pycom10g26590

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
N/A
Physical Location & Seq
Reverse (-)
27887473 .. 27887718
246 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 246 bp
ATGGAAACTTGCCCAACAGCAGAGGTTTTGAAGTGCATGAATATTGGTCTTTTGTGTGTCCAGGAAGACCCTGCAGAGAGACCTACAATGTCAACTGTGGTTGTATTGCTGGGAAGTGAATCCATAGATCTTCCTGAACCAAAGCAACCGCCCATATTTGCTGTACGAAGAGTTGCCCCAATCAGTGAGTCTACAACTGATCCTGCTTCAAATGGGCTCACTTTTTCCATCATTTCGCCGAGGTGA

Protein Analysis

82

Amino Acids

8.7

Weight (kDa)

4.53

Isoelectric Point (pI)

74.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 191
AciI CCGC 1 cut(s) 149
AclWI GGATC 1 cut(s) 194
AfaI GTAC 1 cut(s) 165
AgsI TTSAA 2 cut(s) 31, 210
AjnI CCWGG 1 cut(s) 60
Alw26I GTCTC 1 cut(s) 73
AlwI GGATC 1 cut(s) 194
BanII GRGCYC 1 cut(s) 219
BbsI GAAGAC 1 cut(s) 72
BccI CCATC 1 cut(s) 236
BciT130I CCWGG 1 cut(s) 62
BcoDI GTCTC 1 cut(s) 73
BfmI CTRYAG 1 cut(s) 72
BglII AGATCT 1 cut(s) 127
Bme1390I CCNGG 1 cut(s) 62
BmrFI CCNGG 1 cut(s) 62
BpiI GAAGAC 1 cut(s) 72
BsaI GGTCTC 1 cut(s) 73
BsaJI CCNNGG 1 cut(s) 239
BseBI CCWGG 1 cut(s) 62
BseDI CCNNGG 1 cut(s) 239
BseYI CCCAGC 1 cut(s) 109
BsmAI GTCTC 1 cut(s) 73
Bso31I GGTCTC 1 cut(s) 73
Bsp1286I GDGCHC 1 cut(s) 219
Bsp143I GATC 2 cut(s) 127, 199
BspACI CCGC 1 cut(s) 149
BspMAI CTGCAG 1 cut(s) 76
BspPI GGATC 1 cut(s) 194
BspTNI GGTCTC 1 cut(s) 73
BssECI CCNNGG 1 cut(s) 239
BssMI GATC 2 cut(s) 127, 199
Bst2UI CCWGG 1 cut(s) 62
Bst4CI ACNGT 1 cut(s) 97
Bst6I CTCTTC 1 cut(s) 163
BstKTI GATC 2 cut(s) 130, 202
BstMAI GTCTC 1 cut(s) 73
BstMBI GATC 2 cut(s) 127, 199
BstNI CCWGG 1 cut(s) 62
BstSCI CCNGG 1 cut(s) 60
BstSFI CTRYAG 1 cut(s) 72
BstV2I GAAGAC 1 cut(s) 72
BstX2I RGATCY 1 cut(s) 127
BstYI RGATCY 1 cut(s) 127
BtsIMutI CAGTG 1 cut(s) 190
Csp6I GTAC 1 cut(s) 164
CviAII CATG 1 cut(s) 37
CviJI RGCY 1 cut(s) 217
CviKI_1 RGCY 1 cut(s) 217
CviQI GTAC 1 cut(s) 164
DpnI GATC 2 cut(s) 129, 201
DpnII GATC 2 cut(s) 127, 199
Eam1104I CTCTTC 1 cut(s) 163
EarI CTCTTC 1 cut(s) 163
Eco24I GRGCYC 1 cut(s) 219
Eco31I GGTCTC 1 cut(s) 73
EcoRII CCWGG 1 cut(s) 60
EcoT38I GRGCYC 1 cut(s) 219
FaeI CATG 1 cut(s) 40
FaiI YATR 3 cut(s) 38, 125, 155
FatI CATG 1 cut(s) 36
FblI GTMKAC 1 cut(s) 191
FriOI GRGCYC 1 cut(s) 219
GsaI CCCAGC 1 cut(s) 113
Hin1II CATG 1 cut(s) 40
HincII GTYRAC 1 cut(s) 93
HindII GTYRAC 1 cut(s) 93
HinfI GANTC 2 cut(s) 119, 188
Hpy166II GTNNAC 2 cut(s) 93, 192
Hpy188III TCNNGA 1 cut(s) 134
Hpy8I GTNNAC 2 cut(s) 93, 192
HpyCH4III ACNGT 1 cut(s) 97
HpyCH4V TGCA 2 cut(s) 36, 74
Hsp92II CATG 1 cut(s) 40
Kzo9I GATC 2 cut(s) 127, 199
LpnPI CCDG 6 cut(s) 47, 74, 84, 95, 147, 216
MalI GATC 2 cut(s) 129, 201
MboI GATC 2 cut(s) 127, 199
MboII GAAGA 3 cut(s) 77, 122, 180
MflI RGATCY 1 cut(s) 127
MhlI GDGCHC 1 cut(s) 219
MlyI GAGTC 1 cut(s) 197
MnlI CCTC 2 cut(s) 16, 234
MspR9I CCNGG 1 cut(s) 62
MvaI CCWGG 1 cut(s) 62
NdeII GATC 2 cut(s) 127, 199
NlaIII CATG 1 cut(s) 40
PfeI GAWTC 1 cut(s) 119
PfoI TCCNGGA 1 cut(s) 60
PleI GAGTC 1 cut(s) 196
PpsI GAGTC 1 cut(s) 196
Psp6I CCWGG 1 cut(s) 60
PspFI CCCAGC 1 cut(s) 109
PspGI CCWGG 1 cut(s) 60
PstI CTGCAG 1 cut(s) 76
PsuI RGATCY 1 cut(s) 127
RsaI GTAC 1 cut(s) 165
RsaNI GTAC 1 cut(s) 164
Sau3AI GATC 2 cut(s) 127, 199
SchI GAGTC 1 cut(s) 197
ScrFI CCNGG 1 cut(s) 62
SduI GDGCHC 1 cut(s) 219
SetI ASST 3 cut(s) 27, 85, 245
SfcI CTRYAG 1 cut(s) 72
SgeI CNNG 8 cut(s) 21, 49, 73, 74, 83, 122, 146, 215
SsiI CCGC 1 cut(s) 149
SspI AATATT 1 cut(s) 43
StyD4I CCNGG 1 cut(s) 60
TaaI ACNGT 1 cut(s) 97
TfiI GAWTC 1 cut(s) 119
TscAI CASTG 1 cut(s) 190
TspDTI ATGAA 1 cut(s) 53
TspRI CASTG 1 cut(s) 190
XmiI GTMKAC 1 cut(s) 191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.