(s) 348
Psp6I CCWGG 1 cut(s) 417
PspFI CCCAGC 1 cut(s) 483
PspGI CCWGG 1 cut(s) 417
PspN4I GGNNCC 4 cut(s) 180, 249, 279, 460
PspPI GGNCC 3 cut(s) 214, 253, 421
PsrI GAACNNNNNNTAC 2 cut(s) 171, 203
RsaI GTAC 1 cut(s) 308
RsaNI GTAC 1 cut(s) 307
RseI CAYNNNNRTG 1 cut(s) 227
Rsr2I CGGWCCG 1 cut(s) 253
RsrII CGGWCCG 1 cut(s) 253
SacI GAGCTC 1 cut(s) 348
SalI GTCGAC 1 cut(s) 467
SatI GCNGC 4 cut(s) 58, 213, 411, 490
Sau96I GGNCC 3 cut(s) 214, 253, 421
SchI GAGTC 4 cut(s) 257, 326, 347, 508
ScrFI CCNGG 3 cut(s) 217, 257, 419
SduI GDGCHC 1 cut(s) 348
SetI ASST 6 cut(s) 119, 348, 408, 435, 444, 581
SfaNI GCATC 2 cut(s) 369, 543
SfcI CTRYAG 1 cut(s) 188
SfoI GGCGCC 2 cut(s) 249, 460
SinI GGWCC 1 cut(s) 253
SmiMI CAYNNNNRTG 1 cut(s) 227
Sse9I AATT 1 cut(s) 150
SsiI CCGC 6 cut(s) 212, 396, 411, 473, 481, 550
SspDI GGCGCC 2 cut(s) 247, 458
SstI GAGCTC 1 cut(s) 348
StyD4I CCNGG 3 cut(s) 215, 255, 417
TaaI ACNGT 3 cut(s) 389, 496, 506
TaiI ACGT 3 cut(s) 408, 435, 581
TaqI TCGA 4 cut(s) 351, 363, 384, 468
TasI AATT 1 cut(s) 150
TatI WGTACW 1 cut(s) 306
TauI GCSGC 2 cut(s) 215, 413
TscAI CASTG 2 cut(s) 382, 511
TseFI GTSAC 3 cut(s) 268, 476, 511
TseI GCWGC 2 cut(s) 57, 489
Tsp45I GTSAC 3 cut(s) 268, 476, 511
TspRI CASTG 2 cut(s) 382, 511
VpaK11BI GGWCC 1 cut(s) 253
XmiI GTMKAC 1 cut(s) 468
ZraI GACGTC 1 cut(s) 433
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.