pycom1094g00090

Monothiol glutaredoxin-S15

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
tig00001094
N/A
Physical Location & Seq
Reverse (-)
204380 .. 206461
2082 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 486 bp
ATGCTAACAATTAACGAAGAGTTCTGTTTTAGTAGAATAGTCATAACAAATTTCACCCCGGACCGAACAACCAACCAACCCTTCCATCTTTTGTACATCGACGGTGCAGAAAGTTACACTCACAGCTCGAAAGAAAACGCACCTCCTGCTTCTCCTCAGGCTCCTTCCACGGTGGTTCCACCTCTCTCCTCCTCTTTCTACCAGGGTTCACAGCATGGTGAGGTCTCTTTCGAATTTGGTCTTCAAGTGGCTTTCGTTTCCCGGCTCGGCTTCTCGACTGCCACAATTGCACCTGCATCCGTTTATCCCAGTGGCATGAGATACAATACCAGTGTGCCGAATGAGCACGACACGCATGATGATTTTAAACCGACTAATAAACTTGAGAGTTTTGACCTTAGTTCGAAGGACCTTGTTGAACAGGACAACCCTGTAATGCTTTATATGAAAGGAGTGCCTGAACTTCCTCAATGTGGATTCAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046872
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glutaredoxin

Protein Analysis

162

Amino Acids

17.8

Weight (kDa)

4.8

Isoelectric Point (pI)

45.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 301
Acc36I ACCTGC 1 cut(s) 301
AcsI RAATTY 2 cut(s) 49, 233
AfaI GTAC 1 cut(s) 95
AfiI CCNNNNNNNGG 1 cut(s) 473
AgsI TTSAA 2 cut(s) 245, 419
AjnI CCWGG 1 cut(s) 201
AjuI GAANNNNNNNTTGG 2 cut(s) 65, 97
AluBI AGCT 2 cut(s) 126, 483
AluI AGCT 2 cut(s) 126, 483
Alw21I GWGCWC 1 cut(s) 348
Alw26I GTCTC 1 cut(s) 229
ApoI RAATTY 2 cut(s) 49, 233
AspS9I GGNCC 2 cut(s) 61, 409
AsuC2I CCSGG 2 cut(s) 59, 262
AsuHPI GGTGA 2 cut(s) 46, 230
AsuII TTCGAA 2 cut(s) 231, 404
AvaII GGWCC 2 cut(s) 61, 409
AxyI CCTNAGG 1 cut(s) 156
BbsI GAAGAC 1 cut(s) 233
Bbv12I GWGCWC 1 cut(s) 348
BccI CCATC 1 cut(s) 93
BciT130I CCWGG 1 cut(s) 203
BcnI CCSGG 2 cut(s) 59, 262
BcoDI GTCTC 1 cut(s) 229
BfuAI ACCTGC 1 cut(s) 301
Bme1390I CCNGG 3 cut(s) 59, 203, 262
Bme18I GGWCC 2 cut(s) 61, 409
BmgT120I GGNCC 2 cut(s) 61, 409
BmiI GGNNCC 2 cut(s) 162, 177
BmrFI CCNGG 3 cut(s) 59, 203, 262
BmrI ACTGGG 1 cut(s) 303
BmsI GCATC 1 cut(s) 305
BmuI ACTGGG 1 cut(s) 303
BpiI GAAGAC 1 cut(s) 233
Bpu14I TTCGAA 2 cut(s) 231, 404
BpuEI CTTGAG 1 cut(s) 404
BpuMI CCSGG 2 cut(s) 59, 262
BsaI GGTCTC 1 cut(s) 229
BsaJI CCNNGG 3 cut(s) 57, 168, 202
Bsc4I CCNNNNNNNGG 1 cut(s) 473
Bse1I ACTGG 2 cut(s) 309, 330
Bse21I CCTNAGG 1 cut(s) 156
BseBI CCWGG 1 cut(s) 203
BseDI CCNNGG 3 cut(s) 57, 168, 202
BseGI GGATG 1 cut(s) 296
BseLI CCNNNNNNNGG 1 cut(s) 473
BseMII CTCAG 1 cut(s) 170
BseNI ACTGG 2 cut(s) 309, 330
BseRI GAGGAG 3 cut(s) 144, 178, 181
BsgI GTGCAG 1 cut(s) 126
BsiHKAI GWGCWC 1 cut(s) 348
BsiSI CCGG 2 cut(s) 59, 262
BslI CCNNNNNNNGG 1 cut(s) 473
BsmAI GTCTC 1 cut(s) 229
Bso31I GGTCTC 1 cut(s) 229
Bsp119I TTCGAA 2 cut(s) 231, 404
Bsp1286I GDGCHC 1 cut(s) 348
Bsp1407I TGTACA 1 cut(s) 93
BspCNI CTCAG 1 cut(s) 169
BspLI GGNNCC 2 cut(s) 162, 177
BspMI ACCTGC 1 cut(s) 301
BspT104I TTCGAA 2 cut(s) 231, 404
BspTNI GGTCTC 1 cut(s) 229
BsrGI TGTACA 1 cut(s) 93
BsrI ACTGG 2 cut(s) 309, 330
BssECI CCNNGG 3 cut(s) 57, 168, 202
Bst2UI CCWGG 1 cut(s) 203
Bst4CI ACNGT 2 cut(s) 104, 172
Bst6I CTCTTC 1 cut(s) 12
BstAPI GCANNNNNTGC 1 cut(s) 146
BstAUI TGTACA 1 cut(s) 93
BstBI TTCGAA 2 cut(s) 231, 404
BstDEI CTNAG 2 cut(s) 156, 398
BstDSI CCRYGG 1 cut(s) 168
BstF5I GGATG 1 cut(s) 296
BstMAI GTCTC 1 cut(s) 229
BstMWI GCNNNNNNNGC 4 cut(s) 146, 287, 343, 352
BstNI CCWGG 1 cut(s) 203
BstSCI CCNGG 3 cut(s) 57, 201, 260
BstV2I GAAGAC 1 cut(s) 233
Bsu36I CCTNAGG 1 cut(s) 156
BtgI CCRYGG 1 cut(s) 168
BtsCI GGATG 1 cut(s) 296
BtsIMutI CAGTG 2 cut(s) 316, 337
BveI ACCTGC 1 cut(s) 301
Cfr13I GGNCC 2 cut(s) 61, 409
CpoI CGGWCCG 1 cut(s) 61
Csp6I GTAC 1 cut(s) 94
CspI CGGWCCG 1 cut(s) 61
CviAII CATG 3 cut(s) 215, 316, 356
CviJI RGCY 6 cut(s) 126, 161, 251, 265, 270, 483
CviKI_1 RGCY 6 cut(s) 126, 161, 251, 265, 270, 483
CviQI GTAC 1 cut(s) 94
DdeI CTNAG 2 cut(s) 156, 398
DraI TTTAAA 1 cut(s) 367
Eam1104I CTCTTC 1 cut(s) 12
EarI CTCTTC 1 cut(s) 12
Eco31I GGTCTC 1 cut(s) 229
Eco47I GGWCC 2 cut(s) 61, 409
Eco81I CCTNAGG 1 cut(s) 156
EcoO109I RGGNCCY 1 cut(s) 409
EcoRII CCWGG 1 cut(s) 201
FaeI CATG 3 cut(s) 218, 319, 359
FaiI YATR 6 cut(s) 44, 216, 317, 357, 444, 446
FatI CATG 3 cut(s) 214, 315, 355
FokI GGATG 1 cut(s) 283
HapII CCGG 2 cut(s) 59, 262
Hin1II CATG 3 cut(s) 218, 319, 359
HinfI GANTC 1 cut(s) 477
HpaII CCGG 2 cut(s) 59, 262
HphI GGTGA 2 cut(s) 46, 230
Hpy166II GTNNAC 1 cut(s) 209
Hpy188III TCNNGA 1 cut(s) 274
Hpy8I GTNNAC 1 cut(s) 209
Hpy99I CGWCG 1 cut(s) 104
HpyAV CCTTC 3 cut(s) 91, 174, 400
HpyCH4III ACNGT 2 cut(s) 104, 172
HpyCH4V TGCA 3 cut(s) 107, 290, 296
HpyF10VI GCNNNNNNNGC 4 cut(s) 146, 287, 343, 352
HpyF3I CTNAG 2 cut(s) 156, 398
Hsp92II CATG 3 cut(s) 218, 319, 359
LmnI GCTCC 1 cut(s) 166
LweI GCATC 1 cut(s) 305
MaeIII GTNAC 1 cut(s) 113
MboII GAAGA 2 cut(s) 29, 233
MfeI CAATTG 1 cut(s) 285
MhlI GDGCHC 1 cut(s) 348
MluCI AATT 4 cut(s) 9, 49, 233, 285
MnlI CCTC 7 cut(s) 153, 165, 192, 199, 202, 214, 477
MseI TTAA 2 cut(s) 12, 366
MspA1I CMGCKG 1 cut(s) 483
MspI CCGG 2 cut(s) 59, 262
MspR9I CCNGG 3 cut(s) 59, 203, 262
MunI CAATTG 1 cut(s) 285
MvaI CCWGG 1 cut(s) 203
MwoI GCNNNNNNNGC 4 cut(s) 146, 287, 343, 352
NciI CCSGG 2 cut(s) 59, 262
NlaIII CATG 3 cut(s) 218, 319, 359
NlaIV GGNNCC 2 cut(s) 162, 177
NmeAIII GCCGAG 1 cut(s) 246
NspV TTCGAA 2 cut(s) 231, 404
PaqCI CACCTGC 1 cut(s) 301
PfeI GAWTC 1 cut(s) 477
PpuMI RGGWCCY 1 cut(s) 409
Psp5II RGGWCCY 1 cut(s) 409
Psp6I CCWGG 1 cut(s) 201
PspGI CCWGG 1 cut(s) 201
PspN4I GGNNCC 2 cut(s) 162, 177
PspPI GGNCC 2 cut(s) 61, 409
PspPPI RGGWCCY 1 cut(s) 409
PvuII CAGCTG 1 cut(s) 483
RsaI GTAC 1 cut(s) 95
RsaNI GTAC 1 cut(s) 94
Rsr2I CGGWCCG 1 cut(s) 61
RsrII CGGWCCG 1 cut(s) 61
SaqAI TTAA 2 cut(s) 12, 366
Sau96I GGNCC 2 cut(s) 61, 409
ScrFI CCNGG 3 cut(s) 59, 203, 262
SduI GDGCHC 1 cut(s) 348
SetI ASST 8 cut(s) 128, 145, 184, 225, 295, 399, 414, 485
SfaNI GCATC 1 cut(s) 305
SfuI TTCGAA 2 cut(s) 231, 404
SinI GGWCC 2 cut(s) 61, 409
SmlI CTYRAG 1 cut(s) 383
SmoI CTYRAG 1 cut(s) 383
Sse9I AATT 4 cut(s) 9, 49, 233, 285
StyD4I CCNGG 3 cut(s) 57, 201, 260
TaaI ACNGT 2 cut(s) 104, 172
TaqI TCGA 5 cut(s) 99, 128, 231, 275, 404
TaqII GACCGA 1 cut(s) 78
TasI AATT 4 cut(s) 9, 49, 233, 285
TatI WGTACW 1 cut(s) 93
TfiI GAWTC 1 cut(s) 477
Tru1I TTAA 2 cut(s) 12, 366
Tru9I TTAA 2 cut(s) 12, 366
TscAI CASTG 2 cut(s) 316, 337
TspDTI ATGAA 1 cut(s) 461
TspGWI ACGGA 1 cut(s) 289
TspRI CASTG 2 cut(s) 316, 337
VpaK11BI GGWCC 2 cut(s) 61, 409
XapI RAATTY 2 cut(s) 49, 233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.