pycom11g07000

Acyl-coenzyme A thioesterase 13-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
N/A
Physical Location & Seq
Forward (+)
5325490 .. 5327798
2309 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 426 bp
ATGGATCCGAATCAACAAGGTAATAGTAATATGGAGGGGGCGAAGAGGTTTCTGGGGCTGACTCCGGTCGAGTCAGAGGCCGTGTCGCGACTCGCGGTTCCAGAATGGGCAGCCGGCGCGAGAAAGTGCTTCTACGACGCTTTTGCTGTCGCGGGAATCCGAGTCGACCGAGTCGAACCCGGACTCGTCGTCTGTTCTTTCAAGGTCCCTCCCCGCCTCACCGATAGAAGTGGAAAGTTGGCAAATGGTGCAATTGCAAACCTTGTCGATCTTGTTGGAATTTCTCTAGAATTTGGCGAGGGACTCGGTAGTGTTTCAACCGACATATCTATCTCGTATCTCTCTGCGGCGAAGATTGGTGTAAGCATGGCCTCCCCCTCAAATCCCTGTTTTCGTATGAAATTTCATTCAGTTCAGTATCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
4HBT

Protein Analysis

142

Amino Acids

14.98

Weight (kDa)

7.7

Isoelectric Point (pI)

22.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 165
AccII CGCG 4 cut(s) 88, 95, 119, 152
AciI CCGC 4 cut(s) 95, 152, 214, 347
AclWI GGATC 1 cut(s) 12
AcsI RAATTY 3 cut(s) 279, 290, 401
AgsI TTSAA 2 cut(s) 202, 318
AhdI GACNNNNNGTC 1 cut(s) 188
AlwI GGATC 1 cut(s) 12
AoxI GGCC 2 cut(s) 78, 369
ApeKI GCWGC 1 cut(s) 110
ApoI RAATTY 3 cut(s) 279, 290, 401
AspLEI GCGC 1 cut(s) 119
AspS9I GGNCC 1 cut(s) 205
AsuC2I CCSGG 1 cut(s) 180
AsuHPI GGTGA 1 cut(s) 211
AvaII GGWCC 1 cut(s) 205
BamHI GGATCC 1 cut(s) 4
BbvI GCAGC 1 cut(s) 122
BceAI ACGGC 1 cut(s) 65
BcgI CGANNNNNNTGC 2 cut(s) 125, 159
BcnI CCSGG 1 cut(s) 180
BfaI CTAG 1 cut(s) 287
BisI GCNGC 2 cut(s) 111, 348
BlsI GCNGC 2 cut(s) 112, 349
Bme1390I CCNGG 1 cut(s) 180
Bme18I GGWCC 1 cut(s) 205
BmeRI GACNNNNNGTC 1 cut(s) 188
BmgT120I GGNCC 1 cut(s) 205
BmiI GGNNCC 3 cut(s) 6, 99, 207
BmrFI CCNGG 1 cut(s) 180
BoxI GACNNNNGTC 1 cut(s) 65
BpuMI CCSGG 1 cut(s) 180
BsaBI GATNNNNATC 1 cut(s) 9
BsaWI WCCGGW 1 cut(s) 64
Bse118I RCCGGY 1 cut(s) 113
Bse8I GATNNNNATC 1 cut(s) 9
BseJI GATNNNNATC 1 cut(s) 9
BseXI GCAGC 1 cut(s) 122
Bsh1236I CGCG 4 cut(s) 88, 95, 119, 152
Bsh1285I CGRYCG 2 cut(s) 69, 169
BshFI GGCC 2 cut(s) 80, 371
BsiEI CGRYCG 2 cut(s) 69, 169
BsiSI CCGG 3 cut(s) 65, 114, 180
BslFI GGGAC 2 cut(s) 191, 315
BsmFI GGGAC 2 cut(s) 191, 315
BsnI GGCC 2 cut(s) 80, 371
Bsp143I GATC 2 cut(s) 4, 268
Bsp68I TCGCGA 1 cut(s) 88
BspACI CCGC 4 cut(s) 95, 152, 214, 347
BspANI GGCC 2 cut(s) 80, 371
BspFNI CGCG 4 cut(s) 88, 95, 119, 152
BspLI GGNNCC 3 cut(s) 6, 99, 207
BspPI GGATC 1 cut(s) 12
BsrFI RCCGGY 1 cut(s) 113
BssAI RCCGGY 1 cut(s) 113
BssMI GATC 2 cut(s) 4, 268
Bst6I CTCTTC 1 cut(s) 38
BstAPI GCANNNNNTGC 1 cut(s) 248
BstC8I GCNNGC 1 cut(s) 115
BstFNI CGCG 4 cut(s) 88, 95, 119, 152
BstHHI GCGC 1 cut(s) 119
BstKTI GATC 2 cut(s) 7, 271
BstMBI GATC 2 cut(s) 4, 268
BstMCI CGRYCG 2 cut(s) 69, 169
BstMWI GCNNNNNNNGC 2 cut(s) 116, 248
BstPAI GACNNNNGTC 1 cut(s) 65
BstSCI CCNGG 1 cut(s) 178
BstUI CGCG 4 cut(s) 88, 95, 119, 152
BstV1I GCAGC 1 cut(s) 122
BstX2I RGATCY 1 cut(s) 4
BstYI RGATCY 1 cut(s) 4
BsuRI GGCC 2 cut(s) 80, 371
BtuMI TCGCGA 1 cut(s) 88
Cac8I GCNNGC 1 cut(s) 115
CfoI GCGC 1 cut(s) 119
Cfr10I RCCGGY 1 cut(s) 113
Cfr13I GGNCC 1 cut(s) 205
CseI GACGC 1 cut(s) 146
CviAII CATG 1 cut(s) 367
CviJI RGCY 4 cut(s) 58, 80, 113, 371
CviKI_1 RGCY 4 cut(s) 58, 80, 113, 371
DpnI GATC 2 cut(s) 6, 270
DpnII GATC 2 cut(s) 4, 268
DriI GACNNNNNGTC 1 cut(s) 188
Eam1104I CTCTTC 1 cut(s) 38
Eam1105I GACNNNNNGTC 1 cut(s) 188
EarI CTCTTC 1 cut(s) 38
Eco47I GGWCC 1 cut(s) 205
EcoO109I RGGNCCY 1 cut(s) 205
FaeI CATG 1 cut(s) 370
FaiI YATR 4 cut(s) 32, 326, 368, 398
FaqI GGGAC 2 cut(s) 191, 315
FatI CATG 1 cut(s) 366
FauI CCCGC 2 cut(s) 145, 221
FblI GTMKAC 1 cut(s) 165
Fnu4HI GCNGC 2 cut(s) 111, 348
Fsp4HI GCNGC 2 cut(s) 111, 348
FspBI CTAG 1 cut(s) 287
GlaI GCGC 1 cut(s) 118
GluI GCNGC 2 cut(s) 111, 348
HaeIII GGCC 2 cut(s) 80, 371
HapII CCGG 3 cut(s) 65, 114, 180
HgaI GACGC 1 cut(s) 146
HhaI GCGC 1 cut(s) 119
Hin1II CATG 1 cut(s) 370
Hin6I GCGC 1 cut(s) 117
HinP1I GCGC 1 cut(s) 117
HincII GTYRAC 1 cut(s) 166
HindII GTYRAC 1 cut(s) 166
HinfI GANTC 9 cut(s) 10, 61, 71, 90, 156, 162, 171, 183, 303
HpaII CCGG 3 cut(s) 65, 114, 180
HphI GGTGA 1 cut(s) 211
Hpy166II GTNNAC 1 cut(s) 166
Hpy188I TCNGA 3 cut(s) 9, 76, 161
Hpy188III TCNNGA 3 cut(s) 87, 101, 287
Hpy8I GTNNAC 1 cut(s) 166
Hpy99I CGWCG 2 cut(s) 140, 191
HpyCH4V TGCA 2 cut(s) 251, 257
HpyF10VI GCNNNNNNNGC 2 cut(s) 116, 248
Hsp92II CATG 1 cut(s) 370
HspAI GCGC 1 cut(s) 117
KroI GCCGGC 1 cut(s) 113
KroNI GCCGGC 1 cut(s) 115
Kzo9I GATC 2 cut(s) 4, 268
LpnPI CCDG 6 cut(s) 38, 78, 114, 127, 193, 400
Lsp1109I GCAGC 1 cut(s) 122
MaeI CTAG 1 cut(s) 287
MalI GATC 2 cut(s) 6, 270
MboI GATC 2 cut(s) 4, 268
MboII GAAGA 2 cut(s) 55, 364
MfeI CAATTG 1 cut(s) 252
MflI RGATCY 1 cut(s) 4
MluCI AATT 4 cut(s) 252, 279, 290, 401
MlyI GAGTC 7 cut(s) 55, 80, 84, 171, 177, 180, 297
MmeI TCCRAC 1 cut(s) 256
MnlI CCTC 8 cut(s) 28, 39, 70, 219, 227, 292, 382, 388
MroNI GCCGGC 1 cut(s) 113
MseI TTAA 1 cut(s) 424
MspI CCGG 3 cut(s) 65, 114, 180
MspR9I CCNGG 1 cut(s) 180
MunI CAATTG 1 cut(s) 252
MvnI CGCG 4 cut(s) 88, 95, 119, 152
MwoI GCNNNNNNNGC 2 cut(s) 116, 248
NaeI GCCGGC 1 cut(s) 115
NciI CCSGG 1 cut(s) 180
NdeII GATC 2 cut(s) 4, 268
NgoMIV GCCGGC 1 cut(s) 113
NlaIII CATG 1 cut(s) 370
NlaIV GGNNCC 3 cut(s) 6, 99, 207
NruI TCGCGA 1 cut(s) 88
PcsI WCGNNNNNNNCGW 1 cut(s) 171
PdiI GCCGGC 1 cut(s) 115
PfeI GAWTC 2 cut(s) 10, 156
PflFI GACNNNGTC 1 cut(s) 170
PkrI GCNGC 2 cut(s) 112, 349
PleI GAGTC 7 cut(s) 55, 79, 84, 170, 177, 179, 297
PpsI GAGTC 7 cut(s) 55, 79, 84, 170, 177, 179, 297
PpuMI RGGWCCY 1 cut(s) 205
PshAI GACNNNNGTC 1 cut(s) 65
Psp5II RGGWCCY 1 cut(s) 205
PspN4I GGNNCC 3 cut(s) 6, 99, 207
PspPI GGNCC 1 cut(s) 205
PspPPI RGGWCCY 1 cut(s) 205
PsuI RGATCY 1 cut(s) 4
PsyI GACNNNGTC 1 cut(s) 170
RruI TCGCGA 1 cut(s) 88
SalI GTCGAC 1 cut(s) 164
SaqAI TTAA 1 cut(s) 424
SatI GCNGC 2 cut(s) 111, 348
Sau3AI GATC 2 cut(s) 4, 268
Sau96I GGNCC 1 cut(s) 205
SchI GAGTC 7 cut(s) 55, 80, 84, 171, 177, 180, 297
ScrFI CCNGG 1 cut(s) 180
SetI ASST 4 cut(s) 22, 50, 207, 264
SinI GGWCC 1 cut(s) 205
Sse9I AATT 4 cut(s) 252, 279, 290, 401
SsiI CCGC 4 cut(s) 95, 152, 214, 347
SspMI CTAG 1 cut(s) 287
StyD4I CCNGG 1 cut(s) 178
TaqI TCGA 4 cut(s) 69, 165, 174, 267
TaqII GACCGA 1 cut(s) 183
TasI AATT 4 cut(s) 252, 279, 290, 401
TauI GCSGC 1 cut(s) 350
TfiI GAWTC 2 cut(s) 10, 156
Tru1I TTAA 1 cut(s) 424
Tru9I TTAA 1 cut(s) 424
TseI GCWGC 1 cut(s) 110
TspDTI ATGAA 2 cut(s) 395, 413
Tth111I GACNNNGTC 1 cut(s) 170
VpaK11BI GGWCC 1 cut(s) 205
XapI RAATTY 3 cut(s) 279, 290, 401
XbaI TCTAGA 1 cut(s) 286
XmiI GTMKAC 1 cut(s) 165
XspI CTAG 1 cut(s) 287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.