pycom12g19650

Protein DEHYDRATION-INDUCED 19 homolog

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
N/A
Physical Location & Seq
Forward (+)
21400104 .. 21400439
336 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 336 bp
ATGCCTAAAGGGTCAGGATTTCTTGCCAAATCTCCTTTTATGTATAAAAAGTTTGGACAAGGGTTGGTCTTGTTGGTTGGACACAATTTCAATTTCATACACTATCTAGGCACGAACGATTGCATAGATATTGTCAAATTTCTACAAAGAGCATGCTATTCTGCCTTTCTGGTTTTCCCCTCGTTATGCTTCAGTATTGTAGGTCTAATACATTTGTTTGGTCACAGAAATGTGCAGTCGCCTCCTCTGTCCATCAAGGATAAGGAAGAGAAGACGAAAAGGTGTGCGTTTGTTCAGGGGATGTTGTTGTCCACCATTCTTGACGACGGTGTATGA

Protein Analysis

112

Amino Acids

12.42

Weight (kDa)

9.18

Isoelectric Point (pI)

48.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Di19_C PF14571 75 - 106 1.2e-09 Stress-induced protein Di19, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 137
AcuI CTGAAG 1 cut(s) 175
AgsI TTSAA 1 cut(s) 91
ApoI RAATTY 1 cut(s) 137
BbsI GAAGAC 1 cut(s) 278
BccI CCATC 1 cut(s) 260
BfaI CTAG 1 cut(s) 107
BpiI GAAGAC 1 cut(s) 278
BseGI GGATG 1 cut(s) 306
BseRI GAGGAG 1 cut(s) 234
BsgI GTGCAG 1 cut(s) 254
Bst4CI ACNGT 1 cut(s) 329
Bst6I CTCTTC 1 cut(s) 261
BstC8I GCNNGC 1 cut(s) 154
BstF5I GGATG 1 cut(s) 306
BstNSI RCATGY 1 cut(s) 156
BstV2I GAAGAC 1 cut(s) 278
BtsCI GGATG 1 cut(s) 306
Cac8I GCNNGC 1 cut(s) 154
CspCI CAANNNNNGTGG 2 cut(s) 301, 336
CviAII CATG 1 cut(s) 153
Eam1104I CTCTTC 1 cut(s) 261
EarI CTCTTC 1 cut(s) 261
Eco57I CTGAAG 1 cut(s) 175
FaeI CATG 1 cut(s) 156
FaiI YATR 7 cut(s) 41, 45, 98, 125, 154, 187, 334
FatI CATG 1 cut(s) 152
FokI GGATG 1 cut(s) 313
FspBI CTAG 1 cut(s) 107
Hin1II CATG 1 cut(s) 156
Hpy166II GTNNAC 1 cut(s) 312
Hpy188III TCNNGA 2 cut(s) 15, 320
Hpy8I GTNNAC 1 cut(s) 312
Hpy99I CGWCG 1 cut(s) 329
HpyCH4III ACNGT 1 cut(s) 329
HpyCH4V TGCA 2 cut(s) 123, 235
Hsp92II CATG 1 cut(s) 156
LpnPI CCDG 2 cut(s) 155, 281
MaeI CTAG 1 cut(s) 107
MaeIII GTNAC 1 cut(s) 221
MboII GAAGA 2 cut(s) 278, 283
MluCI AATT 3 cut(s) 85, 91, 137
MmeI TCCRAC 1 cut(s) 58
MnlI CCTC 3 cut(s) 190, 252, 255
MslI CAYNNNNRTG 1 cut(s) 228
NlaIII CATG 1 cut(s) 156
NmuCI GTSAC 1 cut(s) 221
NspI RCATGY 1 cut(s) 156
PaeI GCATGC 1 cut(s) 156
RseI CAYNNNNRTG 1 cut(s) 228
SetI ASST 2 cut(s) 205, 284
SmiMI CAYNNNNRTG 1 cut(s) 228
SphI GCATGC 1 cut(s) 156
Sse9I AATT 3 cut(s) 85, 91, 137
SspMI CTAG 1 cut(s) 107
TaaI ACNGT 1 cut(s) 329
TasI AATT 3 cut(s) 85, 91, 137
TseFI GTSAC 1 cut(s) 221
Tsp45I GTSAC 1 cut(s) 221
TspDTI ATGAA 1 cut(s) 85
XapI RAATTY 1 cut(s) 137
XceI RCATGY 1 cut(s) 156
XspI CTAG 1 cut(s) 107
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.