proteinaceous RNase P
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PPR_long | PF17177 | 10 - 77 | 3.3e-14 | Pentacotripeptide-repeat region of PRORP |
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No orthologs found for this gene in the current database.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 148 |
| AciI | CCGC | 3 cut(s) | 108, 129, 231 |
| AcoI | YGGCCR | 1 cut(s) | 293 |
| AflIII | ACRYGT | 1 cut(s) | 245 |
| AgsI | TTSAA | 2 cut(s) | 169, 192 |
| AleI | CACNNNNGTG | 1 cut(s) | 289 |
| AluBI | AGCT | 2 cut(s) | 43, 195 |
| AluI | AGCT | 2 cut(s) | 43, 195 |
| Alw26I | GTCTC | 1 cut(s) | 205 |
| AoxI | GGCC | 2 cut(s) | 275, 293 |
| AspLEI | GCGC | 1 cut(s) | 150 |
| AspS9I | GGNCC | 1 cut(s) | 18 |
| AsuHPI | GGTGA | 1 cut(s) | 276 |
| AvaII | GGWCC | 1 cut(s) | 18 |
| BalI | TGGCCA | 1 cut(s) | 295 |
| BccI | CCATC | 2 cut(s) | 262, 289 |
| BciVI | GTATCC | 1 cut(s) | 254 |
| BcoDI | GTCTC | 1 cut(s) | 205 |
| BfuI | GTATCC | 1 cut(s) | 254 |
| Bme18I | GGWCC | 1 cut(s) | 18 |
| BmgT120I | GGNCC | 1 cut(s) | 18 |
| BmiI | GGNNCC | 2 cut(s) | 19, 20 |
| BpmI | CTGGAG | 1 cut(s) | 33 |
| BpuEI | CTTGAG | 1 cut(s) | 200 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 89, 119 |
| BseMII | CTCAG | 1 cut(s) | 152 |
| BseRI | GAGGAG | 2 cut(s) | 167, 199 |
| Bsh1236I | CGCG | 1 cut(s) | 148 |
| BshFI | GGCC | 2 cut(s) | 277, 295 |
| BslFI | GGGAC | 1 cut(s) | 31 |
| BsmAI | GTCTC | 1 cut(s) | 205 |
| BsmBI | CGTCTC | 1 cut(s) | 205 |
| BsmFI | GGGAC | 1 cut(s) | 31 |
| BsnI | GGCC | 2 cut(s) | 277, 295 |
| Bsp143I | GATC | 2 cut(s) | 30, 240 |
| BspACI | CCGC | 3 cut(s) | 108, 129, 231 |
| BspANI | GGCC | 2 cut(s) | 277, 295 |
| BspCNI | CTCAG | 1 cut(s) | 151 |
| BspFNI | CGCG | 1 cut(s) | 148 |
| BspLI | GGNNCC | 2 cut(s) | 19, 20 |
| BssMI | GATC | 2 cut(s) | 30, 240 |
| Bst4CI | ACNGT | 1 cut(s) | 288 |
| Bst6I | CTCTTC | 1 cut(s) | 86 |
| BstDEI | CTNAG | 1 cut(s) | 138 |
| BstFNI | CGCG | 1 cut(s) | 148 |
| BstHHI | GCGC | 1 cut(s) | 150 |
| BstKTI | GATC | 2 cut(s) | 33, 243 |
| BstMAI | GTCTC | 1 cut(s) | 205 |
| BstMBI | GATC | 2 cut(s) | 30, 240 |
| BstNSI | RCATGY | 2 cut(s) | 237, 249 |
| BstUI | CGCG | 1 cut(s) | 148 |
| BsuI | GTATCC | 1 cut(s) | 254 |
| BsuRI | GGCC | 2 cut(s) | 277, 295 |
| CfoI | GCGC | 1 cut(s) | 150 |
| Cfr13I | GGNCC | 1 cut(s) | 18 |
| CviAII | CATG | 3 cut(s) | 7, 234, 246 |
| CviJI | RGCY | 5 cut(s) | 43, 195, 227, 277, 295 |
| CviKI_1 | RGCY | 5 cut(s) | 43, 195, 227, 277, 295 |
| DdeI | CTNAG | 1 cut(s) | 138 |
| DpnI | GATC | 2 cut(s) | 32, 242 |
| DpnII | GATC | 2 cut(s) | 30, 240 |
| EaeI | YGGCCR | 1 cut(s) | 293 |
| Eam1104I | CTCTTC | 1 cut(s) | 86 |
| EarI | CTCTTC | 1 cut(s) | 86 |
| EciI | GGCGGA | 1 cut(s) | 118 |
| Eco47I | GGWCC | 1 cut(s) | 18 |
| EcoO109I | RGGNCCY | 1 cut(s) | 18 |
| Esp3I | CGTCTC | 1 cut(s) | 205 |
| FaeI | CATG | 3 cut(s) | 10, 237, 249 |
| FaiI | YATR | 4 cut(s) | 8, 14, 235, 247 |
| FaqI | GGGAC | 1 cut(s) | 31 |
| FatI | CATG | 3 cut(s) | 6, 233, 245 |
| GlaI | GCGC | 1 cut(s) | 149 |
| GsuI | CTGGAG | 1 cut(s) | 33 |
| HaeIII | GGCC | 2 cut(s) | 277, 295 |
| HhaI | GCGC | 1 cut(s) | 150 |
| Hin1II | CATG | 3 cut(s) | 10, 237, 249 |
| Hin6I | GCGC | 1 cut(s) | 148 |
| HinP1I | GCGC | 1 cut(s) | 148 |
| HinfI | GANTC | 2 cut(s) | 125, 206 |
| HphI | GGTGA | 1 cut(s) | 276 |
| Hpy188I | TCNGA | 3 cut(s) | 141, 205, 269 |
| Hpy188III | TCNNGA | 3 cut(s) | 34, 50, 258 |
| Hpy99I | CGWCG | 1 cut(s) | 292 |
| HpyCH4III | ACNGT | 1 cut(s) | 288 |
| HpyCH4IV | ACGT | 1 cut(s) | 302 |
| HpyF3I | CTNAG | 1 cut(s) | 138 |
| HpySE526I | ACGT | 1 cut(s) | 302 |
| Hsp92II | CATG | 3 cut(s) | 10, 237, 249 |
| HspAI | GCGC | 1 cut(s) | 148 |
| KflI | GGGWCCC | 1 cut(s) | 18 |
| Kzo9I | GATC | 2 cut(s) | 30, 240 |
| LmnI | GCTCC | 1 cut(s) | 200 |
| LpnPI | CCDG | 2 cut(s) | 19, 63 |
| MaeII | ACGT | 1 cut(s) | 302 |
| MalI | GATC | 2 cut(s) | 32, 242 |
| MboI | GATC | 2 cut(s) | 30, 240 |
| MboII | GAAGA | 4 cut(s) | 37, 40, 49, 73 |
| MlsI | TGGCCA | 1 cut(s) | 295 |
| MluCI | AATT | 1 cut(s) | 59 |
| MluNI | TGGCCA | 1 cut(s) | 295 |
| MlyI | GAGTC | 1 cut(s) | 200 |
| MmeI | TCCRAC | 1 cut(s) | 228 |
| Mox20I | TGGCCA | 1 cut(s) | 295 |
| MscI | TGGCCA | 1 cut(s) | 295 |
| MslI | CAYNNNNRTG | 1 cut(s) | 289 |
| Msp20I | TGGCCA | 1 cut(s) | 295 |
| MvnI | CGCG | 1 cut(s) | 148 |
| NdeII | GATC | 2 cut(s) | 30, 240 |
| NlaIII | CATG | 3 cut(s) | 10, 237, 249 |
| NlaIV | GGNNCC | 2 cut(s) | 19, 20 |
| NspI | RCATGY | 2 cut(s) | 237, 249 |
| OliI | CACNNNNGTG | 1 cut(s) | 289 |
| PciI | ACATGT | 1 cut(s) | 245 |
| PfeI | GAWTC | 1 cut(s) | 125 |
| PleI | GAGTC | 1 cut(s) | 200 |
| PpsI | GAGTC | 1 cut(s) | 200 |
| PpuMI | RGGWCCY | 1 cut(s) | 18 |
| PscI | ACATGT | 1 cut(s) | 245 |
| Psp5II | RGGWCCY | 1 cut(s) | 18 |
| PspN4I | GGNNCC | 2 cut(s) | 19, 20 |
| PspPI | GGNCC | 1 cut(s) | 18 |
| PspPPI | RGGWCCY | 1 cut(s) | 18 |
| RseI | CAYNNNNRTG | 1 cut(s) | 289 |
| Sau3AI | GATC | 2 cut(s) | 30, 240 |
| Sau96I | GGNCC | 1 cut(s) | 18 |
| SchI | GAGTC | 1 cut(s) | 200 |
| SetI | ASST | 5 cut(s) | 45, 102, 186, 197, 305 |
| SinI | GGWCC | 1 cut(s) | 18 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 289 |
| SmlI | CTYRAG | 1 cut(s) | 215 |
| SmoI | CTYRAG | 1 cut(s) | 215 |
| Sse9I | AATT | 1 cut(s) | 59 |
| SsiI | CCGC | 3 cut(s) | 108, 129, 231 |
| TaaI | ACNGT | 1 cut(s) | 288 |
| TaiI | ACGT | 1 cut(s) | 305 |
| TaqI | TCGA | 1 cut(s) | 239 |
| TasI | AATT | 1 cut(s) | 59 |
| TfiI | GAWTC | 1 cut(s) | 125 |
| TspGWI | ACGGA | 1 cut(s) | 187 |
| VpaK11BI | GGWCC | 1 cut(s) | 18 |
| XceI | RCATGY | 2 cut(s) | 237, 249 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 288 |