pycom10g12840

Protein of unknown function (DUF707)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
N/A
Physical Location & Seq
Reverse (-)
16318903 .. 16320745
1843 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 963 bp
ATGGATTTGATATCTCATTGTTATTCGGTTTCGCAGTTCATGTCAAGTGATTTCGTTTTGATGCTTTTCCATTATGACGGTCATGTAAACGAGTGGAGAGATTTGGAATGGAGTGGTAAGGCCATTCATGTGTCTGCTATGAATCAAACTAAGTGGTGGTATGCCAAGCGTTTCTTGCATCCAGATATTGTTTCTGAGTACGAATTCATCTTCCTCTGGGACGAGGACCTTGGAATCGAAAATTTCAATGCTGGAAGGTGCTTGCCCAATTCGTACATTATTCATGCATTAATTGATGTGAACCATTGCATCCAAATATTGTTTCTGAGTATGATGAATCCATCTTGGTTTCTTTCATATGCAGATACTTATCGATTATTAGAAAAGAGGGGCTTGAGATATCACAGCCAGCACTGGATCCTGACAACTCCGAGGTGCATCATCTTCTTACGGCGAGAGACAACAGAACAGAAGTACACAGTTCATGCTTGGGGCTTGGATTTCCAGCTTGGTTATTGTGCACAGGCAATTTTTCCATCTTGTAAATTACATCTTTTCTTCACCCATTCTATTCTGTACATTTCTCATGTCCGAATCAATCCTTTACAGGGTGATCGAACTAAAAATATCGGAATTGTTGATTCTGAGTACATTATTCATTATGGTATTCCTTCATTGGGGGGTTCGGCAGCAAACAAGACACATGCTGATGCAAATGATCAACCTGCTCAAAATATAAACTTGCCTAGTTCAGAACAGCCGGTATCTGACCCTAGAACTGAGCCCAAAGCTTGTACCGCGAACTTAGGGATTCTTCAAATTCATTGTTCATGCATCTATTATGTTCAGGTGAGGAAGCTATCCTTAGCTGAATTGGAAATTTTCAAGAACAGATGGAAAAGGGCAATCAGAGAAGATAATTGCTGGATTGATCCATTCCAAAAGAACATCACAGCAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF707

Protein Analysis

321

Amino Acids

37.35

Weight (kDa)

6.75

Isoelectric Point (pI)

50.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF707 PF05212 10 - 87 1.1e-42 Protein of unknown function (DUF707)
DUF707 PF05212 203 - 242 7e-07 Protein of unknown function (DUF707)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 733
AccII CGCG 1 cut(s) 800
AciI CCGC 1 cut(s) 798
AclWI GGATC 3 cut(s) 412, 425, 926
AcsI RAATTY 4 cut(s) 203, 241, 819, 879
AfaI GTAC 6 cut(s) 200, 275, 476, 578, 650, 796
AfiI CCNNNNNNNGG 2 cut(s) 608, 677
AgsI TTSAA 3 cut(s) 247, 818, 886
AjuI GAANNNNNNNTTGG 2 cut(s) 306, 338
AluBI AGCT 4 cut(s) 508, 791, 859, 869
AluI AGCT 4 cut(s) 508, 791, 859, 869
Alw21I GWGCWC 1 cut(s) 523
Alw26I GTCTC 1 cut(s) 452
Alw44I GTGCAC 1 cut(s) 519
AlwI GGATC 3 cut(s) 412, 425, 926
AoxI GGCC 1 cut(s) 120
ApaLI GTGCAC 1 cut(s) 519
ApeKI GCWGC 1 cut(s) 689
ApoI RAATTY 4 cut(s) 203, 241, 819, 879
AseI ATTAAT 1 cut(s) 290
AspS9I GGNCC 1 cut(s) 226
AsuHPI GGTGA 3 cut(s) 553, 623, 862
AvaII GGWCC 1 cut(s) 226
BaeGI GKGCMC 1 cut(s) 523
BamHI GGATCC 1 cut(s) 417
BanII GRGCYC 1 cut(s) 786
Bbv12I GWGCWC 1 cut(s) 523
BbvI GCAGC 1 cut(s) 701
BccI CCATC 3 cut(s) 349, 544, 888
BceAI ACGGC 1 cut(s) 467
BclI TGATCA 1 cut(s) 718
BcoDI GTCTC 1 cut(s) 452
BfaI CTAG 2 cut(s) 747, 774
BfuAI ACCTGC 1 cut(s) 733
BisI GCNGC 1 cut(s) 690
BlsI GCNGC 1 cut(s) 691
Bme18I GGWCC 1 cut(s) 226
BmgT120I GGNCC 1 cut(s) 226
BmiI GGNNCC 1 cut(s) 419
BmsI GCATC 6 cut(s) 51, 187, 318, 447, 700, 843
Bpu10I CCTNAGC 1 cut(s) 865
BpuEI CTTGAG 1 cut(s) 415
Bsa29I ATCGAT 1 cut(s) 373
BsaBI GATNNNNATC 1 cut(s) 369
BsaJI CCNNGG 2 cut(s) 229, 431
Bsc4I CCNNNNNNNGG 2 cut(s) 608, 677
Bse118I RCCGGY 1 cut(s) 760
Bse1I ACTGG 1 cut(s) 419
Bse3DI GCAATG 1 cut(s) 304
Bse8I GATNNNNATC 1 cut(s) 369
BseCI ATCGAT 1 cut(s) 373
BseDI CCNNGG 2 cut(s) 229, 431
BseGI GGATG 2 cut(s) 178, 309
BseJI GATNNNNATC 1 cut(s) 369
BseLI CCNNNNNNNGG 2 cut(s) 608, 677
BseMI GCAATG 1 cut(s) 304
BseMII CTCAG 4 cut(s) 186, 317, 636, 771
BseNI ACTGG 1 cut(s) 419
BseSI GKGCMC 1 cut(s) 523
BseXI GCAGC 1 cut(s) 701
Bsh1236I CGCG 1 cut(s) 800
BshFI GGCC 1 cut(s) 122
BshVI ATCGAT 1 cut(s) 373
BsiHKAI GWGCWC 1 cut(s) 523
BsiSI CCGG 1 cut(s) 761
BslFI GGGAC 1 cut(s) 233
BslI CCNNNNNNNGG 2 cut(s) 608, 677
BsmAI GTCTC 1 cut(s) 452
BsmFI GGGAC 1 cut(s) 233
BsnI GGCC 1 cut(s) 122
Bsp1286I GDGCHC 2 cut(s) 523, 786
Bsp1407I TGTACA 1 cut(s) 576
Bsp143I GATC 4 cut(s) 417, 613, 718, 931
BspACI CCGC 1 cut(s) 798
BspANI GGCC 1 cut(s) 122
BspCNI CTCAG 4 cut(s) 187, 318, 637, 772
BspDI ATCGAT 1 cut(s) 373
BspFNI CGCG 1 cut(s) 800
BspLI GGNNCC 1 cut(s) 419
BspMI ACCTGC 1 cut(s) 733
BspPI GGATC 3 cut(s) 412, 425, 926
BsrDI GCAATG 1 cut(s) 304
BsrFI RCCGGY 1 cut(s) 760
BsrGI TGTACA 1 cut(s) 576
BsrI ACTGG 1 cut(s) 419
BssAI RCCGGY 1 cut(s) 760
BssECI CCNNGG 2 cut(s) 229, 431
BssMI GATC 4 cut(s) 417, 613, 718, 931
BssT1I CCWWGG 1 cut(s) 229
Bst4CI ACNGT 2 cut(s) 80, 481
BstAUI TGTACA 1 cut(s) 576
BstC8I GCNNGC 2 cut(s) 263, 410
BstDEI CTNAG 7 cut(s) 150, 195, 326, 645, 780, 805, 865
BstF5I GGATG 2 cut(s) 178, 309
BstFNI CGCG 1 cut(s) 800
BstKTI GATC 4 cut(s) 420, 616, 721, 934
BstMAI GTCTC 1 cut(s) 452
BstMBI GATC 4 cut(s) 417, 613, 718, 931
BstMWI GCNNNNNNNGC 2 cut(s) 175, 797
BstNSI RCATGY 1 cut(s) 707
BstSLI GKGCMC 1 cut(s) 523
BstUI CGCG 1 cut(s) 800
BstV1I GCAGC 1 cut(s) 701
BstX2I RGATCY 1 cut(s) 417
BstYI RGATCY 1 cut(s) 417
Bsu15I ATCGAT 1 cut(s) 373
BsuRI GGCC 1 cut(s) 122
BsuTUI ATCGAT 1 cut(s) 373
BtsCI GGATG 2 cut(s) 178, 309
BtsIMutI CAGTG 1 cut(s) 412
BveI ACCTGC 1 cut(s) 733
Cac8I GCNNGC 2 cut(s) 263, 410
Cfr10I RCCGGY 1 cut(s) 760
Cfr13I GGNCC 1 cut(s) 226
ClaI ATCGAT 1 cut(s) 373
Csp6I GTAC 6 cut(s) 199, 274, 475, 577, 649, 795
CspCI CAANNNNNGTGG 2 cut(s) 134, 169
CviAII CATG 8 cut(s) 40, 83, 128, 284, 485, 587, 704, 831
CviQI GTAC 6 cut(s) 199, 274, 475, 577, 649, 795
DdeI CTNAG 7 cut(s) 150, 195, 326, 645, 780, 805, 865
DpnI GATC 4 cut(s) 419, 615, 720, 933
DpnII GATC 4 cut(s) 417, 613, 718, 931
Eco130I CCWWGG 1 cut(s) 229
Eco24I GRGCYC 1 cut(s) 786
Eco32I GATATC 2 cut(s) 12, 401
Eco47I GGWCC 1 cut(s) 226
EcoO109I RGGNCCY 1 cut(s) 226
EcoRI GAATTC 1 cut(s) 203
EcoRV GATATC 2 cut(s) 12, 401
EcoT14I CCWWGG 1 cut(s) 229
EcoT22I ATGCAT 2 cut(s) 289, 836
EcoT38I GRGCYC 1 cut(s) 786
ErhI CCWWGG 1 cut(s) 229
FaeI CATG 8 cut(s) 43, 86, 131, 287, 488, 590, 707, 834
FalI AAGNNNNNCTT 6 cut(s) 158, 190, 377, 409, 848, 880
FaqI GGGAC 1 cut(s) 233
FatI CATG 8 cut(s) 39, 82, 127, 283, 484, 586, 703, 830
FauNDI CATATG 1 cut(s) 358
FbaI TGATCA 1 cut(s) 718
Fnu4HI GCNGC 1 cut(s) 690
FokI GGATG 2 cut(s) 165, 296
FriOI GRGCYC 1 cut(s) 786
Fsp4HI GCNGC 1 cut(s) 690
FspBI CTAG 2 cut(s) 747, 774
GluI GCNGC 1 cut(s) 690
HaeIII GGCC 1 cut(s) 122
HapII CCGG 1 cut(s) 761
Hin1II CATG 8 cut(s) 43, 86, 131, 287, 488, 590, 707, 834
HindIII AAGCTT 1 cut(s) 789
HinfI GANTC 6 cut(s) 142, 234, 337, 594, 641, 811
HpaII CCGG 1 cut(s) 761
HphI GGTGA 3 cut(s) 553, 623, 862
Hpy166II GTNNAC 4 cut(s) 88, 301, 477, 521
Hpy188I TCNGA 9 cut(s) 196, 327, 432, 593, 632, 646, 754, 769, 911
Hpy188III TCNNGA 3 cut(s) 182, 421, 886
Hpy8I GTNNAC 4 cut(s) 88, 301, 477, 521
HpyAV CCTTC 2 cut(s) 249, 681
HpyCH4III ACNGT 2 cut(s) 80, 481
HpyCH4V TGCA 8 cut(s) 178, 287, 309, 362, 438, 521, 713, 834
HpyF10VI GCNNNNNNNGC 2 cut(s) 175, 797
HpyF3I CTNAG 7 cut(s) 150, 195, 326, 645, 780, 805, 865
Hsp92II CATG 8 cut(s) 43, 86, 131, 287, 488, 590, 707, 834
Ksp22I TGATCA 1 cut(s) 718
Kzo9I GATC 4 cut(s) 417, 613, 718, 931
Lsp1109I GCAGC 1 cut(s) 701
LweI GCATC 6 cut(s) 51, 187, 318, 447, 700, 843
MaeI CTAG 2 cut(s) 747, 774
MalI GATC 4 cut(s) 419, 615, 720, 933
MboI GATC 4 cut(s) 417, 613, 718, 931
MboII GAAGA 5 cut(s) 202, 436, 550, 806, 926
MflI RGATCY 1 cut(s) 417
MhlI GDGCHC 2 cut(s) 523, 786
MnlI CCTC 5 cut(s) 217, 224, 381, 426, 846
Mph1103I ATGCAT 2 cut(s) 289, 836
MseI TTAA 1 cut(s) 290
MslI CAYNNNNRTG 2 cut(s) 128, 708
MspI CCGG 1 cut(s) 761
MvnI CGCG 1 cut(s) 800
MwoI GCNNNNNNNGC 2 cut(s) 175, 797
NdeI CATATG 1 cut(s) 358
NdeII GATC 4 cut(s) 417, 613, 718, 931
NlaIII CATG 8 cut(s) 43, 86, 131, 287, 488, 590, 707, 834
NlaIV GGNNCC 1 cut(s) 419
NsiI ATGCAT 2 cut(s) 289, 836
NspI RCATGY 1 cut(s) 707
PfeI GAWTC 6 cut(s) 142, 234, 337, 594, 641, 811
PkrI GCNGC 1 cut(s) 691
PpuMI RGGWCCY 1 cut(s) 226
PshBI ATTAAT 1 cut(s) 290
Psp5II RGGWCCY 1 cut(s) 226
PspN4I GGNNCC 1 cut(s) 419
PspPI GGNCC 1 cut(s) 226
PspPPI RGGWCCY 1 cut(s) 226
PsuI RGATCY 1 cut(s) 417
RsaI GTAC 6 cut(s) 200, 275, 476, 578, 650, 796
RsaNI GTAC 6 cut(s) 199, 274, 475, 577, 649, 795
RseI CAYNNNNRTG 2 cut(s) 128, 708
SaqAI TTAA 1 cut(s) 290
SatI GCNGC 1 cut(s) 690
Sau3AI GATC 4 cut(s) 417, 613, 718, 931
Sau96I GGNCC 1 cut(s) 226
SduI GDGCHC 2 cut(s) 523, 786
SetI ASST 9 cut(s) 231, 260, 437, 510, 727, 793, 852, 861, 871
SfaNI GCATC 6 cut(s) 51, 187, 318, 447, 700, 843
SinI GGWCC 1 cut(s) 226
SmiMI CAYNNNNRTG 2 cut(s) 128, 708
SmlI CTYRAG 1 cut(s) 394
SmoI CTYRAG 1 cut(s) 394
SsiI CCGC 1 cut(s) 798
SspI AATATT 1 cut(s) 318
SspMI CTAG 2 cut(s) 747, 774
StyI CCWWGG 1 cut(s) 229
TaaI ACNGT 2 cut(s) 80, 481
TaqI TCGA 3 cut(s) 237, 373, 616
TatI WGTACW 3 cut(s) 474, 576, 648
TfiI GAWTC 6 cut(s) 142, 234, 337, 594, 641, 811
Tru1I TTAA 1 cut(s) 290
Tru9I TTAA 1 cut(s) 290
TscAI CASTG 1 cut(s) 419
TseI GCWGC 1 cut(s) 689
TspRI CASTG 1 cut(s) 419
VneI GTGCAC 1 cut(s) 519
VpaK11BI GGWCC 1 cut(s) 226
VspI ATTAAT 1 cut(s) 290
XapI RAATTY 4 cut(s) 203, 241, 819, 879
XceI RCATGY 1 cut(s) 707
XspI CTAG 2 cut(s) 747, 774
Zsp2I ATGCAT 2 cut(s) 289, 836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.