pycom11g11680

Protein of unknown function, DUF547

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
N/A
Physical Location & Seq
Reverse (-)
10449580 .. 10452240
2661 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 351 bp
ATGATGAACCTCATCATCGTCATCATCAGCCTGAAAGCTCTCTCTCATCACCATCTTCACTCAAAGTTCTTTCCATTCATCAAATCAAACGTCAACATTGAATACATCCAAAACCTCACCAAAAATACTGCCAATAATATCTTACCCTCTTGGCTTTACGTTGCCTTTTGTAGGCGCTGGAGTTGGCTGAAGTTAAAGGCTTTGTTCATGGCGAGCCCCAGCGACTTGTCCGTTCGCACTCCGTCGGAGATTAGAAAAAAGAAACTTTCTGGGCAACGATGGAGAGAGCTTGGAAGAGAGATACGTTTCTTTGCTTCAAAGAATGCTGAATCAAGAAGAGAAAGTACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

117

Amino Acids

13.69

Weight (kDa)

10.81

Isoelectric Point (pI)

63.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 209
AfaI GTAC 1 cut(s) 346
AfiI CCNNNNNNNGG 1 cut(s) 171
AgsI TTSAA 2 cut(s) 101, 318
AluBI AGCT 2 cut(s) 38, 289
AluI AGCT 2 cut(s) 38, 289
ArsI GACNNNNNNTTYG 2 cut(s) 75, 107
AspLEI GCGC 1 cut(s) 177
AsuHPI GGTGA 2 cut(s) 41, 109
BanII GRGCYC 1 cut(s) 218
BarI GAAGNNNNNNTAC 1 cut(s) 328
BccI CCATC 2 cut(s) 60, 273
BfoI RGCGCY 1 cut(s) 178
BpmI CTGGAG 1 cut(s) 199
Bsc4I CCNNNNNNNGG 1 cut(s) 171
BseGI GGATG 1 cut(s) 105
BseLI CCNNNNNNNGG 1 cut(s) 171
BseYI CCCAGC 1 cut(s) 218
BslI CCNNNNNNNGG 1 cut(s) 171
BsmI GAATGC 1 cut(s) 328
Bsp1286I GDGCHC 1 cut(s) 218
Bst6I CTCTTC 2 cut(s) 289, 331
BstC8I GCNNGC 1 cut(s) 214
BstENI CCTNNNNNAGG 1 cut(s) 169
BstF5I GGATG 1 cut(s) 105
BstH2I RGCGCY 1 cut(s) 178
BstHHI GCGC 1 cut(s) 177
BtsCI GGATG 1 cut(s) 105
Cac8I GCNNGC 1 cut(s) 214
CfoI GCGC 1 cut(s) 177
Csp6I GTAC 1 cut(s) 345
CviAII CATG 2 cut(s) 208, 348
CviJI RGCY 7 cut(s) 30, 38, 154, 187, 200, 216, 289
CviKI_1 RGCY 7 cut(s) 30, 38, 154, 187, 200, 216, 289
CviQI GTAC 1 cut(s) 345
Eam1104I CTCTTC 2 cut(s) 289, 331
EarI CTCTTC 2 cut(s) 289, 331
Eco24I GRGCYC 1 cut(s) 218
Eco57I CTGAAG 1 cut(s) 209
EcoNI CCTNNNNNAGG 1 cut(s) 169
EcoT38I GRGCYC 1 cut(s) 218
FaeI CATG 2 cut(s) 211, 351
FaiI YATR 2 cut(s) 209, 349
FatI CATG 2 cut(s) 207, 347
FokI GGATG 1 cut(s) 92
FriOI GRGCYC 1 cut(s) 218
GlaI GCGC 1 cut(s) 176
GsaI CCCAGC 1 cut(s) 222
GsuI CTGGAG 1 cut(s) 199
HaeII RGCGCY 1 cut(s) 178
HhaI GCGC 1 cut(s) 177
Hin1II CATG 2 cut(s) 211, 351
Hin6I GCGC 1 cut(s) 175
HinP1I GCGC 1 cut(s) 175
HincII GTYRAC 1 cut(s) 94
HindII GTYRAC 1 cut(s) 94
HinfI GANTC 1 cut(s) 329
HphI GGTGA 2 cut(s) 41, 109
Hpy166II GTNNAC 1 cut(s) 94
Hpy188I TCNGA 1 cut(s) 247
Hpy188III TCNNGA 1 cut(s) 333
Hpy8I GTNNAC 1 cut(s) 94
Hpy99I CGWCG 1 cut(s) 247
HpyCH4IV ACGT 3 cut(s) 90, 159, 304
HpySE526I ACGT 3 cut(s) 90, 159, 304
Hsp92II CATG 2 cut(s) 211, 351
HspAI GCGC 1 cut(s) 175
LpnPI CCDG 4 cut(s) 44, 163, 232, 255
MaeII ACGT 3 cut(s) 90, 159, 304
MboII GAAGA 3 cut(s) 47, 306, 348
MhlI GDGCHC 1 cut(s) 218
MmeI TCCRAC 1 cut(s) 225
MnlI CCTC 3 cut(s) 20, 125, 157
MseI TTAA 1 cut(s) 194
Mva1269I GAATGC 1 cut(s) 328
NlaIII CATG 2 cut(s) 211, 351
PctI GAATGC 1 cut(s) 328
PfeI GAWTC 1 cut(s) 329
PspFI CCCAGC 1 cut(s) 218
RsaI GTAC 1 cut(s) 346
RsaNI GTAC 1 cut(s) 345
SaqAI TTAA 1 cut(s) 194
SduI GDGCHC 1 cut(s) 218
SetI ASST 7 cut(s) 12, 40, 93, 117, 162, 291, 307
TaiI ACGT 3 cut(s) 93, 162, 307
TatI WGTACW 1 cut(s) 344
TfiI GAWTC 1 cut(s) 329
Tru1I TTAA 1 cut(s) 194
Tru9I TTAA 1 cut(s) 194
TspDTI ATGAA 3 cut(s) 20, 67, 196
TspGWI ACGGA 2 cut(s) 220, 231
XagI CCTNNNNNAGG 1 cut(s) 169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.