MADS-box transcription factor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SRF-TF | PF00319 | 10 - 57 | 1.3e-24 | SRF-type transcription factor (DNA-binding and dimerisation domain) |
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No orthologs found for this gene in the current database.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 1 cut(s) | 208 |
| AluBI | AGCT | 3 cut(s) | 103, 160, 280 |
| AluI | AGCT | 3 cut(s) | 103, 160, 280 |
| AsuII | TTCGAA | 2 cut(s) | 25, 65 |
| AsuNHI | GCTAGC | 1 cut(s) | 173 |
| BbvCI | CCTCAGC | 1 cut(s) | 123 |
| BfaI | CTAG | 3 cut(s) | 147, 174, 180 |
| BmsI | GCATC | 2 cut(s) | 109, 235 |
| BmtI | GCTAGC | 1 cut(s) | 177 |
| Bpu10I | CCTNAGC | 2 cut(s) | 96, 123 |
| Bpu14I | TTCGAA | 2 cut(s) | 25, 65 |
| Bsa29I | ATCGAT | 1 cut(s) | 198 |
| Bse118I | RCCGGY | 1 cut(s) | 152 |
| BseCI | ATCGAT | 1 cut(s) | 198 |
| BseMII | CTCAG | 1 cut(s) | 114 |
| Bsh1285I | CGRYCG | 1 cut(s) | 202 |
| BshVI | ATCGAT | 1 cut(s) | 198 |
| BsiEI | CGRYCG | 1 cut(s) | 202 |
| BsiSI | CCGG | 1 cut(s) | 153 |
| Bsp119I | TTCGAA | 2 cut(s) | 25, 65 |
| Bsp143I | GATC | 1 cut(s) | 199 |
| BspCNI | CTCAG | 1 cut(s) | 115 |
| BspDI | ATCGAT | 1 cut(s) | 198 |
| BspOI | GCTAGC | 1 cut(s) | 177 |
| BspT104I | TTCGAA | 2 cut(s) | 25, 65 |
| BsrFI | RCCGGY | 1 cut(s) | 152 |
| BssAI | RCCGGY | 1 cut(s) | 152 |
| BssMI | GATC | 1 cut(s) | 199 |
| Bst6I | CTCTTC | 1 cut(s) | 62 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 232 |
| BstBI | TTCGAA | 2 cut(s) | 25, 65 |
| BstC8I | GCNNGC | 3 cut(s) | 50, 158, 175 |
| BstDEI | CTNAG | 2 cut(s) | 96, 123 |
| BstEII | GGTNACC | 1 cut(s) | 259 |
| BstKTI | GATC | 1 cut(s) | 202 |
| BstMBI | GATC | 1 cut(s) | 199 |
| BstMCI | CGRYCG | 1 cut(s) | 202 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 232 |
| BstPI | GGTNACC | 1 cut(s) | 259 |
| Bsu15I | ATCGAT | 1 cut(s) | 198 |
| BsuTUI | ATCGAT | 1 cut(s) | 198 |
| Cac8I | GCNNGC | 3 cut(s) | 50, 158, 175 |
| Cfr10I | RCCGGY | 1 cut(s) | 152 |
| ClaI | ATCGAT | 1 cut(s) | 198 |
| CviAII | CATG | 1 cut(s) | 184 |
| CviJI | RGCY | 4 cut(s) | 95, 103, 160, 280 |
| CviKI_1 | RGCY | 4 cut(s) | 95, 103, 160, 280 |
| DdeI | CTNAG | 2 cut(s) | 96, 123 |
| DpnI | GATC | 1 cut(s) | 201 |
| DpnII | GATC | 1 cut(s) | 199 |
| Eam1104I | CTCTTC | 1 cut(s) | 62 |
| EarI | CTCTTC | 1 cut(s) | 62 |
| Eco91I | GGTNACC | 1 cut(s) | 259 |
| EcoO65I | GGTNACC | 1 cut(s) | 259 |
| FaeI | CATG | 1 cut(s) | 187 |
| FaiI | YATR | 2 cut(s) | 171, 185 |
| FatI | CATG | 1 cut(s) | 183 |
| FspBI | CTAG | 3 cut(s) | 147, 174, 180 |
| HapII | CCGG | 1 cut(s) | 153 |
| Hin1II | CATG | 1 cut(s) | 187 |
| HindIII | AAGCTT | 1 cut(s) | 158 |
| HinfI | GANTC | 2 cut(s) | 22, 238 |
| HpaII | CCGG | 1 cut(s) | 153 |
| Hpy188I | TCNGA | 1 cut(s) | 250 |
| HpyAV | CCTTC | 1 cut(s) | 85 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 232 |
| HpyF3I | CTNAG | 2 cut(s) | 96, 123 |
| Hsp92II | CATG | 1 cut(s) | 187 |
| Kzo9I | GATC | 1 cut(s) | 199 |
| LmnI | GCTCC | 3 cut(s) | 100, 223, 285 |
| LpnPI | CCDG | 3 cut(s) | 34, 166, 255 |
| LweI | GCATC | 2 cut(s) | 109, 235 |
| MaeI | CTAG | 3 cut(s) | 147, 174, 180 |
| MaeIII | GTNAC | 2 cut(s) | 55, 259 |
| MalI | GATC | 1 cut(s) | 201 |
| MboI | GATC | 1 cut(s) | 199 |
| MboII | GAAGA | 3 cut(s) | 39, 79, 84 |
| MluCI | AATT | 2 cut(s) | 30, 37 |
| MmeI | TCCRAC | 1 cut(s) | 109 |
| MnlI | CCTC | 1 cut(s) | 118 |
| MseI | TTAA | 2 cut(s) | 41, 87 |
| MslI | CAYNNNNRTG | 1 cut(s) | 182 |
| MspI | CCGG | 1 cut(s) | 153 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 232 |
| NdeII | GATC | 1 cut(s) | 199 |
| NheI | GCTAGC | 1 cut(s) | 173 |
| NlaIII | CATG | 1 cut(s) | 187 |
| NmuCI | GTSAC | 1 cut(s) | 55 |
| NspV | TTCGAA | 2 cut(s) | 25, 65 |
| PfeI | GAWTC | 2 cut(s) | 22, 238 |
| Ple19I | CGATCG | 1 cut(s) | 202 |
| PspEI | GGTNACC | 1 cut(s) | 259 |
| PvuI | CGATCG | 1 cut(s) | 202 |
| RseI | CAYNNNNRTG | 1 cut(s) | 182 |
| SaqAI | TTAA | 2 cut(s) | 41, 87 |
| Sau3AI | GATC | 1 cut(s) | 199 |
| SetI | ASST | 6 cut(s) | 62, 105, 129, 162, 261, 282 |
| SfaNI | GCATC | 2 cut(s) | 109, 235 |
| SfuI | TTCGAA | 2 cut(s) | 25, 65 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 182 |
| Sse9I | AATT | 2 cut(s) | 30, 37 |
| SspMI | CTAG | 3 cut(s) | 147, 174, 180 |
| TaqI | TCGA | 3 cut(s) | 25, 65, 198 |
| TasI | AATT | 2 cut(s) | 30, 37 |
| TfiI | GAWTC | 2 cut(s) | 22, 238 |
| Tru1I | TTAA | 2 cut(s) | 41, 87 |
| Tru9I | TTAA | 2 cut(s) | 41, 87 |
| TseFI | GTSAC | 1 cut(s) | 55 |
| Tsp45I | GTSAC | 1 cut(s) | 55 |
| TspDTI | ATGAA | 1 cut(s) | 200 |
| XspI | CTAG | 3 cut(s) | 147, 174, 180 |