pycom11g11700

ABC transporter G family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
N/A
Physical Location & Seq
Reverse (-)
10463167 .. 10465328
2162 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1011 bp
ATGTCCTCTCTCCCTTCCTTTTCCCTCGCCAGCTCTTTCTCCCAGCCAAACAAGCAAAACCCCCAAAGCTCCTCAGGTTTTCTGTTTCCCCATGGCTTCCCACTATCCTCCACCACCCCTCTCACATTCTTCCCCCACCACTCCTCCTTCTCACCCTCTAACCACACTTCCTTATCCCCACCGTACATTTCCCGAATCGCCACCTTCAACCGATCGCAACCGCCAATTGGACCGCTACATTGCAATCCGTCAGTCGATTTCTCCGTTTGGAGGGTGAAGGCGGCCGGTATGAGCAGAGAGCATCTCCAAAGTCTCTCTGTTAGGGTTTTCTCTTTGCTCGTTTTCTCCAGCTTCTTCTTCAGCTCGCCTCTGCCCCGAGCGGCGGGGCAGGATTCCGAAGGCCGCGATGGTGGCGGCAGAGTGTATGACCTCGCCACCGAGCTCGTCTTGAGCCGCTACTCCAATCTCACCCATGTCTTCCGTGATGAACTCCTCAAAAAATTTGGCTTCTGCATCATCGACGTAGACGAGGATTTGAATGGGGCTTTCAATTTCTCACAAGATTCAAGCTTCATTACCAACTGTGCTAAAAAAATGGCAGGTGGAATGATTGGGGAGGTTTTGGGTCGATTGTGCACAGCCGCAGAAATGCGGATCTACGCTGGTGGTATATTGCAAACCAAGAAGACCACATACTTAAAACCGAACAAGAACTGTAATCTGTCAGCATGGATTTCTGGATGTGAGCCTGGGTGGGCTTGTGCTTCTGCTGAGCAAGTTGAACTGAAAAATCGAACTTATGTGCCTGCTAGAACTGTCGAGTGTCAACCTTGTTGTGAGGGTTTCTTCTGCCCGCAAGGTCTTACTTGCATGCTCCCTTGCCCAAAGGGTGCTTACTGCCCACTTGGAAAACTCAATAACGGATCTGGGATATGTGAGCCAAATATTCCACAGATACAGCTATCAGCTACCTCCTGGGAAGCAAAACCATACTTGTGGAGGAGCAGCTAA

Protein Analysis

337

Amino Acids

36.76

Weight (kDa)

8.59

Isoelectric Point (pI)

56.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 590
Acc36I ACCTGC 1 cut(s) 590
AccBSI CCGCTC 1 cut(s) 380
AccI GTMKAC 1 cut(s) 525
AccII CGCG 1 cut(s) 405
AclWI GGATC 2 cut(s) 662, 931
AcoI YGGCCR 1 cut(s) 282
AcsI RAATTY 1 cut(s) 500
AcuI CTGAAG 1 cut(s) 343
AfaI GTAC 1 cut(s) 185
AfiI CCNNNNNNNGG 3 cut(s) 227, 270, 382
AgsI TTSAA 5 cut(s) 208, 538, 550, 567, 782
AjnI CCWGG 2 cut(s) 748, 974
AluBI AGCT 9 cut(s) 33, 69, 351, 363, 442, 570, 961, 968, 1008
AluI AGCT 9 cut(s) 33, 69, 351, 363, 442, 570, 961, 968, 1008
Alw21I GWGCWC 2 cut(s) 444, 638
Alw26I GTCTC 1 cut(s) 317
Alw44I GTGCAC 1 cut(s) 634
AlwI GGATC 2 cut(s) 662, 931
Ama87I CYCGRG 1 cut(s) 375
AoxI GGCC 2 cut(s) 282, 400
ApaLI GTGCAC 1 cut(s) 634
ApeKI GCWGC 1 cut(s) 1005
ApoI RAATTY 1 cut(s) 500
AspS9I GGNCC 1 cut(s) 230
AsuHPI GGTGA 3 cut(s) 144, 286, 460
AvaI CYCGRG 1 cut(s) 375
AvaII GGWCC 1 cut(s) 230
AxyI CCTNAGG 1 cut(s) 73
BaeGI GKGCMC 1 cut(s) 638
BanII GRGCYC 1 cut(s) 444
BarI GAAGNNNNNNTAC 2 cut(s) 677, 709
BbsI GAAGAC 2 cut(s) 469, 692
Bbv12I GWGCWC 2 cut(s) 444, 638
BccI CCATC 1 cut(s) 401
BciT130I CCWGG 2 cut(s) 750, 976
BcoDI GTCTC 1 cut(s) 317
BfaI CTAG 1 cut(s) 810
BfuAI ACCTGC 1 cut(s) 590
BisI GCNGC 7 cut(s) 282, 381, 403, 415, 454, 642, 1006
BlpI GCTNAGC 1 cut(s) 771
BlsI GCNGC 7 cut(s) 283, 382, 404, 416, 455, 643, 1007
Bme1390I CCNGG 2 cut(s) 750, 976
Bme18I GGWCC 1 cut(s) 230
BmeT110I CYCGRG 1 cut(s) 375
BmgT120I GGNCC 1 cut(s) 230
BmrFI CCNGG 2 cut(s) 750, 976
BmsI GCATC 2 cut(s) 310, 522
BpiI GAAGAC 2 cut(s) 469, 692
BplI GAGNNNNNCTC 2 cut(s) 288, 320
BpmI CTGGAG 1 cut(s) 331
Bpu1102I GCTNAGC 1 cut(s) 771
BpuEI CTTGAG 1 cut(s) 469
BsaJI CCNNGG 3 cut(s) 91, 749, 975
BsaXI ACNNNNNCTCC 2 cut(s) 128, 158
Bsc4I CCNNNNNNNGG 3 cut(s) 227, 270, 382
Bse118I RCCGGY 1 cut(s) 284
Bse21I CCTNAGG 1 cut(s) 73
Bse3DI GCAATG 1 cut(s) 238
BseBI CCWGG 2 cut(s) 750, 976
BseDI CCNNGG 3 cut(s) 91, 749, 975
BseGI GGATG 1 cut(s) 746
BseLI CCNNNNNNNGG 3 cut(s) 227, 270, 382
BseMI GCAATG 1 cut(s) 238
BseMII CTCAG 2 cut(s) 87, 762
BseRI GAGGAG 3 cut(s) 61, 133, 482
BseSI GKGCMC 1 cut(s) 638
BseX3I CGGCCG 1 cut(s) 282
BseYI CCCAGC 1 cut(s) 42
Bsh1236I CGCG 1 cut(s) 405
Bsh1285I CGRYCG 2 cut(s) 215, 285
BshFI GGCC 2 cut(s) 284, 402
BsiEI CGRYCG 2 cut(s) 215, 285
BsiHKAI GWGCWC 2 cut(s) 444, 638
BsiHKCI CYCGRG 1 cut(s) 375
BsiSI CCGG 1 cut(s) 285
BslI CCNNNNNNNGG 3 cut(s) 227, 270, 382
BsmAI GTCTC 1 cut(s) 317
BsnI GGCC 2 cut(s) 284, 402
BsoBI CYCGRG 1 cut(s) 375
Bsp1286I GDGCHC 2 cut(s) 444, 638
Bsp143I GATC 3 cut(s) 212, 654, 923
Bsp1720I GCTNAGC 1 cut(s) 771
Bsp19I CCATGG 1 cut(s) 91
BspANI GGCC 2 cut(s) 284, 402
BspCNI CTCAG 2 cut(s) 86, 763
BspFNI CGCG 1 cut(s) 405
BspMI ACCTGC 1 cut(s) 590
BspPI GGATC 2 cut(s) 662, 931
BsrBI CCGCTC 1 cut(s) 380
BsrDI GCAATG 1 cut(s) 238
BsrFI RCCGGY 1 cut(s) 284
BssAI RCCGGY 1 cut(s) 284
BssECI CCNNGG 3 cut(s) 91, 749, 975
BssMI GATC 3 cut(s) 212, 654, 923
BssT1I CCWWGG 1 cut(s) 91
Bst2UI CCWGG 2 cut(s) 750, 976
Bst4CI ACNGT 4 cut(s) 183, 584, 716, 817
BstC8I GCNNGC 5 cut(s) 31, 365, 807, 854, 872
BstDEI CTNAG 2 cut(s) 73, 771
BstDSI CCRYGG 1 cut(s) 91
BstF5I GGATG 1 cut(s) 746
BstFNI CGCG 1 cut(s) 405
BstKTI GATC 3 cut(s) 215, 657, 926
BstMAI GTCTC 1 cut(s) 317
BstMBI GATC 3 cut(s) 212, 654, 923
BstMCI CGRYCG 2 cut(s) 215, 285
BstMWI GCNNNNNNNGC 2 cut(s) 52, 411
BstNI CCWGG 2 cut(s) 750, 976
BstNSI RCATGY 1 cut(s) 874
BstSCI CCNGG 2 cut(s) 748, 974
BstSLI GKGCMC 1 cut(s) 638
BstUI CGCG 1 cut(s) 405
BstV2I GAAGAC 2 cut(s) 469, 692
BstX2I RGATCY 2 cut(s) 654, 923
BstXI CCANNNNNNTGG 1 cut(s) 996
BstYI RGATCY 2 cut(s) 654, 923
BstZI CGGCCG 1 cut(s) 282
Bsu36I CCTNAGG 1 cut(s) 73
BsuRI GGCC 2 cut(s) 284, 402
BtgI CCRYGG 1 cut(s) 91
BtgZI GCGATG 1 cut(s) 420
BtsCI GGATG 1 cut(s) 746
BveI ACCTGC 1 cut(s) 590
Cac8I GCNNGC 5 cut(s) 31, 365, 807, 854, 872
Cfr10I RCCGGY 1 cut(s) 284
Cfr13I GGNCC 1 cut(s) 230
Csp6I GTAC 1 cut(s) 184
CviAII CATG 4 cut(s) 92, 473, 729, 871
CviQI GTAC 1 cut(s) 184
DdeI CTNAG 2 cut(s) 73, 771
DpnI GATC 3 cut(s) 214, 656, 925
DpnII GATC 3 cut(s) 212, 654, 923
EaeI YGGCCR 1 cut(s) 282
EagI CGGCCG 1 cut(s) 282
Ecl136II GAGCTC 1 cut(s) 442
EclXI CGGCCG 1 cut(s) 282
Eco130I CCWWGG 1 cut(s) 91
Eco24I GRGCYC 1 cut(s) 444
Eco47I GGWCC 1 cut(s) 230
Eco52I CGGCCG 1 cut(s) 282
Eco53kI GAGCTC 1 cut(s) 442
Eco57I CTGAAG 1 cut(s) 343
Eco81I CCTNAGG 1 cut(s) 73
Eco88I CYCGRG 1 cut(s) 375
EcoICRI GAGCTC 1 cut(s) 442
EcoRII CCWGG 2 cut(s) 748, 974
EcoT14I CCWWGG 1 cut(s) 91
EcoT38I GRGCYC 1 cut(s) 444
ErhI CCWWGG 1 cut(s) 91
FaeI CATG 4 cut(s) 95, 476, 732, 874
FatI CATG 4 cut(s) 91, 472, 728, 870
FauI CCCGC 2 cut(s) 376, 861
FblI GTMKAC 1 cut(s) 525
Fnu4HI GCNGC 7 cut(s) 282, 381, 403, 415, 454, 642, 1006
FokI GGATG 1 cut(s) 753
FriOI GRGCYC 1 cut(s) 444
Fsp4HI GCNGC 7 cut(s) 282, 381, 403, 415, 454, 642, 1006
FspBI CTAG 1 cut(s) 810
GluI GCNGC 7 cut(s) 282, 381, 403, 415, 454, 642, 1006
GsaI CCCAGC 1 cut(s) 46
GsuI CTGGAG 1 cut(s) 331
HaeIII GGCC 2 cut(s) 284, 402
HapII CCGG 1 cut(s) 285
Hin1II CATG 4 cut(s) 95, 476, 732, 874
HincII GTYRAC 1 cut(s) 827
HindII GTYRAC 1 cut(s) 827
HindIII AAGCTT 1 cut(s) 568
HinfI GANTC 3 cut(s) 195, 392, 563
HpaII CCGG 1 cut(s) 285
HphI GGTGA 3 cut(s) 144, 286, 460
Hpy166II GTNNAC 3 cut(s) 526, 636, 827
Hpy188I TCNGA 1 cut(s) 397
Hpy188III TCNNGA 3 cut(s) 192, 448, 738
Hpy8I GTNNAC 3 cut(s) 526, 636, 827
Hpy99I CGWCG 1 cut(s) 524
HpyAV CCTTC 5 cut(s) 24, 157, 214, 271, 392
HpyCH4III ACNGT 4 cut(s) 183, 584, 716, 817
HpyCH4IV ACGT 1 cut(s) 522
HpyCH4V TGCA 5 cut(s) 243, 513, 636, 676, 870
HpyF10VI GCNNNNNNNGC 2 cut(s) 52, 411
HpyF3I CTNAG 2 cut(s) 73, 771
HpySE526I ACGT 1 cut(s) 522
Hsp92II CATG 4 cut(s) 95, 476, 732, 874
Kzo9I GATC 3 cut(s) 212, 654, 923
LmnI GCTCC 3 cut(s) 74, 879, 1002
LweI GCATC 2 cut(s) 310, 522
MaeI CTAG 1 cut(s) 810
MaeII ACGT 1 cut(s) 522
MalI GATC 3 cut(s) 214, 656, 925
MbiI CCGCTC 1 cut(s) 380
MboI GATC 3 cut(s) 212, 654, 923
MboII GAAGA 6 cut(s) 121, 346, 349, 469, 697, 838
MfeI CAATTG 1 cut(s) 225
MflI RGATCY 2 cut(s) 654, 923
MhlI GDGCHC 2 cut(s) 444, 638
MluCI AATT 3 cut(s) 225, 500, 550
MseI TTAA 1 cut(s) 698
MslI CAYNNNNRTG 1 cut(s) 994
MspI CCGG 1 cut(s) 285
MspR9I CCNGG 2 cut(s) 750, 976
MunI CAATTG 1 cut(s) 225
MvaI CCWGG 2 cut(s) 750, 976
MvnI CGCG 1 cut(s) 405
MwoI GCNNNNNNNGC 2 cut(s) 52, 411
NcoI CCATGG 1 cut(s) 91
NdeII GATC 3 cut(s) 212, 654, 923
NlaIII CATG 4 cut(s) 95, 476, 732, 874
NspI RCATGY 1 cut(s) 874
PaeI GCATGC 1 cut(s) 874
PaqCI CACCTGC 1 cut(s) 590
PcsI WCGNNNNNNNCGW 2 cut(s) 261, 525
PfeI GAWTC 3 cut(s) 195, 392, 563
PkrI GCNGC 7 cut(s) 283, 382, 404, 416, 455, 643, 1007
Ple19I CGATCG 1 cut(s) 215
Psp124BI GAGCTC 1 cut(s) 444
Psp6I CCWGG 2 cut(s) 748, 974
PspFI CCCAGC 1 cut(s) 42
PspGI CCWGG 2 cut(s) 748, 974
PspPI GGNCC 1 cut(s) 230
PsuI RGATCY 2 cut(s) 654, 923
PvuI CGATCG 1 cut(s) 215
RsaI GTAC 1 cut(s) 185
RsaNI GTAC 1 cut(s) 184
RseI CAYNNNNRTG 1 cut(s) 994
SacI GAGCTC 1 cut(s) 444
SaqAI TTAA 1 cut(s) 698
SatI GCNGC 7 cut(s) 282, 381, 403, 415, 454, 642, 1006
Sau3AI GATC 3 cut(s) 212, 654, 923
Sau96I GGNCC 1 cut(s) 230
ScrFI CCNGG 2 cut(s) 750, 976
SduI GDGCHC 2 cut(s) 444, 638
SfaNI GCATC 2 cut(s) 310, 522
SinI GGWCC 1 cut(s) 230
SmiMI CAYNNNNRTG 1 cut(s) 994
SmlI CTYRAG 1 cut(s) 448
SmoI CTYRAG 1 cut(s) 448
SphI GCATGC 1 cut(s) 874
Sse9I AATT 3 cut(s) 225, 500, 550
SspI AATATT 1 cut(s) 946
SspMI CTAG 1 cut(s) 810
SstI GAGCTC 1 cut(s) 444
StyD4I CCNGG 2 cut(s) 748, 974
StyI CCWWGG 1 cut(s) 91
TaaI ACNGT 4 cut(s) 183, 584, 716, 817
TaiI ACGT 1 cut(s) 525
TaqI TCGA 5 cut(s) 255, 519, 628, 793, 819
TasI AATT 3 cut(s) 225, 500, 550
TauI GCSGC 6 cut(s) 284, 383, 405, 417, 456, 644
TfiI GAWTC 3 cut(s) 195, 392, 563
Tru1I TTAA 1 cut(s) 698
Tru9I TTAA 1 cut(s) 698
TseI GCWGC 1 cut(s) 1005
TspDTI ATGAA 2 cut(s) 501, 562
TspGWI ACGGA 4 cut(s) 237, 253, 470, 936
VneI GTGCAC 1 cut(s) 634
VpaK11BI GGWCC 1 cut(s) 230
XapI RAATTY 1 cut(s) 500
XceI RCATGY 1 cut(s) 874
XmiI GTMKAC 1 cut(s) 525
XspI CTAG 1 cut(s) 810
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.