pycom10g17010

Glutathione S-transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0029280
Physical Location & Seq
Reverse (-)
20185315 .. 20185638
324 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 324 bp
ATGGCGGATGAGGTTGTTCTTCTGGACTACTGGGCAAGCATGTTTGGCATGAGGGCCAGAGTAGCGCTGGCGGAGAAGGGCGTCAAGTATGAGTACAGAGAGGAGGACTTGAGGAATAAGATTAAGAGCCAGCTGCTTCTGCAGATGAACCCGGTCACAAGAAGATCCCGGTTCTCATTCATAACGGTAAGCCGGTCTGCGAGTCACTCATCATTGTGCAGTATATTGATGAGGTTTGGAGGGATAAAGCTCCTTTGCTTCCCTCTGAGCCTTACCAGAAAGCTCACTCAAGGTTCTGGGCTGATTTCATTGACAAGAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004364 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0006518 GO:0006575 GO:0006725 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0006979 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009266 GO:0009404 GO:0009407 GO:0009409 GO:0009414 GO:0009415 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009628 GO:0009635 GO:0009636 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016740 GO:0016765 GO:0018973 GO:0018974 GO:0019326 GO:0019439 GO:0019748 GO:0019899 GO:0031090 GO:0031668 GO:0033218 GO:0033554 GO:0034641 GO:0042221 GO:0042277 GO:0042537 GO:0042631 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043295 GO:0043603 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046256 GO:0046260 GO:0046263 GO:0046686 GO:0048037 GO:0048046 GO:0048583 GO:0050789 GO:0050896 GO:0051186 GO:0051716 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0071944 GO:0072341 GO:0072490 GO:0072491 GO:0080167 GO:0098588 GO:0098754 GO:0098805 GO:0104004 GO:1900750 GO:1901360 GO:1901361 GO:1901564 GO:1901575 GO:1901681 GO:1901700 GO:1901701 GO:2000030
KEGG Pathways
Metabolic & Signaling
ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418
Pfam Domains
Protein Families
GST_C GST_C_2 GST_N GST_N_3

Protein Analysis

108

Amino Acids

12.25

Weight (kDa)

10.47

Isoelectric Point (pI)

42.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 5 - 52 3.9e-07 Glutathione S-transferase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0029280)

Species Orthologous Gene IDs
pyrus_communis pycom05g19610 pycom10g17010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 5, 71
AclWI GGATC 1 cut(s) 159
AcyI GRCGYC 1 cut(s) 81
AfaI GTAC 1 cut(s) 95
AfeI AGCGCT 1 cut(s) 66
AluBI AGCT 3 cut(s) 133, 250, 283
AluI AGCT 3 cut(s) 133, 250, 283
AlwI GGATC 1 cut(s) 159
Aor51HI AGCGCT 1 cut(s) 66
AoxI GGCC 1 cut(s) 54
ApeKI GCWGC 1 cut(s) 133
AspLEI GCGC 1 cut(s) 67
AspS9I GGNCC 1 cut(s) 54
AsuC2I CCSGG 2 cut(s) 152, 169
BbvI GCAGC 1 cut(s) 120
BcnI CCSGG 2 cut(s) 152, 169
BfmI CTRYAG 1 cut(s) 140
BfoI RGCGCY 1 cut(s) 68
BisI GCNGC 1 cut(s) 134
BlsI GCNGC 1 cut(s) 135
Bme1390I CCNGG 2 cut(s) 152, 169
BmgT120I GGNCC 1 cut(s) 54
BmrFI CCNGG 2 cut(s) 152, 169
BmrI ACTGGG 1 cut(s) 40
BmuI ACTGGG 1 cut(s) 40
BpuEI CTTGAG 2 cut(s) 130, 273
BpuMI CCSGG 2 cut(s) 152, 169
BsaHI GRCGYC 1 cut(s) 81
Bse118I RCCGGY 1 cut(s) 192
Bse1I ACTGG 1 cut(s) 35
BseGI GGATG 1 cut(s) 13
BseMII CTCAG 1 cut(s) 257
BseNI ACTGG 1 cut(s) 35
BseRI GAGGAG 1 cut(s) 116
BseXI GCAGC 1 cut(s) 120
BsgI GTGCAG 1 cut(s) 238
BshFI GGCC 1 cut(s) 56
BsiSI CCGG 3 cut(s) 152, 169, 193
BsnI GGCC 1 cut(s) 56
Bsp143I GATC 1 cut(s) 164
BspACI CCGC 2 cut(s) 5, 71
BspANI GGCC 1 cut(s) 56
BspCNI CTCAG 1 cut(s) 258
BspMAI CTGCAG 1 cut(s) 144
BspPI GGATC 1 cut(s) 159
BsrFI RCCGGY 1 cut(s) 192
BsrI ACTGG 1 cut(s) 35
BssAI RCCGGY 1 cut(s) 192
BssMI GATC 1 cut(s) 164
BssNI GRCGYC 1 cut(s) 81
Bst4CI ACNGT 1 cut(s) 187
BstACI GRCGYC 1 cut(s) 81
BstC8I GCNNGC 3 cut(s) 37, 69, 131
BstDEI CTNAG 1 cut(s) 266
BstF5I GGATG 1 cut(s) 13
BstH2I RGCGCY 1 cut(s) 68
BstHHI GCGC 1 cut(s) 67
BstKTI GATC 1 cut(s) 167
BstMBI GATC 1 cut(s) 164
BstMWI GCNNNNNNNGC 3 cut(s) 45, 62, 139
BstNSI RCATGY 1 cut(s) 43
BstSCI CCNGG 2 cut(s) 150, 167
BstSFI CTRYAG 1 cut(s) 140
BstV1I GCAGC 1 cut(s) 120
BstX2I RGATCY 1 cut(s) 164
BstYI RGATCY 1 cut(s) 164
BsuRI GGCC 1 cut(s) 56
BtsCI GGATG 1 cut(s) 13
Cac8I GCNNGC 3 cut(s) 37, 69, 131
CfoI GCGC 1 cut(s) 67
Cfr10I RCCGGY 1 cut(s) 192
Cfr13I GGNCC 1 cut(s) 54
CseI GACGC 1 cut(s) 70
Csp6I GTAC 1 cut(s) 94
CviAII CATG 2 cut(s) 40, 49
CviJI RGCY 8 cut(s) 56, 129, 133, 192, 250, 270, 283, 301
CviKI_1 RGCY 8 cut(s) 56, 129, 133, 192, 250, 270, 283, 301
CviQI GTAC 1 cut(s) 94
DdeI CTNAG 1 cut(s) 266
DpnI GATC 1 cut(s) 166
DpnII GATC 1 cut(s) 164
EciI GGCGGA 2 cut(s) 20, 86
Eco47III AGCGCT 1 cut(s) 66
FaeI CATG 2 cut(s) 43, 52
FaiI YATR 5 cut(s) 41, 50, 90, 182, 224
FatI CATG 2 cut(s) 39, 48
Fnu4HI GCNGC 1 cut(s) 134
FokI GGATG 1 cut(s) 20
Fsp4HI GCNGC 1 cut(s) 134
GlaI GCGC 1 cut(s) 66
GluI GCNGC 1 cut(s) 134
HaeII RGCGCY 1 cut(s) 68
HaeIII GGCC 1 cut(s) 56
HapII CCGG 3 cut(s) 152, 169, 193
HgaI GACGC 1 cut(s) 70
HhaI GCGC 1 cut(s) 67
Hin1I GRCGYC 1 cut(s) 81
Hin1II CATG 2 cut(s) 43, 52
Hin6I GCGC 1 cut(s) 65
HinP1I GCGC 1 cut(s) 65
HinfI GANTC 1 cut(s) 202
HpaII CCGG 3 cut(s) 152, 169, 193
Hpy188I TCNGA 1 cut(s) 267
Hpy188III TCNNGA 1 cut(s) 23
HpyAV CCTTC 2 cut(s) 70, 312
HpyCH4III ACNGT 1 cut(s) 187
HpyCH4V TGCA 2 cut(s) 142, 219
HpyF10VI GCNNNNNNNGC 3 cut(s) 45, 62, 139
HpyF3I CTNAG 1 cut(s) 266
Hsp92I GRCGYC 1 cut(s) 81
Hsp92II CATG 2 cut(s) 43, 52
HspAI GCGC 1 cut(s) 65
Kzo9I GATC 1 cut(s) 164
LmnI GCTCC 1 cut(s) 255
Lsp1109I GCAGC 1 cut(s) 120
MaeIII GTNAC 2 cut(s) 154, 203
MalI GATC 1 cut(s) 166
MboI GATC 1 cut(s) 164
MboII GAAGA 2 cut(s) 11, 174
MflI RGATCY 1 cut(s) 164
MlyI GAGTC 1 cut(s) 211
MnlI CCTC 8 cut(s) 4, 45, 94, 97, 105, 225, 233, 273
MseI TTAA 1 cut(s) 123
MslI CAYNNNNRTG 1 cut(s) 214
MspA1I CMGCKG 1 cut(s) 133
MspI CCGG 3 cut(s) 152, 169, 193
MspR9I CCNGG 2 cut(s) 152, 169
MwoI GCNNNNNNNGC 3 cut(s) 45, 62, 139
NciI CCSGG 2 cut(s) 152, 169
NdeII GATC 1 cut(s) 164
NlaIII CATG 2 cut(s) 43, 52
NmuCI GTSAC 2 cut(s) 154, 203
NspI RCATGY 1 cut(s) 43
PkrI GCNGC 1 cut(s) 135
PleI GAGTC 1 cut(s) 210
PpsI GAGTC 1 cut(s) 210
PspPI GGNCC 1 cut(s) 54
PstI CTGCAG 1 cut(s) 144
PsuI RGATCY 1 cut(s) 164
PvuII CAGCTG 1 cut(s) 133
RsaI GTAC 1 cut(s) 95
RsaNI GTAC 1 cut(s) 94
RseI CAYNNNNRTG 1 cut(s) 214
SaqAI TTAA 1 cut(s) 123
SatI GCNGC 1 cut(s) 134
Sau3AI GATC 1 cut(s) 164
Sau96I GGNCC 1 cut(s) 54
SchI GAGTC 1 cut(s) 211
ScrFI CCNGG 2 cut(s) 152, 169
SetI ASST 7 cut(s) 15, 135, 236, 252, 285, 295, 323
SfcI CTRYAG 1 cut(s) 140
SmiMI CAYNNNNRTG 1 cut(s) 214
SmlI CTYRAG 2 cut(s) 109, 288
SmoI CTYRAG 2 cut(s) 109, 288
SsiI CCGC 2 cut(s) 5, 71
StyD4I CCNGG 2 cut(s) 150, 167
TaaI ACNGT 1 cut(s) 187
TatI WGTACW 1 cut(s) 93
Tru1I TTAA 1 cut(s) 123
Tru9I TTAA 1 cut(s) 123
TseFI GTSAC 2 cut(s) 154, 203
TseI GCWGC 1 cut(s) 133
Tsp45I GTSAC 2 cut(s) 154, 203
TspDTI ATGAA 3 cut(s) 161, 169, 297
XceI RCATGY 1 cut(s) 43
XcmI CCANNNNNNNNNTGG 1 cut(s) 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.