pycom11g04710
HSP70 Family

Heat shock 70 kDa

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
N/A
Physical Location & Seq
Forward (+)
3625799 .. 3626494
696 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g04710.1

Sequence Viewer

Length: 474 bp
ATGGAAAAGTGCCCATGGGAACGCTATGGTCTCACAACTAACGTGTTGCTCTCCAGGAGGTTAAGACCAAGTTGGATTTTTGCTGAGAGACTGTACAAGAGGCAGAGAGGTACAAACCTGAAGGTGAGGAGGTTAAGAACAAGTTGGATGCCAAGAACTCGCTCGCTCGAGAACTACACCTACAACATGAGGAACACCCTGAAGGATGAGAAGGTTGCTGGGATATTGGACCCTGCAGACATTGATAAGGAGCACAAGTCCAATGTACCACTGTATCAAGGTATCACCGGTGAGAATGCATCTTTGAACCTTGCTGCCTTATTTGATTCAGAAGTAAATACAAATTTTGGGTTGTGTGGATCTTCCAATGCCAGTGGTCTTGAATTGAGGCAATCCGCAGGGCAACAATTGACAACTACAGTTGCAGATGATAAACAACCGCCGGAAGAAGCTACCTCGGGCCTTTACAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169
Pfam Domains
Protein Families
HSP70

Protein Analysis

158

Amino Acids

17.8

Weight (kDa)

9.17

Isoelectric Point (pI)

43.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 396, 440
AclWI GGATC 1 cut(s) 367
AcsI RAATTY 1 cut(s) 343
AcuI CTGAAG 2 cut(s) 140, 221
AfaI GTAC 3 cut(s) 95, 112, 267
AflIII ACRYGT 1 cut(s) 42
AgeI ACCGGT 1 cut(s) 287
AgsI TTSAA 2 cut(s) 307, 383
AjnI CCWGG 1 cut(s) 53
AluBI AGCT 2 cut(s) 452, 471
AluI AGCT 2 cut(s) 452, 471
Alw21I GWGCWC 1 cut(s) 255
Alw26I GTCTC 2 cut(s) 35, 82
AlwI GGATC 1 cut(s) 367
Ama87I CYCGRG 2 cut(s) 167, 457
AoxI GGCC 1 cut(s) 460
ApeKI GCWGC 1 cut(s) 314
ApoI RAATTY 1 cut(s) 343
AsiGI ACCGGT 1 cut(s) 287
AspS9I GGNCC 2 cut(s) 229, 460
AsuHPI GGTGA 3 cut(s) 136, 277, 302
AvaI CYCGRG 2 cut(s) 167, 457
AvaII GGWCC 1 cut(s) 229
BaeGI GKGCMC 1 cut(s) 14
BaeI ACNNNNGTAYC 2 cut(s) 257, 290
Bbv12I GWGCWC 1 cut(s) 255
BbvI GCAGC 1 cut(s) 301
BciT130I CCWGG 1 cut(s) 55
BcoDI GTCTC 2 cut(s) 35, 82
BfmI CTRYAG 2 cut(s) 234, 417
BisI GCNGC 1 cut(s) 315
BlsI GCNGC 1 cut(s) 316
Bme1390I CCNGG 1 cut(s) 55
Bme18I GGWCC 1 cut(s) 229
BmeT110I CYCGRG 2 cut(s) 167, 457
BmgT120I GGNCC 2 cut(s) 229, 460
BmiI GGNNCC 1 cut(s) 231
BmrFI CCNGG 1 cut(s) 55
BmsI GCATC 2 cut(s) 138, 308
BpmI CTGGAG 1 cut(s) 37
BsaI GGTCTC 1 cut(s) 35
BsaJI CCNNGG 2 cut(s) 14, 456
BsaWI WCCGGW 1 cut(s) 287
BsaXI ACNNNNNCTCC 2 cut(s) 242, 272
Bse118I RCCGGY 1 cut(s) 287
Bse1I ACTGG 1 cut(s) 372
BseBI CCWGG 1 cut(s) 55
BseDI CCNNGG 2 cut(s) 14, 456
BseGI GGATG 2 cut(s) 153, 211
BseMII CTCAG 1 cut(s) 75
BseNI ACTGG 1 cut(s) 372
BseRI GAGGAG 1 cut(s) 142
BseSI GKGCMC 1 cut(s) 14
BseXI GCAGC 1 cut(s) 301
BseYI CCCAGC 1 cut(s) 218
BshFI GGCC 1 cut(s) 462
BshTI ACCGGT 1 cut(s) 287
BsiHKAI GWGCWC 1 cut(s) 255
BsiHKCI CYCGRG 2 cut(s) 167, 457
BsiSI CCGG 2 cut(s) 288, 443
BsmAI GTCTC 2 cut(s) 35, 82
BsmI GAATGC 1 cut(s) 301
BsnI GGCC 1 cut(s) 462
Bso31I GGTCTC 1 cut(s) 35
BsoBI CYCGRG 2 cut(s) 167, 457
Bsp1286I GDGCHC 2 cut(s) 14, 255
Bsp1407I TGTACA 1 cut(s) 93
Bsp143I GATC 1 cut(s) 359
Bsp19I CCATGG 1 cut(s) 14
BspACI CCGC 2 cut(s) 396, 440
BspANI GGCC 1 cut(s) 462
BspCNI CTCAG 1 cut(s) 76
BspLI GGNNCC 1 cut(s) 231
BspMAI CTGCAG 1 cut(s) 238
BspPI GGATC 1 cut(s) 367
BspTNI GGTCTC 1 cut(s) 35
BsrFI RCCGGY 1 cut(s) 287
BsrGI TGTACA 1 cut(s) 93
BsrI ACTGG 1 cut(s) 372
BssAI RCCGGY 1 cut(s) 287
BssECI CCNNGG 2 cut(s) 14, 456
BssMI GATC 1 cut(s) 359
BssT1I CCWWGG 1 cut(s) 14
Bst2UI CCWGG 1 cut(s) 55
Bst4CI ACNGT 3 cut(s) 93, 273, 421
BstAUI TGTACA 1 cut(s) 93
BstC8I GCNNGC 1 cut(s) 164
BstDEI CTNAG 1 cut(s) 84
BstDSI CCRYGG 1 cut(s) 14
BstF5I GGATG 2 cut(s) 153, 211
BstKTI GATC 1 cut(s) 362
BstMAI GTCTC 2 cut(s) 35, 82
BstMBI GATC 1 cut(s) 359
BstMWI GCNNNNNNNGC 1 cut(s) 468
BstNI CCWGG 1 cut(s) 55
BstSCI CCNGG 1 cut(s) 53
BstSFI CTRYAG 2 cut(s) 234, 417
BstSLI GKGCMC 1 cut(s) 14
BstV1I GCAGC 1 cut(s) 301
BstX2I RGATCY 1 cut(s) 359
BstYI RGATCY 1 cut(s) 359
BsuRI GGCC 1 cut(s) 462
BtgI CCRYGG 1 cut(s) 14
BtsCI GGATG 2 cut(s) 153, 211
BtsIMutI CAGTG 2 cut(s) 269, 379
Cac8I GCNNGC 1 cut(s) 164
Cfr10I RCCGGY 1 cut(s) 287
Cfr13I GGNCC 2 cut(s) 229, 460
Csp6I GTAC 3 cut(s) 94, 111, 266
CspAI ACCGGT 1 cut(s) 287
CspCI CAANNNNNGTGG 2 cut(s) 355, 390
CviAII CATG 2 cut(s) 15, 187
CviJI RGCY 3 cut(s) 452, 462, 471
CviKI_1 RGCY 3 cut(s) 452, 462, 471
CviQI GTAC 3 cut(s) 94, 111, 266
DdeI CTNAG 1 cut(s) 84
DpnI GATC 1 cut(s) 361
DpnII GATC 1 cut(s) 359
Eco130I CCWWGG 1 cut(s) 14
Eco31I GGTCTC 1 cut(s) 35
Eco47I GGWCC 1 cut(s) 229
Eco57I CTGAAG 2 cut(s) 140, 221
Eco88I CYCGRG 2 cut(s) 167, 457
EcoRII CCWGG 1 cut(s) 53
EcoT14I CCWWGG 1 cut(s) 14
EcoT22I ATGCAT 1 cut(s) 301
ErhI CCWWGG 1 cut(s) 14
FaeI CATG 2 cut(s) 18, 190
FaiI YATR 3 cut(s) 16, 27, 188
FatI CATG 2 cut(s) 14, 186
Fnu4HI GCNGC 1 cut(s) 315
FokI GGATG 2 cut(s) 160, 218
Fsp4HI GCNGC 1 cut(s) 315
GluI GCNGC 1 cut(s) 315
GsaI CCCAGC 1 cut(s) 222
GsuI CTGGAG 1 cut(s) 37
HaeIII GGCC 1 cut(s) 462
HapII CCGG 2 cut(s) 288, 443
Hin1II CATG 2 cut(s) 18, 190
HinfI GANTC 1 cut(s) 326
HpaII CCGG 2 cut(s) 288, 443
HphI GGTGA 3 cut(s) 136, 277, 302
Hpy188I TCNGA 1 cut(s) 331
Hpy188III TCNNGA 2 cut(s) 169, 380
HpyAV CCTTC 3 cut(s) 115, 196, 205
HpyCH4III ACNGT 3 cut(s) 93, 273, 421
HpyCH4IV ACGT 1 cut(s) 42
HpyCH4V TGCA 3 cut(s) 236, 299, 425
HpyF10VI GCNNNNNNNGC 1 cut(s) 468
HpyF3I CTNAG 1 cut(s) 84
HpySE526I ACGT 1 cut(s) 42
Hsp92II CATG 2 cut(s) 18, 190
Kzo9I GATC 1 cut(s) 359
LmnI GCTCC 1 cut(s) 250
Lsp1109I GCAGC 1 cut(s) 301
LweI GCATC 2 cut(s) 138, 308
MaeII ACGT 1 cut(s) 42
MalI GATC 1 cut(s) 361
MboI GATC 1 cut(s) 359
MboII GAAGA 2 cut(s) 354, 458
MfeI CAATTG 1 cut(s) 407
MflI RGATCY 1 cut(s) 359
MhlI GDGCHC 2 cut(s) 14, 255
MluCI AATT 3 cut(s) 343, 383, 407
MmeI TCCRAC 2 cut(s) 53, 125
MnlI CCTC 8 cut(s) 51, 93, 101, 120, 123, 183, 381, 466
Mph1103I ATGCAT 1 cut(s) 301
MseI TTAA 2 cut(s) 62, 134
MspI CCGG 2 cut(s) 288, 443
MspR9I CCNGG 1 cut(s) 55
MunI CAATTG 1 cut(s) 407
Mva1269I GAATGC 1 cut(s) 301
MvaI CCWGG 1 cut(s) 55
MwoI GCNNNNNNNGC 1 cut(s) 468
NcoI CCATGG 1 cut(s) 14
NdeII GATC 1 cut(s) 359
NlaIII CATG 2 cut(s) 18, 190
NlaIV GGNNCC 1 cut(s) 231
NsiI ATGCAT 1 cut(s) 301
PaeR7I CTCGAG 1 cut(s) 167
PctI GAATGC 1 cut(s) 301
PfeI GAWTC 1 cut(s) 326
PfoI TCCNGGA 1 cut(s) 53
PinAI ACCGGT 1 cut(s) 287
PkrI GCNGC 1 cut(s) 316
Psp6I CCWGG 1 cut(s) 53
PspFI CCCAGC 1 cut(s) 218
PspGI CCWGG 1 cut(s) 53
PspN4I GGNNCC 1 cut(s) 231
PspPI GGNCC 2 cut(s) 229, 460
PsrI GAACNNNNNNTAC 2 cut(s) 164, 196
PstI CTGCAG 1 cut(s) 238
PsuI RGATCY 1 cut(s) 359
RsaI GTAC 3 cut(s) 95, 112, 267
RsaNI GTAC 3 cut(s) 94, 111, 266
SaqAI TTAA 2 cut(s) 62, 134
SatI GCNGC 1 cut(s) 315
Sau3AI GATC 1 cut(s) 359
Sau96I GGNCC 2 cut(s) 229, 460
ScrFI CCNGG 1 cut(s) 55
SduI GDGCHC 2 cut(s) 14, 255
SfaNI GCATC 2 cut(s) 138, 308
SfcI CTRYAG 2 cut(s) 234, 417
Sfr274I CTCGAG 1 cut(s) 167
SgrAI CRCCGGYG 1 cut(s) 287
SinI GGWCC 1 cut(s) 229
SlaI CTCGAG 1 cut(s) 167
SmlI CTYRAG 1 cut(s) 167
SmoI CTYRAG 1 cut(s) 167
Sse9I AATT 3 cut(s) 343, 383, 407
SsiI CCGC 2 cut(s) 396, 440
StyD4I CCNGG 1 cut(s) 53
StyI CCWWGG 1 cut(s) 14
TaaI ACNGT 3 cut(s) 93, 273, 421
TaiI ACGT 1 cut(s) 45
TaqI TCGA 1 cut(s) 168
TasI AATT 3 cut(s) 343, 383, 407
TatI WGTACW 1 cut(s) 93
TfiI GAWTC 1 cut(s) 326
Tru1I TTAA 2 cut(s) 62, 134
Tru9I TTAA 2 cut(s) 62, 134
TscAI CASTG 2 cut(s) 276, 379
TseI GCWGC 1 cut(s) 314
TspRI CASTG 2 cut(s) 276, 379
VpaK11BI GGWCC 1 cut(s) 229
XapI RAATTY 1 cut(s) 343
XhoI CTCGAG 1 cut(s) 167
Zsp2I ATGCAT 1 cut(s) 301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.