pycom12g06940

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
N/A
Physical Location & Seq
Forward (+)
7221696 .. 7222022
327 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 327 bp
ATGGTGAAGACTTACTGGTGTAAATACTCCAAGCTGCAAAGCTATGATACTTCATGGCCTCAAGTTGAAGGATGGGGAGATGAGGATGCAAATCTCATGGATTTTGCCCCAAGCCTACGTGACGAAGTCTTCACCATCGATATGCCAGAAGAATACAACGAGGGAGCCCTGGAAGTGCAACTGTTCAACCAGGAAATGACGGCTGTGACTTTGTACAGCCTTCCTGATATGGAAACTGAACACAGTGGAGCGTTACCTTTCCCAAGGGCAAATGCCTACTTCAGCATAAGTCCTCAAAGAAAACCCGATGTTCAAATCCATATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

109

Amino Acids

12.5

Weight (kDa)

4.28

Isoelectric Point (pI)

47.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 265
AfaI GTAC 1 cut(s) 215
AgsI TTSAA 3 cut(s) 68, 187, 314
AjnI CCWGG 2 cut(s) 168, 189
AluBI AGCT 2 cut(s) 34, 42
AluI AGCT 2 cut(s) 34, 42
AoxI GGCC 1 cut(s) 56
ApeKI GCWGC 1 cut(s) 34
AsuHPI GGTGA 2 cut(s) 16, 124
BanII GRGCYC 1 cut(s) 169
BbsI GAAGAC 2 cut(s) 14, 121
BbvI GCAGC 1 cut(s) 21
BccI CCATC 2 cut(s) 66, 143
BceAI ACGGC 1 cut(s) 216
BciT130I CCWGG 2 cut(s) 170, 191
BisI GCNGC 1 cut(s) 35
BlsI GCNGC 1 cut(s) 36
Bme1390I CCNGG 2 cut(s) 170, 191
BmiI GGNNCC 1 cut(s) 166
BmrFI CCNGG 2 cut(s) 170, 191
BmsI GCATC 1 cut(s) 76
BpiI GAAGAC 2 cut(s) 14, 121
BpuEI CTTGAG 1 cut(s) 45
Bsa29I ATCGAT 1 cut(s) 138
BsaAI YACGTR 1 cut(s) 119
BsaBI GATNNNNATC 1 cut(s) 90
BsaJI CCNNGG 2 cut(s) 168, 263
Bse1I ACTGG 1 cut(s) 20
Bse8I GATNNNNATC 1 cut(s) 90
BseBI CCWGG 2 cut(s) 170, 191
BseCI ATCGAT 1 cut(s) 138
BseDI CCNNGG 2 cut(s) 168, 263
BseGI GGATG 2 cut(s) 77, 91
BseJI GATNNNNATC 1 cut(s) 90
BseNI ACTGG 1 cut(s) 20
BseXI GCAGC 1 cut(s) 21
BshFI GGCC 1 cut(s) 58
BshVI ATCGAT 1 cut(s) 138
BsnI GGCC 1 cut(s) 58
Bsp1286I GDGCHC 1 cut(s) 169
Bsp1407I TGTACA 1 cut(s) 213
BspANI GGCC 1 cut(s) 58
BspDI ATCGAT 1 cut(s) 138
BspLI GGNNCC 1 cut(s) 166
BsrGI TGTACA 1 cut(s) 213
BsrI ACTGG 1 cut(s) 20
BssECI CCNNGG 2 cut(s) 168, 263
BssT1I CCWWGG 1 cut(s) 263
Bst2UI CCWGG 2 cut(s) 170, 191
Bst4CI ACNGT 2 cut(s) 183, 245
BstAUI TGTACA 1 cut(s) 213
BstBAI YACGTR 1 cut(s) 119
BstF5I GGATG 2 cut(s) 77, 91
BstNI CCWGG 2 cut(s) 170, 191
BstSCI CCNGG 2 cut(s) 168, 189
BstV1I GCAGC 1 cut(s) 21
BstV2I GAAGAC 2 cut(s) 14, 121
Bsu15I ATCGAT 1 cut(s) 138
BsuRI GGCC 1 cut(s) 58
BsuTUI ATCGAT 1 cut(s) 138
BtsCI GGATG 2 cut(s) 77, 91
BtsIMutI CAGTG 1 cut(s) 250
ClaI ATCGAT 1 cut(s) 138
Csp6I GTAC 1 cut(s) 214
CviAII CATG 2 cut(s) 54, 97
CviJI RGCY 7 cut(s) 34, 42, 58, 114, 167, 203, 219
CviKI_1 RGCY 7 cut(s) 34, 42, 58, 114, 167, 203, 219
CviQI GTAC 1 cut(s) 214
Eco130I CCWWGG 1 cut(s) 263
Eco24I GRGCYC 1 cut(s) 169
Eco57I CTGAAG 1 cut(s) 265
EcoRII CCWGG 2 cut(s) 168, 189
EcoT14I CCWWGG 1 cut(s) 263
EcoT38I GRGCYC 1 cut(s) 169
ErhI CCWWGG 1 cut(s) 263
FaeI CATG 2 cut(s) 57, 100
FaiI YATR 7 cut(s) 45, 55, 98, 143, 230, 287, 321
FatI CATG 2 cut(s) 53, 96
Fnu4HI GCNGC 1 cut(s) 35
FokI GGATG 2 cut(s) 84, 98
FriOI GRGCYC 1 cut(s) 169
Fsp4HI GCNGC 1 cut(s) 35
GluI GCNGC 1 cut(s) 35
HaeIII GGCC 1 cut(s) 58
Hin1II CATG 2 cut(s) 57, 100
HphI GGTGA 2 cut(s) 16, 124
Hpy188III TCNNGA 1 cut(s) 224
HpyAV CCTTC 2 cut(s) 62, 230
HpyCH4III ACNGT 2 cut(s) 183, 245
HpyCH4IV ACGT 1 cut(s) 118
HpyCH4V TGCA 3 cut(s) 37, 89, 178
HpySE526I ACGT 1 cut(s) 118
Hsp92II CATG 2 cut(s) 57, 100
LmnI GCTCC 2 cut(s) 164, 248
LpnPI CCDG 6 cut(s) 155, 159, 176, 182, 203, 237
Lsp1109I GCAGC 1 cut(s) 21
LweI GCATC 1 cut(s) 76
MaeII ACGT 1 cut(s) 118
MaeIII GTNAC 3 cut(s) 119, 205, 252
MboII GAAGA 3 cut(s) 19, 121, 161
MhlI GDGCHC 1 cut(s) 169
MnlI CCTC 4 cut(s) 69, 76, 154, 303
MslI CAYNNNNRTG 1 cut(s) 140
MspR9I CCNGG 2 cut(s) 170, 191
MvaI CCWGG 2 cut(s) 170, 191
NlaIII CATG 2 cut(s) 57, 100
NlaIV GGNNCC 1 cut(s) 166
NmuCI GTSAC 2 cut(s) 119, 205
PflFI GACNNNGTC 1 cut(s) 125
PkrI GCNGC 1 cut(s) 36
Ppu21I YACGTR 1 cut(s) 119
Psp6I CCWGG 2 cut(s) 168, 189
PspGI CCWGG 2 cut(s) 168, 189
PspN4I GGNNCC 1 cut(s) 166
PsyI GACNNNGTC 1 cut(s) 125
RsaI GTAC 1 cut(s) 215
RsaNI GTAC 1 cut(s) 214
RseI CAYNNNNRTG 1 cut(s) 140
SatI GCNGC 1 cut(s) 35
ScrFI CCNGG 2 cut(s) 170, 191
SduI GDGCHC 1 cut(s) 169
SetI ASST 4 cut(s) 36, 44, 121, 259
SfaNI GCATC 1 cut(s) 76
SmiMI CAYNNNNRTG 1 cut(s) 140
SmlI CTYRAG 1 cut(s) 60
SmoI CTYRAG 1 cut(s) 60
StyD4I CCNGG 2 cut(s) 168, 189
StyI CCWWGG 1 cut(s) 263
TaaI ACNGT 2 cut(s) 183, 245
TaiI ACGT 1 cut(s) 121
TaqI TCGA 1 cut(s) 138
TatI WGTACW 1 cut(s) 213
TscAI CASTG 1 cut(s) 250
TseFI GTSAC 2 cut(s) 119, 205
TseI GCWGC 1 cut(s) 34
Tsp45I GTSAC 2 cut(s) 119, 205
TspDTI ATGAA 1 cut(s) 42
TspRI CASTG 1 cut(s) 250
Tth111I GACNNNGTC 1 cut(s) 125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.