pycom09g09860

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
N/A
Physical Location & Seq
Reverse (-)
7982789 .. 7983466
678 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 465 bp
ATGCCCTACAGCCCTAGGATTTCTGAAACTTGTAGGAAAGTTCGACACAAGAATGTTGTACAATTCATTGGTGCGTGTACCAAGCATCCAAGTTTGTGCATTGTAACAGAATATATGTCCGGTGGAAGTGTGTATGACTACTTGCATAAGCAAAAGGGAGTTTTAAAGCTTCCATCCTTGCTCAAGGTCGCAATTGATGTTTCCAAAGGAATGACCTACTTGCATCAAAATAACATAATCCACAGGGATTTAAAAGCCGCCAATCTCTTGATGGATGAAAATGAAGTAAGAGACCCTCATGATACTTTAATCAAGTTAGAAAACCTTTTTGATATATGCATCACTTTACAGGTTGTTAAGGTTGCTGATTTCGGGGTTGCTAGAGTAAAATCTCAATCTGGAGTAATGACAGCAGAAACTGGGACTTATAGGTGGATGGCTCCAGAGGTCTGTACTTCCACTTGA

Protein Analysis

155

Amino Acids

17.31

Weight (kDa)

8.8

Isoelectric Point (pI)

47.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 10 - 152 1.7e-34 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 11 - 151 1.7e-30 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 258
AfaI GTAC 3 cut(s) 60, 79, 454
AluBI AGCT 1 cut(s) 169
AluI AGCT 1 cut(s) 169
Alw26I GTCTC 1 cut(s) 285
AlwNI CAGNNNCTG 1 cut(s) 419
AspA2I CCTAGG 1 cut(s) 14
AvrII CCTAGG 1 cut(s) 14
BccI CCATC 3 cut(s) 181, 265, 430
BcoDI GTCTC 1 cut(s) 285
BfaI CTAG 2 cut(s) 15, 381
BfmI CTRYAG 1 cut(s) 7
BisI GCNGC 1 cut(s) 258
BlnI CCTAGG 1 cut(s) 14
BlsI GCNGC 1 cut(s) 259
BmiI GGNNCC 1 cut(s) 441
BmrI ACTGGG 1 cut(s) 429
BmsI GCATC 3 cut(s) 94, 232, 348
BmuI ACTGGG 1 cut(s) 429
BpmI CTGGAG 2 cut(s) 420, 426
BpuEI CTTGAG 1 cut(s) 167
BsaI GGTCTC 1 cut(s) 285
BsaJI CCNNGG 1 cut(s) 14
BsaWI WCCGGW 1 cut(s) 119
Bse1I ACTGG 1 cut(s) 424
BseDI CCNNGG 1 cut(s) 14
BseGI GGATG 4 cut(s) 85, 173, 280, 441
BseNI ACTGG 1 cut(s) 424
BsiSI CCGG 1 cut(s) 120
BslFI GGGAC 1 cut(s) 436
BsmAI GTCTC 1 cut(s) 285
BsmFI GGGAC 1 cut(s) 436
Bso31I GGTCTC 1 cut(s) 285
Bsp1407I TGTACA 1 cut(s) 58
BspACI CCGC 1 cut(s) 258
BspHI TCATGA 1 cut(s) 298
BspLI GGNNCC 1 cut(s) 441
BspTNI GGTCTC 1 cut(s) 285
BsrGI TGTACA 1 cut(s) 58
BsrI ACTGG 1 cut(s) 424
BssECI CCNNGG 1 cut(s) 14
BssT1I CCWWGG 1 cut(s) 14
BstAUI TGTACA 1 cut(s) 58
BstF5I GGATG 4 cut(s) 85, 173, 280, 441
BstMAI GTCTC 1 cut(s) 285
BstSFI CTRYAG 1 cut(s) 7
BtsCI GGATG 4 cut(s) 85, 173, 280, 441
CaiI CAGNNNCTG 1 cut(s) 419
CciI TCATGA 1 cut(s) 298
Csp6I GTAC 3 cut(s) 59, 78, 453
CviAII CATG 1 cut(s) 299
CviJI RGCY 4 cut(s) 12, 169, 257, 440
CviKI_1 RGCY 4 cut(s) 12, 169, 257, 440
CviQI GTAC 3 cut(s) 59, 78, 453
DraI TTTAAA 2 cut(s) 165, 252
Eco130I CCWWGG 1 cut(s) 14
Eco31I GGTCTC 1 cut(s) 285
EcoT14I CCWWGG 1 cut(s) 14
EcoT22I ATGCAT 1 cut(s) 341
ErhI CCWWGG 1 cut(s) 14
FaeI CATG 1 cut(s) 302
FaiI YATR 9 cut(s) 114, 116, 135, 147, 236, 300, 335, 337, 429
FaqI GGGAC 1 cut(s) 436
FatI CATG 1 cut(s) 298
Fnu4HI GCNGC 1 cut(s) 258
FokI GGATG 4 cut(s) 72, 160, 287, 448
Fsp4HI GCNGC 1 cut(s) 258
FspBI CTAG 2 cut(s) 15, 381
GluI GCNGC 1 cut(s) 258
GsuI CTGGAG 2 cut(s) 420, 426
HapII CCGG 1 cut(s) 120
Hin1II CATG 1 cut(s) 302
HindIII AAGCTT 1 cut(s) 167
HpaII CCGG 1 cut(s) 120
Hpy166II GTNNAC 1 cut(s) 78
Hpy188I TCNGA 1 cut(s) 25
Hpy188III TCNNGA 4 cut(s) 268, 299, 399, 443
Hpy8I GTNNAC 1 cut(s) 78
HpyCH4V TGCA 4 cut(s) 99, 145, 223, 339
Hsp92II CATG 1 cut(s) 302
LmnI GCTCC 1 cut(s) 445
LpnPI CCDG 6 cut(s) 133, 229, 335, 384, 405, 456
LweI GCATC 3 cut(s) 94, 232, 348
MaeI CTAG 2 cut(s) 15, 381
MaeIII GTNAC 1 cut(s) 103
MfeI CAATTG 1 cut(s) 192
MluCI AATT 2 cut(s) 62, 192
MnlI CCTC 2 cut(s) 306, 439
Mph1103I ATGCAT 1 cut(s) 341
MseI TTAA 4 cut(s) 164, 251, 308, 357
MslI CAYNNNNRTG 1 cut(s) 51
MspI CCGG 1 cut(s) 120
MunI CAATTG 1 cut(s) 192
NlaIII CATG 1 cut(s) 302
NlaIV GGNNCC 1 cut(s) 441
NsiI ATGCAT 1 cut(s) 341
PagI TCATGA 1 cut(s) 298
PkrI GCNGC 1 cut(s) 259
PspN4I GGNNCC 1 cut(s) 441
PstNI CAGNNNCTG 1 cut(s) 419
RsaI GTAC 3 cut(s) 60, 79, 454
RsaNI GTAC 3 cut(s) 59, 78, 453
RseI CAYNNNNRTG 1 cut(s) 51
SaqAI TTAA 4 cut(s) 164, 251, 308, 357
SatI GCNGC 1 cut(s) 258
SetI ASST 8 cut(s) 171, 189, 218, 327, 354, 363, 434, 450
SfaNI GCATC 3 cut(s) 94, 232, 348
SfcI CTRYAG 1 cut(s) 7
SmiMI CAYNNNNRTG 1 cut(s) 51
SmlI CTYRAG 1 cut(s) 182
SmoI CTYRAG 1 cut(s) 182
Sse9I AATT 2 cut(s) 62, 192
SsiI CCGC 1 cut(s) 258
SspMI CTAG 2 cut(s) 15, 381
StyI CCWWGG 1 cut(s) 14
TaqI TCGA 1 cut(s) 43
TasI AATT 2 cut(s) 62, 192
TatI WGTACW 2 cut(s) 58, 452
TauI GCSGC 1 cut(s) 260
Tru1I TTAA 4 cut(s) 164, 251, 308, 357
Tru9I TTAA 4 cut(s) 164, 251, 308, 357
TspDTI ATGAA 3 cut(s) 55, 291, 297
XcmI CCANNNNNNNNNTGG 1 cut(s) 268
XmaJI CCTAGG 1 cut(s) 14
XspI CTAG 2 cut(s) 15, 381
Zsp2I ATGCAT 1 cut(s) 341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.