pycom11g12740

MORN repeat

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
N/A
Physical Location & Seq
Reverse (-)
11687662 .. 11688520
859 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 300 bp
ATGTCCCGTTACCGGAAGCCTTACCCGGCTATACCGGATGACCACCATGACATTTCCAATCCCAAGGCTGTGATTGAGGAAATGGATAGGATTGAGGAGTTTCTCAAATGGGTTAGCTATGTTTTCGAAGATGGAAGCACGTATGAGGGCACTGTGTGGGATGACTTGGCTCATGGGAAAGGAGTCTACGTTGCCGACCAGGGACTTGTCAGGGTGCGGTGGACAAAGCTTGTATCAAAAAGATTTCATGCAGGAGATATAGTCTGCTTCATCACTATGGTTCTTTTTCGTGAGGTATGA

Protein Analysis

100

Amino Acids

11.58

Weight (kDa)

5.74

Isoelectric Point (pI)

28.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 186
AciI CCGC 1 cut(s) 217
AdeI CACNNNGTG 1 cut(s) 156
AfiI CCNNNNNNNGG 1 cut(s) 12
AjnI CCWGG 1 cut(s) 198
AluBI AGCT 2 cut(s) 117, 229
AluI AGCT 2 cut(s) 117, 229
AsuC2I CCSGG 1 cut(s) 26
AsuII TTCGAA 1 cut(s) 126
BaeGI GKGCMC 1 cut(s) 152
BccI CCATC 1 cut(s) 125
BciT130I CCWGG 1 cut(s) 200
BcnI CCSGG 1 cut(s) 26
Bme1390I CCNGG 2 cut(s) 26, 200
BmrFI CCNGG 2 cut(s) 26, 200
Bpu14I TTCGAA 1 cut(s) 126
BpuMI CCSGG 1 cut(s) 26
BsaAI YACGTR 1 cut(s) 141
BsaJI CCNNGG 2 cut(s) 63, 199
BsaWI WCCGGW 2 cut(s) 12, 34
BsaXI ACNNNNNCTCC 4 cut(s) 174, 204, 246, 276
Bsc4I CCNNNNNNNGG 1 cut(s) 12
BseBI CCWGG 1 cut(s) 200
BseDI CCNNGG 2 cut(s) 63, 199
BseGI GGATG 2 cut(s) 43, 166
BseLI CCNNNNNNNGG 1 cut(s) 12
BseRI GAGGAG 1 cut(s) 110
BseSI GKGCMC 1 cut(s) 152
BsiSI CCGG 3 cut(s) 13, 26, 35
BslFI GGGAC 1 cut(s) 216
BslI CCNNNNNNNGG 1 cut(s) 12
BsmFI GGGAC 1 cut(s) 216
Bsp119I TTCGAA 1 cut(s) 126
Bsp1286I GDGCHC 1 cut(s) 152
BspACI CCGC 1 cut(s) 217
BspT104I TTCGAA 1 cut(s) 126
BssECI CCNNGG 2 cut(s) 63, 199
BssT1I CCWWGG 1 cut(s) 63
Bst2UI CCWGG 1 cut(s) 200
Bst4CI ACNGT 1 cut(s) 154
BstBAI YACGTR 1 cut(s) 141
BstBI TTCGAA 1 cut(s) 126
BstF5I GGATG 2 cut(s) 43, 166
BstNI CCWGG 1 cut(s) 200
BstSCI CCNGG 2 cut(s) 24, 198
BstSLI GKGCMC 1 cut(s) 152
BtsCI GGATG 2 cut(s) 43, 166
BtsIMutI CAGTG 1 cut(s) 150
CviAII CATG 3 cut(s) 47, 173, 248
CviJI RGCY 6 cut(s) 19, 29, 68, 117, 170, 229
CviKI_1 RGCY 6 cut(s) 19, 29, 68, 117, 170, 229
DraIII CACNNNGTG 1 cut(s) 156
Eco130I CCWWGG 1 cut(s) 63
EcoRII CCWGG 1 cut(s) 198
EcoT14I CCWWGG 1 cut(s) 63
ErhI CCWWGG 1 cut(s) 63
FaeI CATG 3 cut(s) 50, 176, 251
FaiI YATR 9 cut(s) 32, 48, 120, 144, 174, 249, 260, 278, 298
FaqI GGGAC 1 cut(s) 216
FatI CATG 3 cut(s) 46, 172, 247
FblI GTMKAC 1 cut(s) 186
FokI GGATG 2 cut(s) 50, 173
HapII CCGG 3 cut(s) 13, 26, 35
Hin1II CATG 3 cut(s) 50, 176, 251
HindIII AAGCTT 1 cut(s) 227
HinfI GANTC 1 cut(s) 183
HpaII CCGG 3 cut(s) 13, 26, 35
Hpy166II GTNNAC 2 cut(s) 187, 222
Hpy188III TCNNGA 1 cut(s) 290
Hpy8I GTNNAC 2 cut(s) 187, 222
HpyCH4III ACNGT 1 cut(s) 154
HpyCH4IV ACGT 2 cut(s) 140, 189
HpyCH4V TGCA 1 cut(s) 251
HpySE526I ACGT 2 cut(s) 140, 189
Hsp92II CATG 3 cut(s) 50, 176, 251
LpnPI CCDG 7 cut(s) 26, 39, 48, 185, 196, 212, 237
MaeII ACGT 2 cut(s) 140, 189
MaeIII GTNAC 1 cut(s) 8
MboII GAAGA 1 cut(s) 140
MhlI GDGCHC 1 cut(s) 152
MlyI GAGTC 1 cut(s) 192
MnlI CCTC 4 cut(s) 70, 88, 139, 286
MslI CAYNNNNRTG 1 cut(s) 275
MspI CCGG 3 cut(s) 13, 26, 35
MspR9I CCNGG 2 cut(s) 26, 200
MvaI CCWGG 1 cut(s) 200
NciI CCSGG 1 cut(s) 26
NlaIII CATG 3 cut(s) 50, 176, 251
NspV TTCGAA 1 cut(s) 126
PleI GAGTC 1 cut(s) 191
PpsI GAGTC 1 cut(s) 191
Ppu21I YACGTR 1 cut(s) 141
Psp6I CCWGG 1 cut(s) 198
PspGI CCWGG 1 cut(s) 198
RseI CAYNNNNRTG 1 cut(s) 275
SchI GAGTC 1 cut(s) 192
ScrFI CCNGG 2 cut(s) 26, 200
SduI GDGCHC 1 cut(s) 152
SetI ASST 5 cut(s) 119, 143, 192, 231, 297
SfuI TTCGAA 1 cut(s) 126
SmiMI CAYNNNNRTG 1 cut(s) 275
SsiI CCGC 1 cut(s) 217
StyD4I CCNGG 2 cut(s) 24, 198
StyI CCWWGG 1 cut(s) 63
TaaI ACNGT 1 cut(s) 154
TaiI ACGT 2 cut(s) 143, 192
TaqI TCGA 1 cut(s) 126
TscAI CASTG 1 cut(s) 157
TspDTI ATGAA 2 cut(s) 236, 259
TspRI CASTG 1 cut(s) 157
XmiI GTMKAC 1 cut(s) 186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.