pycom12g14440

Aldo-keto reductase family 4 member

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
N/A
Physical Location & Seq
Forward (+)
16972494 .. 16973772
1279 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 189 bp
ATGGGCGAAAACAAATCAGAAACCTTGTATTTTGATCTGAATCCGAGAGCTAAGATTCCATCTGTTGGTCTTGGGACATGGAAGGTTGAAACGGGCTTTGTCAGTCGAGCAGTCATCGCGGCAGTCAAGGTTCATTCTCCATATAAGCTATGGCATATTCTCCTCTGGGTTCTCCAGGGGTTTGGGTGA

Protein Analysis

63

Amino Acids

6.96

Weight (kDa)

9.6

Isoelectric Point (pI)

41.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 65
AccII CGCG 1 cut(s) 119
AciI CCGC 1 cut(s) 119
AfiI CCNNNNNNNGG 1 cut(s) 65
AgsI TTSAA 1 cut(s) 89
AjnI CCWGG 1 cut(s) 174
AluBI AGCT 2 cut(s) 50, 148
AluI AGCT 2 cut(s) 50, 148
BccI CCATC 1 cut(s) 67
BciT130I CCWGG 1 cut(s) 176
BisI GCNGC 1 cut(s) 120
BlsI GCNGC 1 cut(s) 121
Bme1390I CCNGG 1 cut(s) 176
BmrFI CCNGG 1 cut(s) 176
BpmI CTGGAG 1 cut(s) 158
BsaBI GATNNNNATC 1 cut(s) 39
BsaJI CCNNGG 1 cut(s) 175
Bsc4I CCNNNNNNNGG 1 cut(s) 65
Bse8I GATNNNNATC 1 cut(s) 39
BseBI CCWGG 1 cut(s) 176
BseDI CCNNGG 1 cut(s) 175
BseJI GATNNNNATC 1 cut(s) 39
BseLI CCNNNNNNNGG 1 cut(s) 65
BseRI GAGGAG 1 cut(s) 152
Bsh1236I CGCG 1 cut(s) 119
BslFI GGGAC 1 cut(s) 88
BslI CCNNNNNNNGG 1 cut(s) 65
BsmFI GGGAC 1 cut(s) 88
Bsp143I GATC 1 cut(s) 34
BspACI CCGC 1 cut(s) 119
BspFNI CGCG 1 cut(s) 119
BssECI CCNNGG 1 cut(s) 175
BssMI GATC 1 cut(s) 34
Bst2UI CCWGG 1 cut(s) 176
BstDEI CTNAG 1 cut(s) 51
BstFNI CGCG 1 cut(s) 119
BstKTI GATC 1 cut(s) 37
BstMBI GATC 1 cut(s) 34
BstMWI GCNNNNNNNGC 1 cut(s) 116
BstNI CCWGG 1 cut(s) 176
BstSCI CCNGG 1 cut(s) 174
BstUI CGCG 1 cut(s) 119
BstXI CCANNNNNNTGG 1 cut(s) 182
BtgZI GCGATG 1 cut(s) 100
CviAII CATG 1 cut(s) 78
CviJI RGCY 3 cut(s) 50, 96, 148
CviKI_1 RGCY 3 cut(s) 50, 96, 148
DdeI CTNAG 1 cut(s) 51
DpnI GATC 1 cut(s) 36
DpnII GATC 1 cut(s) 34
EcoRII CCWGG 1 cut(s) 174
FaeI CATG 1 cut(s) 81
FaiI YATR 5 cut(s) 79, 142, 144, 151, 156
FaqI GGGAC 1 cut(s) 88
FatI CATG 1 cut(s) 77
Fnu4HI GCNGC 1 cut(s) 120
Fsp4HI GCNGC 1 cut(s) 120
GluI GCNGC 1 cut(s) 120
GsuI CTGGAG 1 cut(s) 158
Hin1II CATG 1 cut(s) 81
HinfI GANTC 2 cut(s) 40, 55
Hpy188I TCNGA 3 cut(s) 19, 39, 45
HpyAV CCTTC 1 cut(s) 76
HpyF10VI GCNNNNNNNGC 1 cut(s) 116
HpyF3I CTNAG 1 cut(s) 51
Hsp92II CATG 1 cut(s) 81
Kzo9I GATC 1 cut(s) 34
LpnPI CCDG 2 cut(s) 151, 161
MalI GATC 1 cut(s) 36
MboI GATC 1 cut(s) 34
MnlI CCTC 1 cut(s) 173
MspR9I CCNGG 1 cut(s) 176
MvaI CCWGG 1 cut(s) 176
MvnI CGCG 1 cut(s) 119
MwoI GCNNNNNNNGC 1 cut(s) 116
NdeII GATC 1 cut(s) 34
NlaIII CATG 1 cut(s) 81
PfeI GAWTC 2 cut(s) 40, 55
PflMI CCANNNNNTGG 1 cut(s) 65
PkrI GCNGC 1 cut(s) 121
Psp6I CCWGG 1 cut(s) 174
PspGI CCWGG 1 cut(s) 174
SatI GCNGC 1 cut(s) 120
Sau3AI GATC 1 cut(s) 34
ScrFI CCNGG 1 cut(s) 176
SetI ASST 5 cut(s) 26, 52, 87, 132, 150
SgeI CNNG 9 cut(s) 37, 57, 83, 90, 105, 119, 130, 139, 178
SsiI CCGC 1 cut(s) 119
StyD4I CCNGG 1 cut(s) 174
TaqI TCGA 1 cut(s) 106
TauI GCSGC 1 cut(s) 122
TfiI GAWTC 2 cut(s) 40, 55
TspDTI ATGAA 1 cut(s) 122
Van91I CCANNNNNTGG 1 cut(s) 65
XcmI CCANNNNNNNNNTGG 1 cut(s) 147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.