Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

10881394 .. 10882466

Gene Structure 1073 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 543 bp

ATGCTGGAAAGAAAATTAGATTACCAGAGTCGTATCTCCATGGCCACGGATGCTTCCACGGCGACATCAAGCTCGGAAACATCTTGGTTGACTCTGACGGGTCCGTTAAGCTTGCACATTTCGGGGTCTCTGCTTCTTTCTACGACGCCGATTTTTTCAACTGAGGCAAACGATACTTCTACAAGGCCGTACTGGGTGGCGCCCGGCGGAGGGAATCAAATTCTGAAGATCAAGAACAGGTTTCGGCTTGCGGATTACGAAAACATCATCAAAGATTTCCGAAACCAGAAATACTCTGCGGCTTTCAAGGACTTGGTGGCTTCTTGCCTTGATTGGGATCCGGAGAAGAGGCCGGCGGCAGAGGTGCTGCTAAAGCACCCGTTTTTCCACGACTGCGGAGGCAAGGATTATCTGGTGGGAACTGTGCTTCCGCTTTTGGAGAGCGTCGATGAGAGATTCAAGAAAAGAAACAGGGAAGAAAGAGCTCTTGTATTACGAATAAGAAAATACACGGAAACGAAAGAAAGTAATGAAGAAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010119 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902456

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

181

Amino Acids

20.53

Weight (kDa)

8.49

Isoelectric Point (pI)

37.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	74 - 129	6.9e-06	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	199
AccIII	TCCGGA	1 cut(s)	340
AciI	CCGC	6 cut(s)	207, 251, 299, 356, 396, 431
AclWI	GGATC	2 cut(s)	332, 345
AcoI	YGGCCR	1 cut(s)	42
AcsI	RAATTY	1 cut(s)	219
AcuI	CTGAAG	1 cut(s)	245
AcyI	GRCGYC	2 cut(s)	146, 200
AfaI	GTAC	1 cut(s)	191
AfiI	CCNNNNNNNGG	3 cut(s)	209, 210, 334
AgsI	TTSAA	3 cut(s)	159, 307, 460
AloI	GAACNNNNNNTCC	2 cut(s)	412, 444
AluBI	AGCT	3 cut(s)	72, 111, 485
AluI	AGCT	3 cut(s)	72, 111, 485
Alw21I	GWGCWC	1 cut(s)	487
Alw26I	GTCTC	1 cut(s)	132
AlwI	GGATC	2 cut(s)	332, 345
Aor13HI	TCCGGA	1 cut(s)	340
AoxI	GGCC	3 cut(s)	42, 185, 350
ApeKI	GCWGC	1 cut(s)	367
ApoI	RAATTY	1 cut(s)	219
AspLEI	GCGC	1 cut(s)	202
AspS9I	GGNCC	1 cut(s)	101
AsuC2I	CCSGG	1 cut(s)	204
AvaII	GGWCC	1 cut(s)	101
BalI	TGGCCA	1 cut(s)	44
BamHI	GGATCC	1 cut(s)	337
BanI	GGYRCC	1 cut(s)	199
BanII	GRGCYC	1 cut(s)	487
Bbv12I	GWGCWC	1 cut(s)	487
BbvI	GCAGC	1 cut(s)	354
BceAI	ACGGC	2 cut(s)	75, 172
BcnI	CCSGG	1 cut(s)	204
BcoDI	GTCTC	1 cut(s)	132
BfoI	RGCGCY	1 cut(s)	203
BisI	GCNGC	3 cut(s)	300, 357, 368
BlsI	GCNGC	3 cut(s)	301, 358, 369
Bme1390I	CCNGG	1 cut(s)	204
Bme18I	GGWCC	1 cut(s)	101
BmgT120I	GGNCC	1 cut(s)	101
BmiI	GGNNCC	3 cut(s)	102, 201, 339
BmrFI	CCNGG	1 cut(s)	204
BmrI	ACTGGG	1 cut(s)	202
BmsI	GCATC	1 cut(s)	40
BmuI	ACTGGG	1 cut(s)	202
BpuMI	CCSGG	1 cut(s)	204
BsaBI	GATNNNNATC	1 cut(s)	336
BsaHI	GRCGYC	2 cut(s)	146, 200
BsaI	GGTCTC	1 cut(s)	132
BsaJI	CCNNGG	3 cut(s)	39, 45, 57
BsaWI	WCCGGW	1 cut(s)	340
Bsc4I	CCNNNNNNNGG	3 cut(s)	209, 210, 334
Bse118I	RCCGGY	1 cut(s)	352
Bse1I	ACTGG	1 cut(s)	197
Bse8I	GATNNNNATC	1 cut(s)	336
BseAI	TCCGGA	1 cut(s)	340
BseDI	CCNNGG	3 cut(s)	39, 45, 57
BseGI	GGATG	1 cut(s)	55
BseJI	GATNNNNATC	1 cut(s)	336
BseLI	CCNNNNNNNGG	3 cut(s)	209, 210, 334
BseMII	CTCAG	1 cut(s)	153
BseNI	ACTGG	1 cut(s)	197
BseXI	GCAGC	1 cut(s)	354
BshFI	GGCC	3 cut(s)	44, 187, 352
BshNI	GGYRCC	1 cut(s)	199
BsiHKAI	GWGCWC	1 cut(s)	487
BsiSI	CCGG	3 cut(s)	204, 341, 353
BslI	CCNNNNNNNGG	3 cut(s)	209, 210, 334
BsmAI	GTCTC	1 cut(s)	132
BsnI	GGCC	3 cut(s)	44, 187, 352
Bso31I	GGTCTC	1 cut(s)	132
Bsp1286I	GDGCHC	1 cut(s)	487
Bsp13I	TCCGGA	1 cut(s)	340
Bsp143I	GATC	2 cut(s)	228, 337
Bsp19I	CCATGG	1 cut(s)	39
BspACI	CCGC	6 cut(s)	207, 251, 299, 356, 396, 431
BspANI	GGCC	3 cut(s)	44, 187, 352
BspCNI	CTCAG	1 cut(s)	154
BspEI	TCCGGA	1 cut(s)	340
BspLI	GGNNCC	3 cut(s)	102, 201, 339
BspPI	GGATC	2 cut(s)	332, 345
BspT107I	GGYRCC	1 cut(s)	199
BspTNI	GGTCTC	1 cut(s)	132
BsrFI	RCCGGY	1 cut(s)	352
BsrI	ACTGG	1 cut(s)	197
BssAI	RCCGGY	1 cut(s)	352
BssECI	CCNNGG	3 cut(s)	39, 45, 57
BssMI	GATC	2 cut(s)	228, 337
BssNI	GRCGYC	2 cut(s)	146, 200
BssT1I	CCWWGG	1 cut(s)	39
Bst4CI	ACNGT	1 cut(s)	424
Bst6I	CTCTTC	1 cut(s)	341
BstACI	GRCGYC	2 cut(s)	146, 200
BstC8I	GCNNGC	3 cut(s)	113, 249, 354
BstDEI	CTNAG	1 cut(s)	162
BstDSI	CCRYGG	3 cut(s)	39, 45, 57
BstF5I	GGATG	1 cut(s)	55
BstH2I	RGCGCY	1 cut(s)	203
BstHHI	GCGC	1 cut(s)	202
BstKTI	GATC	2 cut(s)	231, 340
BstMAI	GTCTC	1 cut(s)	132
BstMBI	GATC	2 cut(s)	228, 337
BstMWI	GCNNNNNNNGC	3 cut(s)	50, 59, 373
BstSCI	CCNGG	1 cut(s)	202
BstV1I	GCAGC	1 cut(s)	354
BstX2I	RGATCY	1 cut(s)	337
BstYI	RGATCY	1 cut(s)	337
BsuRI	GGCC	3 cut(s)	44, 187, 352
BtgI	CCRYGG	3 cut(s)	39, 45, 57
BtsCI	GGATG	1 cut(s)	55
Cac8I	GCNNGC	3 cut(s)	113, 249, 354
CfoI	GCGC	1 cut(s)	202
Cfr10I	RCCGGY	1 cut(s)	352
Cfr13I	GGNCC	1 cut(s)	101
CseI	GACGC	2 cut(s)	154, 433
Csp6I	GTAC	1 cut(s)	190
CviAII	CATG	1 cut(s)	40
CviJI	RGCY	9 cut(s)	44, 72, 111, 187, 247, 302, 320, 352, 485
CviKI_1	RGCY	9 cut(s)	44, 72, 111, 187, 247, 302, 320, 352, 485
CviQI	GTAC	1 cut(s)	190
DdeI	CTNAG	1 cut(s)	162
DinI	GGCGCC	1 cut(s)	201
DpnI	GATC	2 cut(s)	230, 339
DpnII	GATC	2 cut(s)	228, 337
EaeI	YGGCCR	1 cut(s)	42
Eam1104I	CTCTTC	1 cut(s)	341
EarI	CTCTTC	1 cut(s)	341
EciI	GGCGGA	1 cut(s)	222
Ecl136II	GAGCTC	1 cut(s)	485
Eco130I	CCWWGG	1 cut(s)	39
Eco24I	GRGCYC	1 cut(s)	487
Eco31I	GGTCTC	1 cut(s)	132
Eco47I	GGWCC	1 cut(s)	101
Eco53kI	GAGCTC	1 cut(s)	485
Eco57I	CTGAAG	1 cut(s)	245
EcoICRI	GAGCTC	1 cut(s)	485
EcoT14I	CCWWGG	1 cut(s)	39
EcoT38I	GRGCYC	1 cut(s)	487
EgeI	GGCGCC	1 cut(s)	201
EheI	GGCGCC	1 cut(s)	201
ErhI	CCWWGG	1 cut(s)	39
FaeI	CATG	1 cut(s)	43
FaiI	YATR	1 cut(s)	41
FatI	CATG	1 cut(s)	39
Fnu4HI	GCNGC	3 cut(s)	300, 357, 368
FokI	GGATG	1 cut(s)	62
FriOI	GRGCYC	1 cut(s)	487
Fsp4HI	GCNGC	3 cut(s)	300, 357, 368
GlaI	GCGC	1 cut(s)	201
GluI	GCNGC	3 cut(s)	300, 357, 368
HaeII	RGCGCY	1 cut(s)	203
HaeIII	GGCC	3 cut(s)	44, 187, 352
HapII	CCGG	3 cut(s)	204, 341, 353
HgaI	GACGC	2 cut(s)	154, 433
HhaI	GCGC	1 cut(s)	202
Hin1I	GRCGYC	2 cut(s)	146, 200
Hin1II	CATG	1 cut(s)	43
Hin6I	GCGC	1 cut(s)	200
HinP1I	GCGC	1 cut(s)	200
HincII	GTYRAC	1 cut(s)	90
HindII	GTYRAC	1 cut(s)	90
HindIII	AAGCTT	1 cut(s)	109
HinfI	GANTC	4 cut(s)	28, 91, 214, 456
HpaII	CCGG	3 cut(s)	204, 341, 353
Hpy166II	GTNNAC	1 cut(s)	90
Hpy188I	TCNGA	4 cut(s)	76, 96, 225, 281
Hpy188III	TCNNGA	3 cut(s)	232, 341, 460
Hpy8I	GTNNAC	1 cut(s)	90
Hpy99I	CGWCG	2 cut(s)	148, 449
HpyCH4III	ACNGT	1 cut(s)	424
HpyCH4V	TGCA	1 cut(s)	115
HpyF10VI	GCNNNNNNNGC	3 cut(s)	50, 59, 373
HpyF3I	CTNAG	1 cut(s)	162
Hsp92I	GRCGYC	2 cut(s)	146, 200
Hsp92II	CATG	1 cut(s)	43
HspAI	GCGC	1 cut(s)	200
KasI	GGCGCC	1 cut(s)	199
Kpn2I	TCCGGA	1 cut(s)	340
KroI	GCCGGC	1 cut(s)	352
KroNI	GCCGGC	1 cut(s)	354
Kzo9I	GATC	2 cut(s)	228, 337
LpnPI	CCDG	9 cut(s)	38, 178, 217, 223, 299, 354, 366, 398, 457
Lsp1109I	GCAGC	1 cut(s)	354
LweI	GCATC	1 cut(s)	40
MalI	GATC	2 cut(s)	230, 339
MboI	GATC	2 cut(s)	228, 337
MboII	GAAGA	3 cut(s)	238, 358, 488
MflI	RGATCY	1 cut(s)	337
MhlI	GDGCHC	1 cut(s)	487
MlsI	TGGCCA	1 cut(s)	44
MluCI	AATT	2 cut(s)	14, 219
MluNI	TGGCCA	1 cut(s)	44
Mly113I	GGCGCC	1 cut(s)	200
MlyI	GAGTC	2 cut(s)	37, 85
MnlI	CCTC	5 cut(s)	157, 203, 342, 355, 392
Mox20I	TGGCCA	1 cut(s)	44
MroI	TCCGGA	1 cut(s)	340
MroNI	GCCGGC	1 cut(s)	352
MscI	TGGCCA	1 cut(s)	44
MseI	TTAA	1 cut(s)	107
Msp20I	TGGCCA	1 cut(s)	44
MspI	CCGG	3 cut(s)	204, 341, 353
MspR9I	CCNGG	1 cut(s)	204
MwoI	GCNNNNNNNGC	3 cut(s)	50, 59, 373
NaeI	GCCGGC	1 cut(s)	354
NarI	GGCGCC	1 cut(s)	200
NciI	CCSGG	1 cut(s)	204
NcoI	CCATGG	1 cut(s)	39
NdeII	GATC	2 cut(s)	228, 337
NgoMIV	GCCGGC	1 cut(s)	352
NlaIII	CATG	1 cut(s)	43
NlaIV	GGNNCC	3 cut(s)	102, 201, 339
PdiI	GCCGGC	1 cut(s)	354
PfeI	GAWTC	2 cut(s)	214, 456
PkrI	GCNGC	3 cut(s)	301, 358, 369
PleI	GAGTC	2 cut(s)	36, 85
PluTI	GGCGCC	1 cut(s)	203
PpsI	GAGTC	2 cut(s)	36, 85
Psp124BI	GAGCTC	1 cut(s)	487
PspN4I	GGNNCC	3 cut(s)	102, 201, 339
PspPI	GGNCC	1 cut(s)	101
PsuI	RGATCY	1 cut(s)	337
RsaI	GTAC	1 cut(s)	191
RsaNI	GTAC	1 cut(s)	190
SacI	GAGCTC	1 cut(s)	487
SaqAI	TTAA	1 cut(s)	107
SatI	GCNGC	3 cut(s)	300, 357, 368
Sau3AI	GATC	2 cut(s)	228, 337
Sau96I	GGNCC	1 cut(s)	101
SchI	GAGTC	2 cut(s)	37, 85
ScrFI	CCNGG	1 cut(s)	204
SduI	GDGCHC	1 cut(s)	487
SetI	ASST	5 cut(s)	74, 113, 242, 366, 487
SfaNI	GCATC	1 cut(s)	40
SfoI	GGCGCC	1 cut(s)	201
SinI	GGWCC	1 cut(s)	101
Sse9I	AATT	2 cut(s)	14, 219
SsiI	CCGC	6 cut(s)	207, 251, 299, 356, 396, 431
SspDI	GGCGCC	1 cut(s)	199
SstI	GAGCTC	1 cut(s)	487
StyD4I	CCNGG	1 cut(s)	202
StyI	CCWWGG	1 cut(s)	39
TaaI	ACNGT	1 cut(s)	424
TaqI	TCGA	1 cut(s)	447
TasI	AATT	2 cut(s)	14, 219
TauI	GCSGC	2 cut(s)	302, 359
TfiI	GAWTC	2 cut(s)	214, 456
Tru1I	TTAA	1 cut(s)	107
Tru9I	TTAA	1 cut(s)	107
TseI	GCWGC	1 cut(s)	367
TspGWI	ACGGA	3 cut(s)	62, 93, 527
VpaK11BI	GGWCC	1 cut(s)	101
XapI	RAATTY	1 cut(s)	219

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.