pycom11g01410

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
N/A
Physical Location & Seq
Reverse (-)
1221757 .. 1222095
339 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 339 bp
ATGAAGCCACCCATCAAAGAGTATGGATTCGAAGAACACGTTTTACCTGATAAGTTCTTGGGAAAAGTTGGGCATAAAGGAAAATTGGTTAAATGGAGTCCACAAGAGCAGGTTTTAGCTCACCCATCTATCGCATGTTTTGTAACTCACTGTGGCTGGAACTCTTCAGTTGAAGCACTCACTTCAGGCGTGCCAGTTGTGACATTTCCTCAGTGGGGTGACCAAGTCACCAATGCAAAGTTCTTAGTGGATGTGTTTGGTGTAGGGCTTAGATTGAGCCGTGAGGCGGCTGAGAATAGATTGAGCATGAGAGACGAGGTAGGGAAGTGTTTGTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

113

Amino Acids

12.42

Weight (kDa)

7.76

Isoelectric Point (pI)

29.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 23 - 87 5.9e-19 UDP-glucoronosyl and UDP-glucosyl transferase
EryCIII-like_C PF06722 24 - 97 4e-06 Erythromycin biosynthesis protein CIII-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 100
AciI CCGC 1 cut(s) 287
AcuI CTGAAG 2 cut(s) 150, 168
AfiI CCNNNNNNNGG 2 cut(s) 215, 286
AflIII ACRYGT 1 cut(s) 37
AgsI TTSAA 1 cut(s) 173
AjuI GAANNNNNNNTTGG 2 cut(s) 224, 256
AluBI AGCT 1 cut(s) 119
AluI AGCT 1 cut(s) 119
Alw26I GTCTC 1 cut(s) 306
AsuHPI GGTGA 3 cut(s) 113, 220, 230
AsuII TTCGAA 1 cut(s) 30
BccI CCATC 2 cut(s) 20, 133
BceAI ACGGC 1 cut(s) 264
BcoDI GTCTC 1 cut(s) 306
BfuAI ACCTGC 1 cut(s) 100
BisI GCNGC 1 cut(s) 288
BlsI GCNGC 1 cut(s) 289
Bpu14I TTCGAA 1 cut(s) 30
Bsc4I CCNNNNNNNGG 2 cut(s) 215, 286
Bse1I ACTGG 1 cut(s) 194
BseGI GGATG 1 cut(s) 256
BseLI CCNNNNNNNGG 2 cut(s) 215, 286
BseMII CTCAG 2 cut(s) 224, 282
BseNI ACTGG 1 cut(s) 194
BslI CCNNNNNNNGG 2 cut(s) 215, 286
BsmAI GTCTC 1 cut(s) 306
BsmBI CGTCTC 1 cut(s) 306
Bsp119I TTCGAA 1 cut(s) 30
BspACI CCGC 1 cut(s) 287
BspCNI CTCAG 2 cut(s) 223, 283
BspMI ACCTGC 1 cut(s) 100
BspT104I TTCGAA 1 cut(s) 30
BsrI ACTGG 1 cut(s) 194
Bst4CI ACNGT 1 cut(s) 152
Bst6I CTCTTC 1 cut(s) 169
BstBI TTCGAA 1 cut(s) 30
BstC8I GCNNGC 1 cut(s) 191
BstDEI CTNAG 4 cut(s) 210, 244, 269, 291
BstEII GGTNACC 1 cut(s) 218
BstF5I GGATG 1 cut(s) 256
BstMAI GTCTC 1 cut(s) 306
BstNSI RCATGY 1 cut(s) 138
BstPI GGTNACC 1 cut(s) 218
BtsCI GGATG 1 cut(s) 256
BtsIMutI CAGTG 2 cut(s) 148, 218
BveI ACCTGC 1 cut(s) 100
Cac8I GCNNGC 1 cut(s) 191
CviAII CATG 2 cut(s) 135, 307
CviJI RGCY 6 cut(s) 7, 119, 156, 268, 279, 290
CviKI_1 RGCY 6 cut(s) 7, 119, 156, 268, 279, 290
DdeI CTNAG 4 cut(s) 210, 244, 269, 291
Eam1104I CTCTTC 1 cut(s) 169
EarI CTCTTC 1 cut(s) 169
Eco57I CTGAAG 2 cut(s) 150, 168
Eco91I GGTNACC 1 cut(s) 218
EcoO65I GGTNACC 1 cut(s) 218
Esp3I CGTCTC 1 cut(s) 306
FaeI CATG 2 cut(s) 138, 310
FaiI YATR 4 cut(s) 24, 75, 136, 308
FatI CATG 2 cut(s) 134, 306
Fnu4HI GCNGC 1 cut(s) 288
FokI GGATG 1 cut(s) 263
Fsp4HI GCNGC 1 cut(s) 288
GluI GCNGC 1 cut(s) 288
Hin1II CATG 2 cut(s) 138, 310
HinfI GANTC 2 cut(s) 27, 97
HphI GGTGA 3 cut(s) 113, 220, 230
Hpy166II GTNNAC 1 cut(s) 101
Hpy8I GTNNAC 1 cut(s) 101
HpyCH4III ACNGT 1 cut(s) 152
HpyCH4IV ACGT 1 cut(s) 39
HpyCH4V TGCA 1 cut(s) 236
HpyF3I CTNAG 4 cut(s) 210, 244, 269, 291
HpySE526I ACGT 1 cut(s) 39
Hsp92II CATG 2 cut(s) 138, 310
LpnPI CCDG 5 cut(s) 60, 95, 142, 171, 207
MaeII ACGT 1 cut(s) 39
MaeIII GTNAC 4 cut(s) 142, 199, 218, 226
MboII GAAGA 2 cut(s) 44, 156
MluCI AATT 1 cut(s) 83
MlyI GAGTC 1 cut(s) 106
MnlI CCTC 3 cut(s) 219, 277, 310
MseI TTAA 1 cut(s) 90
NlaIII CATG 2 cut(s) 138, 310
NmuCI GTSAC 3 cut(s) 199, 218, 226
NspI RCATGY 1 cut(s) 138
NspV TTCGAA 1 cut(s) 30
PcsI WCGNNNNNNNCGW 1 cut(s) 36
PfeI GAWTC 1 cut(s) 27
PflFI GACNNNGTC 1 cut(s) 224
PkrI GCNGC 1 cut(s) 289
PleI GAGTC 1 cut(s) 105
PpsI GAGTC 1 cut(s) 105
PspEI GGTNACC 1 cut(s) 218
PsrI GAACNNNNNNTAC 2 cut(s) 27, 59
PsyI GACNNNGTC 1 cut(s) 224
SaqAI TTAA 1 cut(s) 90
SatI GCNGC 1 cut(s) 288
SchI GAGTC 1 cut(s) 106
SetI ASST 5 cut(s) 42, 49, 114, 121, 321
SfuI TTCGAA 1 cut(s) 30
Sse9I AATT 1 cut(s) 83
SsiI CCGC 1 cut(s) 287
TaaI ACNGT 1 cut(s) 152
TaiI ACGT 1 cut(s) 42
TaqI TCGA 1 cut(s) 30
TasI AATT 1 cut(s) 83
TauI GCSGC 1 cut(s) 290
TfiI GAWTC 1 cut(s) 27
Tru1I TTAA 1 cut(s) 90
Tru9I TTAA 1 cut(s) 90
TscAI CASTG 2 cut(s) 155, 218
TseFI GTSAC 3 cut(s) 199, 218, 226
Tsp45I GTSAC 3 cut(s) 199, 218, 226
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 2 cut(s) 155, 218
Tth111I GACNNNGTC 1 cut(s) 224
XceI RCATGY 1 cut(s) 138
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.