pycom09g08040

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
N/A
Physical Location & Seq
Reverse (-)
6158311 .. 6158611
301 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 246 bp
ATGGCTCCTGCTCAGGTTCTACCTCCAATACCCATACTTGTTCATCGTTTGGTTTTACACTTTCATAAGCTGGAATCATATCATATCTCTTTGGGGAGGAGAAATCAAGTTGCTGCAACATATATTAATTACATTCAAAATTATGAAGTGTTGAGCAGAAATTTTGTTGTAGTCGATCTTTTTCGTCATCATGCCAAAGTGAGAGTTACCTTGGCAAATATGAGAGCCATACTAGAATGTATTTAA

Protein Analysis

82

Amino Acids

9.43

Weight (kDa)

10.01

Isoelectric Point (pI)

45.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 160
AgsI TTSAA 1 cut(s) 137
AluBI AGCT 1 cut(s) 70
AluI AGCT 1 cut(s) 70
ApeKI GCWGC 1 cut(s) 113
ApoI RAATTY 1 cut(s) 160
AseI ATTAAT 1 cut(s) 126
BbvI GCAGC 1 cut(s) 100
BfaI CTAG 1 cut(s) 233
BisI GCNGC 1 cut(s) 114
BlsI GCNGC 1 cut(s) 115
BmiI GGNNCC 1 cut(s) 6
Bpu10I CCTNAGC 1 cut(s) 12
BsaJI CCNNGG 1 cut(s) 210
BseDI CCNNGG 1 cut(s) 210
BseMII CTCAG 1 cut(s) 26
BseRI GAGGAG 1 cut(s) 112
BseXI GCAGC 1 cut(s) 100
Bsp143I GATC 1 cut(s) 175
BspCNI CTCAG 1 cut(s) 25
BspLI GGNNCC 1 cut(s) 6
BssECI CCNNGG 1 cut(s) 210
BssMI GATC 1 cut(s) 175
BssT1I CCWWGG 1 cut(s) 210
BstDEI CTNAG 1 cut(s) 12
BstKTI GATC 1 cut(s) 178
BstMBI GATC 1 cut(s) 175
BstV1I GCAGC 1 cut(s) 100
CviAII CATG 1 cut(s) 191
CviJI RGCY 3 cut(s) 5, 70, 227
CviKI_1 RGCY 3 cut(s) 5, 70, 227
DdeI CTNAG 1 cut(s) 12
DpnI GATC 1 cut(s) 177
DpnII GATC 1 cut(s) 175
Eco130I CCWWGG 1 cut(s) 210
EcoT14I CCWWGG 1 cut(s) 210
ErhI CCWWGG 1 cut(s) 210
FaeI CATG 1 cut(s) 194
FatI CATG 1 cut(s) 190
Fnu4HI GCNGC 1 cut(s) 114
Fsp4HI GCNGC 1 cut(s) 114
FspBI CTAG 1 cut(s) 233
GluI GCNGC 1 cut(s) 114
Hin1II CATG 1 cut(s) 194
HinfI GANTC 1 cut(s) 74
HpyCH4V TGCA 1 cut(s) 116
HpyF3I CTNAG 1 cut(s) 12
Hsp92II CATG 1 cut(s) 194
Kzo9I GATC 1 cut(s) 175
LmnI GCTCC 1 cut(s) 10
LpnPI CCDG 2 cut(s) 21, 56
Lsp1109I GCAGC 1 cut(s) 100
MaeI CTAG 1 cut(s) 233
MaeIII GTNAC 1 cut(s) 205
MalI GATC 1 cut(s) 177
MboI GATC 1 cut(s) 175
MluCI AATT 3 cut(s) 127, 139, 160
MnlI CCTC 2 cut(s) 33, 90
MseI TTAA 2 cut(s) 126, 244
NdeII GATC 1 cut(s) 175
NlaIII CATG 1 cut(s) 194
NlaIV GGNNCC 1 cut(s) 6
PfeI GAWTC 1 cut(s) 74
PkrI GCNGC 1 cut(s) 115
PshBI ATTAAT 1 cut(s) 126
PspN4I GGNNCC 1 cut(s) 6
SaqAI TTAA 2 cut(s) 126, 244
SatI GCNGC 1 cut(s) 114
Sau3AI GATC 1 cut(s) 175
SetI ASST 4 cut(s) 18, 25, 72, 212
SgeI CNNG 7 cut(s) 20, 26, 50, 83, 119, 203, 223
Sse9I AATT 3 cut(s) 127, 139, 160
SspMI CTAG 1 cut(s) 233
StyI CCWWGG 1 cut(s) 210
TaqI TCGA 1 cut(s) 174
TasI AATT 3 cut(s) 127, 139, 160
TfiI GAWTC 1 cut(s) 74
Tru1I TTAA 2 cut(s) 126, 244
Tru9I TTAA 2 cut(s) 126, 244
TseI GCWGC 1 cut(s) 113
TspDTI ATGAA 3 cut(s) 32, 53, 159
VspI ATTAAT 1 cut(s) 126
XapI RAATTY 1 cut(s) 160
XspI CTAG 1 cut(s) 233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.