pycom11g22300
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
N/A
Physical Location & Seq
Forward (+)
25300301 .. 25300519
219 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 219 bp
ATGGAGGTATTGGGGTTTACTCCAATGGCATTCCTCAAATGGGTTCTCTTGGCCTGCTGTATTGGTTTGGTTTTCGGTCTTAATTCCCCAATCCAGTCCTGTGATCCAAATGATTTTCTTGCACTGAGAGAGTTTGCAGGAAACCTCACAAATGGGTCTATCGATCACAGCATGGCACAACACATCAACTTGCTGCCAATGGGATGGTGTTGTCTGTGA

Protein Analysis

73

Amino Acids

7.9

Weight (kDa)

4.8

Isoelectric Point (pI)

43.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 98
AfiI CCNNNNNNNGG 1 cut(s) 40
AlwI GGATC 1 cut(s) 98
AoxI GGCC 1 cut(s) 51
ApeKI GCWGC 1 cut(s) 193
BbvI GCAGC 1 cut(s) 180
BccI CCATC 1 cut(s) 198
BisI GCNGC 1 cut(s) 194
BlsI GCNGC 1 cut(s) 195
Bsa29I ATCGAT 1 cut(s) 162
Bsc4I CCNNNNNNNGG 1 cut(s) 40
Bse1I ACTGG 1 cut(s) 94
BseCI ATCGAT 1 cut(s) 162
BseGI GGATG 1 cut(s) 209
BseLI CCNNNNNNNGG 1 cut(s) 40
BseMII CTCAG 1 cut(s) 116
BseNI ACTGG 1 cut(s) 94
BseXI GCAGC 1 cut(s) 180
BshFI GGCC 1 cut(s) 53
BshVI ATCGAT 1 cut(s) 162
BslI CCNNNNNNNGG 1 cut(s) 40
BsmI GAATGC 1 cut(s) 29
BsnI GGCC 1 cut(s) 53
Bsp143I GATC 2 cut(s) 103, 163
BspANI GGCC 1 cut(s) 53
BspCNI CTCAG 1 cut(s) 117
BspDI ATCGAT 1 cut(s) 162
BspPI GGATC 1 cut(s) 98
BsrI ACTGG 1 cut(s) 94
BssMI GATC 2 cut(s) 103, 163
BstC8I GCNNGC 1 cut(s) 55
BstDEI CTNAG 1 cut(s) 125
BstF5I GGATG 1 cut(s) 209
BstKTI GATC 2 cut(s) 106, 166
BstMBI GATC 2 cut(s) 103, 163
BstV1I GCAGC 1 cut(s) 180
BstXI CCANNNNNNTGG 1 cut(s) 204
Bsu15I ATCGAT 1 cut(s) 162
BsuRI GGCC 1 cut(s) 53
BsuTUI ATCGAT 1 cut(s) 162
BtsCI GGATG 1 cut(s) 209
BtsIMutI CAGTG 1 cut(s) 122
Cac8I GCNNGC 1 cut(s) 55
ClaI ATCGAT 1 cut(s) 162
CviAII CATG 1 cut(s) 172
CviJI RGCY 1 cut(s) 53
CviKI_1 RGCY 1 cut(s) 53
DdeI CTNAG 1 cut(s) 125
DpnI GATC 2 cut(s) 105, 165
DpnII GATC 2 cut(s) 103, 163
FaeI CATG 1 cut(s) 175
FaiI YATR 1 cut(s) 173
FatI CATG 1 cut(s) 171
Fnu4HI GCNGC 1 cut(s) 194
Fsp4HI GCNGC 1 cut(s) 194
GluI GCNGC 1 cut(s) 194
HaeIII GGCC 1 cut(s) 53
Hin1II CATG 1 cut(s) 175
Hpy166II GTNNAC 1 cut(s) 18
Hpy8I GTNNAC 1 cut(s) 18
HpyCH4V TGCA 2 cut(s) 122, 137
HpyF3I CTNAG 1 cut(s) 125
Hsp92II CATG 1 cut(s) 175
Kzo9I GATC 2 cut(s) 103, 163
LpnPI CCDG 4 cut(s) 67, 107, 112, 123
Lsp1109I GCAGC 1 cut(s) 180
MalI GATC 2 cut(s) 105, 165
MboI GATC 2 cut(s) 103, 163
MluCI AATT 1 cut(s) 82
MnlI CCTC 2 cut(s) 44, 155
MseI TTAA 1 cut(s) 81
Mva1269I GAATGC 1 cut(s) 29
NdeII GATC 2 cut(s) 103, 163
NlaIII CATG 1 cut(s) 175
PctI GAATGC 1 cut(s) 29
PkrI GCNGC 1 cut(s) 195
SaqAI TTAA 1 cut(s) 81
SatI GCNGC 1 cut(s) 194
Sau3AI GATC 2 cut(s) 103, 163
SetI ASST 2 cut(s) 9, 147
SgeI CNNG 8 cut(s) 61, 66, 106, 111, 131, 150, 184, 202
Sse9I AATT 1 cut(s) 82
TaqI TCGA 1 cut(s) 162
TaqII GACCGA 1 cut(s) 65
TasI AATT 1 cut(s) 82
Tru1I TTAA 1 cut(s) 81
Tru9I TTAA 1 cut(s) 81
TscAI CASTG 1 cut(s) 129
TseI GCWGC 1 cut(s) 193
TspRI CASTG 1 cut(s) 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.