pycom11g21730

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
N/A
Physical Location & Seq
Forward (+)
24797159 .. 24797798
640 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 504 bp
ATGAATAAAAATCCAATACTTTGTCTACTAAGATATTGGACCACGCCATTTTTAGTTACATTCCATTTGAGGCTAGATAGGATAACTATTATGACCATCATATTTAGAAACCATTTCAATTACATTCCAATCGAGACTGGATACGATAATTATTACGGCTACCATGAAATTGTCCATTTTTCTAAGAGTGCTACTAGACCCACTACAGTATTTTATTTCCTCACTCACATTATAATCTCACCCACCACAAAAATAAAACAAAATCTACAAAGACACAATTCAATTAATCAAGATGCAAGAGGATCACATCTATACAATACATTTTACACAATTCCAGGCGTCTTCTCCATCCTCCAGCACACCACCCACCCCGAGAACACCGTGTTCCACTTCATCTGCGCCTGCCACAACAATCGGTATGTGGATTGTGGACAGACAAGCCTTTATCTTAGTTTTCAAGGCTATTTGCTAGTACTGACAACAAAAACAAACAGATCAAACTAA

Protein Analysis

168

Amino Acids

19.72

Weight (kDa)

9.36

Isoelectric Point (pI)

41.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 233
AccI GTMKAC 1 cut(s) 25
AclWI GGATC 1 cut(s) 310
AcyI GRCGYC 1 cut(s) 339
AfaI GTAC 1 cut(s) 474
AgsI TTSAA 3 cut(s) 118, 282, 458
AjnI CCWGG 1 cut(s) 334
Alw26I GTCTC 1 cut(s) 128
AlwI GGATC 1 cut(s) 310
Ama87I CYCGRG 1 cut(s) 371
AseI ATTAAT 1 cut(s) 285
AspLEI GCGC 1 cut(s) 401
AspS9I GGNCC 1 cut(s) 39
AsuHPI GGTGA 1 cut(s) 231
AvaI CYCGRG 1 cut(s) 371
AvaII GGWCC 1 cut(s) 39
BbsI GAAGAC 1 cut(s) 334
BccI CCATC 2 cut(s) 104, 356
BceAI ACGGC 1 cut(s) 172
BciT130I CCWGG 1 cut(s) 336
BciVI GTATCC 1 cut(s) 134
BcoDI GTCTC 1 cut(s) 128
BfaI CTAG 3 cut(s) 74, 195, 470
BfmI CTRYAG 1 cut(s) 204
BfuI GTATCC 1 cut(s) 134
BmcAI AGTACT 1 cut(s) 474
Bme1390I CCNGG 1 cut(s) 336
Bme18I GGWCC 1 cut(s) 39
BmeT110I CYCGRG 1 cut(s) 371
BmgT120I GGNCC 1 cut(s) 39
BmrFI CCNGG 1 cut(s) 336
BmsI GCATC 1 cut(s) 283
BpiI GAAGAC 1 cut(s) 334
BpmI CTGGAG 1 cut(s) 338
BsaHI GRCGYC 1 cut(s) 339
Bse1I ACTGG 1 cut(s) 142
BseBI CCWGG 1 cut(s) 336
BseGI GGATG 1 cut(s) 348
BseNI ACTGG 1 cut(s) 142
BsiHKCI CYCGRG 1 cut(s) 371
BsmAI GTCTC 1 cut(s) 128
BsoBI CYCGRG 1 cut(s) 371
Bsp143I GATC 2 cut(s) 302, 494
BspPI GGATC 1 cut(s) 310
BsrI ACTGG 1 cut(s) 142
BssMI GATC 2 cut(s) 302, 494
BssNI GRCGYC 1 cut(s) 339
Bst2UI CCWGG 1 cut(s) 336
Bst4CI ACNGT 2 cut(s) 208, 382
BstACI GRCGYC 1 cut(s) 339
BstC8I GCNNGC 1 cut(s) 403
BstDEI CTNAG 3 cut(s) 29, 183, 449
BstF5I GGATG 1 cut(s) 348
BstHHI GCGC 1 cut(s) 401
BstKTI GATC 2 cut(s) 305, 497
BstMAI GTCTC 1 cut(s) 128
BstMBI GATC 2 cut(s) 302, 494
BstNI CCWGG 1 cut(s) 336
BstSCI CCNGG 1 cut(s) 334
BstSFI CTRYAG 1 cut(s) 204
BstV2I GAAGAC 1 cut(s) 334
BsuI GTATCC 1 cut(s) 134
BtsCI GGATG 1 cut(s) 348
Cac8I GCNNGC 1 cut(s) 403
CfoI GCGC 1 cut(s) 401
Cfr13I GGNCC 1 cut(s) 39
CseI GACGC 1 cut(s) 328
Csp6I GTAC 1 cut(s) 473
CviAII CATG 1 cut(s) 164
CviJI RGCY 4 cut(s) 73, 159, 441, 462
CviKI_1 RGCY 4 cut(s) 73, 159, 441, 462
CviQI GTAC 1 cut(s) 473
DdeI CTNAG 3 cut(s) 29, 183, 449
DpnI GATC 2 cut(s) 304, 496
DpnII GATC 2 cut(s) 302, 494
Eco47I GGWCC 1 cut(s) 39
Eco88I CYCGRG 1 cut(s) 371
EcoRII CCWGG 1 cut(s) 334
FaeI CATG 1 cut(s) 167
FaiI YATR 6 cut(s) 92, 101, 165, 233, 313, 420
FatI CATG 1 cut(s) 163
FblI GTMKAC 1 cut(s) 25
FokI GGATG 1 cut(s) 335
FspBI CTAG 3 cut(s) 74, 195, 470
GlaI GCGC 1 cut(s) 400
GsuI CTGGAG 1 cut(s) 338
HgaI GACGC 1 cut(s) 328
HhaI GCGC 1 cut(s) 401
Hin1I GRCGYC 1 cut(s) 339
Hin1II CATG 1 cut(s) 167
Hin6I GCGC 1 cut(s) 399
HinP1I GCGC 1 cut(s) 399
HphI GGTGA 1 cut(s) 231
Hpy166II GTNNAC 2 cut(s) 26, 431
Hpy188III TCNNGA 2 cut(s) 133, 290
Hpy8I GTNNAC 2 cut(s) 26, 431
HpyCH4III ACNGT 2 cut(s) 208, 382
HpyCH4V TGCA 1 cut(s) 296
HpyF3I CTNAG 3 cut(s) 29, 183, 449
Hsp92I GRCGYC 1 cut(s) 339
Hsp92II CATG 1 cut(s) 167
HspAI GCGC 1 cut(s) 399
Kzo9I GATC 2 cut(s) 302, 494
LpnPI CCDG 5 cut(s) 123, 321, 348, 368, 415
LweI GCATC 1 cut(s) 283
MaeI CTAG 3 cut(s) 74, 195, 470
MaeIII GTNAC 1 cut(s) 55
MalI GATC 2 cut(s) 304, 496
MboI GATC 2 cut(s) 302, 494
MboII GAAGA 1 cut(s) 334
MluCI AATT 6 cut(s) 118, 148, 168, 277, 282, 330
MnlI CCTC 4 cut(s) 63, 230, 293, 362
MseI TTAA 1 cut(s) 285
MspR9I CCNGG 1 cut(s) 336
MvaI CCWGG 1 cut(s) 336
NdeII GATC 2 cut(s) 302, 494
NlaIII CATG 1 cut(s) 167
PshBI ATTAAT 1 cut(s) 285
PsiI TTATAA 1 cut(s) 233
Psp6I CCWGG 1 cut(s) 334
PspGI CCWGG 1 cut(s) 334
PspPI GGNCC 1 cut(s) 39
RsaI GTAC 1 cut(s) 474
RsaNI GTAC 1 cut(s) 473
SaqAI TTAA 1 cut(s) 285
Sau3AI GATC 2 cut(s) 302, 494
Sau96I GGNCC 1 cut(s) 39
ScaI AGTACT 1 cut(s) 474
ScrFI CCNGG 1 cut(s) 336
SfaNI GCATC 1 cut(s) 283
SfcI CTRYAG 1 cut(s) 204
SinI GGWCC 1 cut(s) 39
Sse9I AATT 6 cut(s) 118, 148, 168, 277, 282, 330
SspMI CTAG 3 cut(s) 74, 195, 470
StyD4I CCNGG 1 cut(s) 334
TaaI ACNGT 2 cut(s) 208, 382
TaqI TCGA 1 cut(s) 132
TasI AATT 6 cut(s) 118, 148, 168, 277, 282, 330
TatI WGTACW 1 cut(s) 472
Tru1I TTAA 1 cut(s) 285
Tru9I TTAA 1 cut(s) 285
TspDTI ATGAA 3 cut(s) 17, 180, 382
VpaK11BI GGWCC 1 cut(s) 39
VspI ATTAAT 1 cut(s) 285
XmiI GTMKAC 1 cut(s) 25
XspI CTAG 3 cut(s) 74, 195, 470
ZrmI AGTACT 1 cut(s) 474
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.