pycom10g21210

BAG family molecular chaperone regulator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
N/A
Physical Location & Seq
Reverse (-)
23908643 .. 23911070
2428 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 618 bp
ATGCTGGTCCAGAAAAGAGGAGAGAAATCCGACGCTCCGGTTCCGAATTTGTGTCTCCGGATTTCATTCGGCGCTCTCCATTACGAGATATCGGCCAGCGCTCAGTTCACATTCGGGGAGTTGAAGGCTCTTACGGCGAAGACAGGGCTACAGCCTGGCGAGTACTTGGACATGTGCAGAGTCAAAGGCCGTTCAAAAGTCGTACTGATGGAGGACCCAGCGAGCATCGAGAGGAGGCCCGTTGAGATGCGGAGGAATGCCAAGATCCAGACCGCACATCGCGCCATACTGGACGTATCCATGGAGGTTGACAAGCTCGCGGAGCAGGTCTCGGCAATTGAAAAATCCATATTAAATAATGGTGTCAAAGTACCAGAACTTCAGATAACCACACTAATTGAGATGCTCATGAGACAAGCAATCAAGCTGGACAACATTTCTGCAGAAGGAGATGCTTCTGCTCAAAAGAATTTGCAGGGCAGGGGGGTGCAGAAATGTGTTGAAAGTCTGGATATGCTGAAGATATCAAATGCAAAGGTAAAGCCTGTTGTTGTGACAACCAAGTGGGCGACTTTCGACCCTCCTCCAACCACAGCTAAATGGGAGTTTTTCGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAG ubiquitin

Protein Analysis

206

Amino Acids

22.76

Weight (kDa)

8.94

Isoelectric Point (pI)

43.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAG PF02179 96 - 172 2.2e-11 BAG domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 316
AccII CGCG 2 cut(s) 282, 320
AccIII TCCGGA 1 cut(s) 57
AciI CCGC 3 cut(s) 250, 273, 320
AclWI GGATC 1 cut(s) 259
AcoI YGGCCR 1 cut(s) 93
AcsI RAATTY 2 cut(s) 46, 469
AcuI CTGAAG 2 cut(s) 365, 539
AfaI GTAC 3 cut(s) 164, 204, 372
AfeI AGCGCT 1 cut(s) 100
AflIII ACRYGT 1 cut(s) 171
AgsI TTSAA 4 cut(s) 124, 195, 341, 503
AjnI CCWGG 1 cut(s) 154
AluBI AGCT 3 cut(s) 316, 427, 596
AluI AGCT 3 cut(s) 316, 427, 596
Alw26I GTCTC 3 cut(s) 59, 334, 406
AlwI GGATC 1 cut(s) 259
Aor13HI TCCGGA 1 cut(s) 57
Aor51HI AGCGCT 1 cut(s) 100
AoxI GGCC 3 cut(s) 93, 187, 236
ApoI RAATTY 2 cut(s) 46, 469
AspLEI GCGC 3 cut(s) 74, 101, 284
AspS9I GGNCC 3 cut(s) 7, 214, 237
AvaII GGWCC 2 cut(s) 7, 214
BarI GAAGNNNNNNTAC 2 cut(s) 363, 395
BbsI GAAGAC 1 cut(s) 146
BccI CCATC 1 cut(s) 202
BceAI ACGGC 2 cut(s) 150, 174
BciT130I CCWGG 1 cut(s) 156
BciVI GTATCC 1 cut(s) 307
BcoDI GTCTC 3 cut(s) 59, 334, 406
BfmI CTRYAG 2 cut(s) 149, 441
BfoI RGCGCY 2 cut(s) 75, 102
BfuAI ACCTGC 1 cut(s) 316
BfuI GTATCC 1 cut(s) 307
BmcAI AGTACT 1 cut(s) 164
Bme1390I CCNGG 1 cut(s) 156
Bme18I GGWCC 2 cut(s) 7, 214
BmgT120I GGNCC 3 cut(s) 7, 214, 237
BmiI GGNNCC 2 cut(s) 42, 216
BmrFI CCNGG 1 cut(s) 156
BmsI GCATC 4 cut(s) 234, 237, 393, 442
BpiI GAAGAC 1 cut(s) 146
BplI GAGNNNNNCTC 2 cut(s) 314, 346
BsaI GGTCTC 1 cut(s) 334
BsaJI CCNNGG 1 cut(s) 300
BsaWI WCCGGW 2 cut(s) 37, 57
Bse1I ACTGG 1 cut(s) 294
BseAI TCCGGA 1 cut(s) 57
BseBI CCWGG 1 cut(s) 156
BseDI CCNNGG 1 cut(s) 300
BseMII CTCAG 1 cut(s) 116
BseNI ACTGG 1 cut(s) 294
BseRI GAGGAG 3 cut(s) 33, 247, 573
BseYI CCCAGC 1 cut(s) 217
BsgI GTGCAG 2 cut(s) 196, 509
Bsh1236I CGCG 2 cut(s) 282, 320
BshFI GGCC 3 cut(s) 95, 189, 238
BsiSI CCGG 2 cut(s) 38, 58
BsmAI GTCTC 3 cut(s) 59, 334, 406
BsmI GAATGC 1 cut(s) 262
BsnI GGCC 3 cut(s) 95, 189, 238
Bso31I GGTCTC 1 cut(s) 334
Bsp13I TCCGGA 1 cut(s) 57
Bsp143I GATC 1 cut(s) 264
Bsp19I CCATGG 1 cut(s) 300
BspACI CCGC 3 cut(s) 250, 273, 320
BspANI GGCC 3 cut(s) 95, 189, 238
BspCNI CTCAG 1 cut(s) 115
BspEI TCCGGA 1 cut(s) 57
BspFNI CGCG 2 cut(s) 282, 320
BspHI TCATGA 1 cut(s) 408
BspLI GGNNCC 2 cut(s) 42, 216
BspMAI CTGCAG 1 cut(s) 445
BspMI ACCTGC 1 cut(s) 316
BspPI GGATC 1 cut(s) 259
BspTNI GGTCTC 1 cut(s) 334
BsrI ACTGG 1 cut(s) 294
BssECI CCNNGG 1 cut(s) 300
BssMI GATC 1 cut(s) 264
BssT1I CCWWGG 1 cut(s) 300
Bst2UI CCWGG 1 cut(s) 156
BstC8I GCNNGC 3 cut(s) 97, 223, 318
BstDEI CTNAG 1 cut(s) 102
BstDSI CCRYGG 1 cut(s) 300
BstFNI CGCG 2 cut(s) 282, 320
BstH2I RGCGCY 2 cut(s) 75, 102
BstHHI GCGC 3 cut(s) 74, 101, 284
BstKTI GATC 1 cut(s) 267
BstMAI GTCTC 3 cut(s) 59, 334, 406
BstMBI GATC 1 cut(s) 264
BstMWI GCNNNNNNNGC 3 cut(s) 134, 281, 322
BstNI CCWGG 1 cut(s) 156
BstNSI RCATGY 1 cut(s) 175
BstSCI CCNGG 1 cut(s) 154
BstSFI CTRYAG 2 cut(s) 149, 441
BstUI CGCG 2 cut(s) 282, 320
BstV2I GAAGAC 1 cut(s) 146
BstX2I RGATCY 1 cut(s) 264
BstYI RGATCY 1 cut(s) 264
BsuI GTATCC 1 cut(s) 307
BsuRI GGCC 3 cut(s) 95, 189, 238
BtgI CCRYGG 1 cut(s) 300
BtgZI GCGATG 1 cut(s) 263
BveI ACCTGC 1 cut(s) 316
Cac8I GCNNGC 3 cut(s) 97, 223, 318
CciI TCATGA 1 cut(s) 408
CfoI GCGC 3 cut(s) 74, 101, 284
Cfr13I GGNCC 3 cut(s) 7, 214, 237
CseI GACGC 1 cut(s) 41
Csp6I GTAC 3 cut(s) 163, 203, 371
CspCI CAANNNNNGTGG 2 cut(s) 379, 414
CviAII CATG 3 cut(s) 172, 301, 409
CviQI GTAC 3 cut(s) 163, 203, 371
DdeI CTNAG 1 cut(s) 102
DpnI GATC 1 cut(s) 266
DpnII GATC 1 cut(s) 264
EaeI YGGCCR 1 cut(s) 93
Eco130I CCWWGG 1 cut(s) 300
Eco31I GGTCTC 1 cut(s) 334
Eco32I GATATC 2 cut(s) 90, 525
Eco47I GGWCC 2 cut(s) 7, 214
Eco47III AGCGCT 1 cut(s) 100
Eco57I CTGAAG 2 cut(s) 365, 539
EcoO109I RGGNCCY 1 cut(s) 214
EcoRII CCWGG 1 cut(s) 154
EcoRV GATATC 2 cut(s) 90, 525
EcoT14I CCWWGG 1 cut(s) 300
ErhI CCWWGG 1 cut(s) 300
FaeI CATG 3 cut(s) 175, 304, 412
FaiI YATR 6 cut(s) 173, 287, 302, 350, 410, 515
FatI CATG 3 cut(s) 171, 300, 408
GlaI GCGC 3 cut(s) 73, 100, 283
GsaI CCCAGC 1 cut(s) 221
HaeII RGCGCY 2 cut(s) 75, 102
HaeIII GGCC 3 cut(s) 95, 189, 238
HapII CCGG 2 cut(s) 38, 58
HgaI GACGC 1 cut(s) 41
HhaI GCGC 3 cut(s) 74, 101, 284
Hin1II CATG 3 cut(s) 175, 304, 412
Hin6I GCGC 3 cut(s) 72, 99, 282
HinP1I GCGC 3 cut(s) 72, 99, 282
HincII GTYRAC 1 cut(s) 310
HindII GTYRAC 1 cut(s) 310
HinfI GANTC 1 cut(s) 180
HpaII CCGG 2 cut(s) 38, 58
Hpy166II GTNNAC 2 cut(s) 108, 310
Hpy188I TCNGA 3 cut(s) 31, 45, 384
Hpy188III TCNNGA 6 cut(s) 10, 58, 229, 268, 409, 509
Hpy8I GTNNAC 2 cut(s) 108, 310
Hpy99I CGWCG 1 cut(s) 35
HpyAV CCTTC 2 cut(s) 118, 440
HpyCH4IV ACGT 1 cut(s) 294
HpyCH4V TGCA 5 cut(s) 177, 443, 475, 490, 533
HpyF10VI GCNNNNNNNGC 3 cut(s) 134, 281, 322
HpyF3I CTNAG 1 cut(s) 102
HpySE526I ACGT 1 cut(s) 294
Hsp92II CATG 3 cut(s) 175, 304, 412
HspAI GCGC 3 cut(s) 72, 99, 282
Kpn2I TCCGGA 1 cut(s) 57
Kzo9I GATC 1 cut(s) 264
LmnI GCTCC 2 cut(s) 40, 322
LweI GCATC 4 cut(s) 234, 237, 393, 442
MaeII ACGT 1 cut(s) 294
MaeIII GTNAC 1 cut(s) 553
MalI GATC 1 cut(s) 266
MboI GATC 1 cut(s) 264
MboII GAAGA 2 cut(s) 151, 532
MfeI CAATTG 1 cut(s) 336
MflI RGATCY 1 cut(s) 264
MluCI AATT 4 cut(s) 46, 336, 396, 469
MlyI GAGTC 1 cut(s) 189
MmeI TCCRAC 2 cut(s) 54, 611
MnlI CCTC 8 cut(s) 11, 205, 225, 228, 246, 298, 591, 594
MroI TCCGGA 1 cut(s) 57
MseI TTAA 2 cut(s) 353, 616
MspI CCGG 2 cut(s) 38, 58
MspR9I CCNGG 1 cut(s) 156
MunI CAATTG 1 cut(s) 336
Mva1269I GAATGC 1 cut(s) 262
MvaI CCWGG 1 cut(s) 156
MvnI CGCG 2 cut(s) 282, 320
MwoI GCNNNNNNNGC 3 cut(s) 134, 281, 322
NcoI CCATGG 1 cut(s) 300
NdeII GATC 1 cut(s) 264
NlaIII CATG 3 cut(s) 175, 304, 412
NlaIV GGNNCC 2 cut(s) 42, 216
NmeAIII GCCGAG 1 cut(s) 311
NmuCI GTSAC 1 cut(s) 553
NspI RCATGY 1 cut(s) 175
PagI TCATGA 1 cut(s) 408
PciI ACATGT 1 cut(s) 171
PctI GAATGC 1 cut(s) 262
PleI GAGTC 1 cut(s) 188
PpsI GAGTC 1 cut(s) 188
PpuMI RGGWCCY 1 cut(s) 214
PscI ACATGT 1 cut(s) 171
Psp5II RGGWCCY 1 cut(s) 214
Psp6I CCWGG 1 cut(s) 154
PspFI CCCAGC 1 cut(s) 217
PspGI CCWGG 1 cut(s) 154
PspN4I GGNNCC 2 cut(s) 42, 216
PspPI GGNCC 3 cut(s) 7, 214, 237
PspPPI RGGWCCY 1 cut(s) 214
PstI CTGCAG 1 cut(s) 445
PsuI RGATCY 1 cut(s) 264
RsaI GTAC 3 cut(s) 164, 204, 372
RsaNI GTAC 3 cut(s) 163, 203, 371
SaqAI TTAA 2 cut(s) 353, 616
Sau3AI GATC 1 cut(s) 264
Sau96I GGNCC 3 cut(s) 7, 214, 237
ScaI AGTACT 1 cut(s) 164
SchI GAGTC 1 cut(s) 189
ScrFI CCNGG 1 cut(s) 156
SetI ASST 7 cut(s) 297, 309, 318, 330, 429, 540, 598
SfaNI GCATC 4 cut(s) 234, 237, 393, 442
SfcI CTRYAG 2 cut(s) 149, 441
SinI GGWCC 2 cut(s) 7, 214
Sse9I AATT 4 cut(s) 46, 336, 396, 469
SsiI CCGC 3 cut(s) 250, 273, 320
StyD4I CCNGG 1 cut(s) 154
StyI CCWWGG 1 cut(s) 300
TaiI ACGT 1 cut(s) 297
TaqI TCGA 3 cut(s) 228, 576, 612
TasI AATT 4 cut(s) 46, 336, 396, 469
TatI WGTACW 1 cut(s) 162
Tru1I TTAA 2 cut(s) 353, 616
Tru9I TTAA 2 cut(s) 353, 616
TseFI GTSAC 1 cut(s) 553
Tsp45I GTSAC 1 cut(s) 553
TspDTI ATGAA 1 cut(s) 54
VpaK11BI GGWCC 2 cut(s) 7, 214
XapI RAATTY 2 cut(s) 46, 469
XceI RCATGY 1 cut(s) 175
ZrmI AGTACT 1 cut(s) 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.