pycom09g09200

ATP-citrate synthase alpha chain protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
N/A
Physical Location & Seq
Reverse (-)
7349518 .. 7355286
5769 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 183 bp
ATGCCCATCAATCTCTCTTCCCTTTCTCTCACTTGGTCTCTCCCCTTGTTCATGCCCATTTATCTGCATCATCATCCTTCCCGGTCTCGTCGTTTCGAGTCTCGACAACAAAGGGTTGAGATGGGTGGCTGCAAAGGACCCATAACAACATTCATTGTTGAACCCTTCATTCCCCCACAATGA

Protein Analysis

61

Amino Acids

6.96

Weight (kDa)

10.03

Isoelectric Point (pI)

80.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 161
Alw26I GTCTC 3 cut(s) 42, 90, 105
ApeKI GCWGC 1 cut(s) 129
AspS9I GGNCC 1 cut(s) 137
AsuC2I CCSGG 1 cut(s) 82
AvaII GGWCC 1 cut(s) 137
BbvI GCAGC 1 cut(s) 116
BccI CCATC 2 cut(s) 14, 115
BcnI CCSGG 1 cut(s) 82
BcoDI GTCTC 3 cut(s) 42, 90, 105
BisI GCNGC 1 cut(s) 130
BlsI GCNGC 1 cut(s) 131
Bme1390I CCNGG 1 cut(s) 82
Bme18I GGWCC 1 cut(s) 137
BmgT120I GGNCC 1 cut(s) 137
BmiI GGNNCC 1 cut(s) 139
BmrFI CCNGG 1 cut(s) 82
BmsI GCATC 1 cut(s) 76
BpuMI CCSGG 1 cut(s) 82
BsaI GGTCTC 2 cut(s) 42, 90
BseGI GGATG 1 cut(s) 73
BseXI GCAGC 1 cut(s) 116
BsiSI CCGG 1 cut(s) 82
BsmAI GTCTC 3 cut(s) 42, 90, 105
Bso31I GGTCTC 2 cut(s) 42, 90
BspLI GGNNCC 1 cut(s) 139
BspTNI GGTCTC 2 cut(s) 42, 90
Bst6I CTCTTC 1 cut(s) 22
BstF5I GGATG 1 cut(s) 73
BstMAI GTCTC 3 cut(s) 42, 90, 105
BstSCI CCNGG 1 cut(s) 80
BstV1I GCAGC 1 cut(s) 116
BtsCI GGATG 1 cut(s) 73
Cfr13I GGNCC 1 cut(s) 137
CviAII CATG 1 cut(s) 52
CviJI RGCY 1 cut(s) 129
CviKI_1 RGCY 1 cut(s) 129
Eam1104I CTCTTC 1 cut(s) 22
EarI CTCTTC 1 cut(s) 22
Eco31I GGTCTC 2 cut(s) 42, 90
Eco47I GGWCC 1 cut(s) 137
EcoO109I RGGNCCY 1 cut(s) 137
FaeI CATG 1 cut(s) 55
FaiI YATR 2 cut(s) 53, 143
FatI CATG 1 cut(s) 51
Fnu4HI GCNGC 1 cut(s) 130
FokI GGATG 1 cut(s) 60
Fsp4HI GCNGC 1 cut(s) 130
GluI GCNGC 1 cut(s) 130
HapII CCGG 1 cut(s) 82
Hin1II CATG 1 cut(s) 55
HinfI GANTC 1 cut(s) 98
HpaII CCGG 1 cut(s) 82
Hpy188III TCNNGA 1 cut(s) 102
Hpy99I CGWCG 1 cut(s) 93
HpyAV CCTTC 2 cut(s) 87, 175
HpyCH4V TGCA 2 cut(s) 67, 132
Hsp92II CATG 1 cut(s) 55
LpnPI CCDG 1 cut(s) 95
Lsp1109I GCAGC 1 cut(s) 116
LweI GCATC 1 cut(s) 76
MboII GAAGA 1 cut(s) 9
MlyI GAGTC 1 cut(s) 107
MspI CCGG 1 cut(s) 82
MspR9I CCNGG 1 cut(s) 82
NciI CCSGG 1 cut(s) 82
NlaIII CATG 1 cut(s) 55
NlaIV GGNNCC 1 cut(s) 139
PkrI GCNGC 1 cut(s) 131
PleI GAGTC 1 cut(s) 106
PpsI GAGTC 1 cut(s) 106
PpuMI RGGWCCY 1 cut(s) 137
Psp5II RGGWCCY 1 cut(s) 137
PspN4I GGNNCC 1 cut(s) 139
PspPI GGNCC 1 cut(s) 137
PspPPI RGGWCCY 1 cut(s) 137
SatI GCNGC 1 cut(s) 130
Sau96I GGNCC 1 cut(s) 137
SchI GAGTC 1 cut(s) 107
ScrFI CCNGG 1 cut(s) 82
SfaNI GCATC 1 cut(s) 76
SgeI CNNG 8 cut(s) 45, 58, 64, 93, 94, 99, 109, 114
SinI GGWCC 1 cut(s) 137
StyD4I CCNGG 1 cut(s) 80
TaqI TCGA 2 cut(s) 96, 103
TseI GCWGC 1 cut(s) 129
TspDTI ATGAA 3 cut(s) 40, 142, 157
VpaK11BI GGWCC 1 cut(s) 137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.