pycom12g13200

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
N/A
Physical Location & Seq
Forward (+)
15681471 .. 15682926
1456 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 258 bp
ATGCTCTTTGATGAAGAGAACGGGTACACCCCTGAGTATATATATGGGAATTACTTTGAGAGGCTGATTGGTAAGGCTCGTGGAAATGGCGGCGGCGGAAGTGGTGGTGTTCGTGAAGAGGAGACCAAGGAGGAAGAGGAGGAAGATAAAGAGAAGGTGACCACTTTGGGGCTCAGGGAGTTGATTGATGGTGTGGATTCGGGTCAGGGTCGGATTCTTCATCGGAATATCAATGCGGGTTCTACAAGGATTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

86

Amino Acids

9.44

Weight (kDa)

4.68

Isoelectric Point (pI)

46.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 90, 93, 96, 236
AfaI GTAC 1 cut(s) 26
AfiI CCNNNNNNNGG 1 cut(s) 168
Alw26I GTCTC 1 cut(s) 116
AseI ATTAAT 1 cut(s) 252
AsuHPI GGTGA 1 cut(s) 169
BanII GRGCYC 1 cut(s) 174
BauI CACGAG 1 cut(s) 78
BccI CCATC 1 cut(s) 182
BcoDI GTCTC 1 cut(s) 116
BisI GCNGC 2 cut(s) 91, 94
BlsI GCNGC 2 cut(s) 92, 95
Bpu10I CCTNAGC 1 cut(s) 173
BsaI GGTCTC 1 cut(s) 116
BsaJI CCNNGG 1 cut(s) 126
Bsc4I CCNNNNNNNGG 1 cut(s) 168
BseDI CCNNGG 1 cut(s) 126
BseLI CCNNNNNNNGG 1 cut(s) 168
BseMII CTCAG 2 cut(s) 24, 187
BseRI GAGGAG 2 cut(s) 134, 152
BslI CCNNNNNNNGG 1 cut(s) 168
BsmAI GTCTC 1 cut(s) 116
Bso31I GGTCTC 1 cut(s) 116
Bsp1286I GDGCHC 1 cut(s) 174
BspACI CCGC 4 cut(s) 90, 93, 96, 236
BspCNI CTCAG 2 cut(s) 25, 186
BspTNI GGTCTC 1 cut(s) 116
BssECI CCNNGG 1 cut(s) 126
BssSI CACGAG 1 cut(s) 78
BssT1I CCWWGG 1 cut(s) 126
Bst2BI CACGAG 1 cut(s) 78
Bst6I CTCTTC 3 cut(s) 9, 111, 129
BstDEI CTNAG 2 cut(s) 33, 173
BstEII GGTNACC 1 cut(s) 157
BstMAI GTCTC 1 cut(s) 116
BstPI GGTNACC 1 cut(s) 157
Csp6I GTAC 1 cut(s) 25
CviJI RGCY 3 cut(s) 64, 77, 172
CviKI_1 RGCY 3 cut(s) 64, 77, 172
CviQI GTAC 1 cut(s) 25
DdeI CTNAG 2 cut(s) 33, 173
Eam1104I CTCTTC 3 cut(s) 9, 111, 129
EarI CTCTTC 3 cut(s) 9, 111, 129
EciI GGCGGA 1 cut(s) 111
Eco130I CCWWGG 1 cut(s) 126
Eco24I GRGCYC 1 cut(s) 174
Eco31I GGTCTC 1 cut(s) 116
Eco91I GGTNACC 1 cut(s) 157
EcoO65I GGTNACC 1 cut(s) 157
EcoT14I CCWWGG 1 cut(s) 126
EcoT38I GRGCYC 1 cut(s) 174
ErhI CCWWGG 1 cut(s) 126
FaiI YATR 4 cut(s) 39, 41, 43, 45
FauI CCCGC 1 cut(s) 229
Fnu4HI GCNGC 2 cut(s) 91, 94
FriOI GRGCYC 1 cut(s) 174
Fsp4HI GCNGC 2 cut(s) 91, 94
GluI GCNGC 2 cut(s) 91, 94
HinfI GANTC 2 cut(s) 197, 214
HphI GGTGA 1 cut(s) 169
Hpy166II GTNNAC 1 cut(s) 27
Hpy188I TCNGA 2 cut(s) 213, 225
Hpy188III TCNNGA 1 cut(s) 113
Hpy8I GTNNAC 1 cut(s) 27
HpyAV CCTTC 1 cut(s) 148
HpyF3I CTNAG 2 cut(s) 33, 173
LpnPI CCDG 3 cut(s) 45, 160, 191
MaeIII GTNAC 1 cut(s) 157
MboII GAAGA 5 cut(s) 26, 128, 146, 155, 209
MhlI GDGCHC 1 cut(s) 174
MluCI AATT 2 cut(s) 49, 253
MmeI TCCRAC 1 cut(s) 191
MnlI CCTC 5 cut(s) 54, 112, 124, 130, 133
MseI TTAA 2 cut(s) 252, 256
NmuCI GTSAC 1 cut(s) 157
PacI TTAATTAA 1 cut(s) 256
PfeI GAWTC 2 cut(s) 197, 214
PkrI GCNGC 2 cut(s) 92, 95
PshBI ATTAAT 1 cut(s) 252
PspEI GGTNACC 1 cut(s) 157
RsaI GTAC 1 cut(s) 26
RsaNI GTAC 1 cut(s) 25
SaqAI TTAA 2 cut(s) 252, 256
SatI GCNGC 2 cut(s) 91, 94
SduI GDGCHC 1 cut(s) 174
SetI ASST 1 cut(s) 159
Sse9I AATT 2 cut(s) 49, 253
SsiI CCGC 4 cut(s) 90, 93, 96, 236
StyI CCWWGG 1 cut(s) 126
TasI AATT 2 cut(s) 49, 253
TauI GCSGC 2 cut(s) 93, 96
TfiI GAWTC 2 cut(s) 197, 214
Tru1I TTAA 2 cut(s) 252, 256
Tru9I TTAA 2 cut(s) 252, 256
TseFI GTSAC 1 cut(s) 157
Tsp45I GTSAC 1 cut(s) 157
TspDTI ATGAA 2 cut(s) 27, 209
VspI ATTAAT 1 cut(s) 252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.