pycom111g02490

Universal stress protein A-like protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
N/A
Physical Location & Seq
Reverse (-)
1478504 .. 1478808
305 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 261 bp
ATGGCGAATGAGCCAACTCGGATAATGCTGGGAGTGAACGAGTCGACCATCAAGGGCTACCCGCACGCCTCGATCATCAGCAGGAAGTGGCTTCAAGCTCCAGTTCCTTCACGTTCAAGTCCCCGACGAAGACGGTCATCTCTCTCACTATCACTCTCTCTTTCTGCTTTTACTTTTATGTTTTTGCTTGTTATAATTGTGCTTGTGCTCTGTTTGGTTGCTGAGAAAACGGAGGAATTTGAAGAGAAAATGAAAGGATAG

Protein Analysis

87

Amino Acids

9.7

Weight (kDa)

10.01

Isoelectric Point (pI)

87.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 194
AccI GTMKAC 1 cut(s) 44
AciI CCGC 1 cut(s) 62
AcsI RAATTY 1 cut(s) 236
AgsI TTSAA 3 cut(s) 95, 117, 242
AluBI AGCT 1 cut(s) 98
AluI AGCT 1 cut(s) 98
Alw21I GWGCWC 1 cut(s) 210
ApoI RAATTY 1 cut(s) 236
BbsI GAAGAC 1 cut(s) 136
Bbv12I GWGCWC 1 cut(s) 210
BccI CCATC 1 cut(s) 56
BpiI GAAGAC 1 cut(s) 136
BpmI CTGGAG 1 cut(s) 84
Bse1I ACTGG 1 cut(s) 101
BseMII CTCAG 1 cut(s) 213
BseNI ACTGG 1 cut(s) 101
BseYI CCCAGC 1 cut(s) 28
BsiHKAI GWGCWC 1 cut(s) 210
BslFI GGGAC 1 cut(s) 105
BsmFI GGGAC 1 cut(s) 105
Bsp1286I GDGCHC 1 cut(s) 210
Bsp143I GATC 1 cut(s) 72
BspACI CCGC 1 cut(s) 62
BspCNI CTCAG 1 cut(s) 214
BsrI ACTGG 1 cut(s) 101
BssMI GATC 1 cut(s) 72
Bst4CI ACNGT 1 cut(s) 135
Bst6I CTCTTC 1 cut(s) 237
BstC8I GCNNGC 1 cut(s) 66
BstDEI CTNAG 1 cut(s) 222
BstKTI GATC 1 cut(s) 75
BstMBI GATC 1 cut(s) 72
BstV2I GAAGAC 1 cut(s) 136
Cac8I GCNNGC 1 cut(s) 66
CviJI RGCY 4 cut(s) 13, 57, 91, 98
CviKI_1 RGCY 4 cut(s) 13, 57, 91, 98
DdeI CTNAG 1 cut(s) 222
DpnI GATC 1 cut(s) 74
DpnII GATC 1 cut(s) 72
Eam1104I CTCTTC 1 cut(s) 237
EarI CTCTTC 1 cut(s) 237
FaiI YATR 2 cut(s) 179, 194
FaqI GGGAC 1 cut(s) 105
FauI CCCGC 1 cut(s) 69
FblI GTMKAC 1 cut(s) 44
GsaI CCCAGC 1 cut(s) 32
GsuI CTGGAG 1 cut(s) 84
HincII GTYRAC 1 cut(s) 45
HindII GTYRAC 1 cut(s) 45
HinfI GANTC 1 cut(s) 41
Hpy166II GTNNAC 2 cut(s) 37, 45
Hpy188I TCNGA 1 cut(s) 21
Hpy8I GTNNAC 2 cut(s) 37, 45
Hpy99I CGWCG 1 cut(s) 129
HpyAV CCTTC 1 cut(s) 117
HpyCH4III ACNGT 1 cut(s) 135
HpyCH4IV ACGT 1 cut(s) 112
HpyF3I CTNAG 1 cut(s) 222
HpySE526I ACGT 1 cut(s) 112
Kzo9I GATC 1 cut(s) 72
LmnI GCTCC 1 cut(s) 103
LpnPI CCDG 3 cut(s) 14, 67, 114
MaeII ACGT 1 cut(s) 112
MalI GATC 1 cut(s) 74
MboI GATC 1 cut(s) 72
MboII GAAGA 2 cut(s) 141, 254
MhlI GDGCHC 1 cut(s) 210
MluCI AATT 2 cut(s) 195, 236
MlyI GAGTC 1 cut(s) 50
MnlI CCTC 2 cut(s) 79, 226
NdeII GATC 1 cut(s) 72
PleI GAGTC 1 cut(s) 49
PpsI GAGTC 1 cut(s) 49
PsiI TTATAA 1 cut(s) 194
PspFI CCCAGC 1 cut(s) 28
SalI GTCGAC 1 cut(s) 43
Sau3AI GATC 1 cut(s) 72
SchI GAGTC 1 cut(s) 50
SduI GDGCHC 1 cut(s) 210
SetI ASST 2 cut(s) 100, 115
Sse9I AATT 2 cut(s) 195, 236
SsiI CCGC 1 cut(s) 62
TaaI ACNGT 1 cut(s) 135
TaiI ACGT 1 cut(s) 115
TaqI TCGA 2 cut(s) 44, 71
TasI AATT 2 cut(s) 195, 236
TspGWI ACGGA 1 cut(s) 245
XapI RAATTY 1 cut(s) 236
XmiI GTMKAC 1 cut(s) 44
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.