pycom12g23090

protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
N/A
Physical Location & Seq
Forward (+)
23765053 .. 23765823
771 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 771 bp
ATGGTGGATAGCCTGCCCCTTCTACCTGCGTTTTCCTTGCTAGTAATCGTCTTCTCCAGGGCGATTAATGTCGAAGCAGCAGTTTATGATCGTGCCGCTGACTGCCCGGTTTCAAACTGTAGCGACGCCGGCCCCCTCATCAAGTTTCCCTTCCGTCTCAAAGACCCACCCCTTCACTGTGGCCATCCAGAGTTTGAGGTTTCTTGCTTAAAAAGCAAGACAATGATTCAGCTCTCCTCATCATCAGGACTGTTTCCTATCCAAAGTGTCGATTACCGCAGCCGAACTCTCAGCGTCTACGATGATGAAGAGGGTTGCTTTCCAAAGCGCCTTCTTAATTTTACAATCTCCACCACCTCGCTCTTTGAACCAATACCTTCTCAGGAACCTATGCACGGGTACCCCCCTCCTCCAGTAGATTTCGATTTCGAGATGGACATCTACCGTTTCAACTATGCCGCCTATAACAATCGTCCTAGTGATCTTCCTTACGCATATTATCCTCACCCATATGGCATGCAATATCCCCAGTTGATGAACTTTACGCTCTTGAATTGTTCCACGACACAAAATTTGAACACGGAGAGCTTCTACATACCAATCACATGTCTTAGTGGCGGACATCATCAAGTTCTGGCTGTTCAGCCAACAGCTTCTGTCACTGAGGTGCCGTTCAGAACTTGCAGTACCTTGAAACAACTAGACCTTCCGCTACGAAGAGTGGATGATGGCAATAGTACTGGGTATCACTGTGAGCCGGACAATGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

257

Amino Acids

28.77

Weight (kDa)

5.04

Isoelectric Point (pI)

48.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 35 - 101 1.5e-15 Wall-associated receptor kinase galacturonan-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 34
Acc65I GGTACC 1 cut(s) 399
AccB1I GGYRCC 2 cut(s) 399, 667
AccI GTMKAC 1 cut(s) 297
AciI CCGC 5 cut(s) 96, 277, 459, 618, 710
AcoI YGGCCR 1 cut(s) 181
AcsI RAATTY 1 cut(s) 571
AcyI GRCGYC 1 cut(s) 126
AfaI GTAC 3 cut(s) 401, 688, 739
AfiI CCNNNNNNNGG 1 cut(s) 395
AflIII ACRYGT 1 cut(s) 605
AgsI TTSAA 6 cut(s) 114, 368, 451, 553, 577, 694
AjnI CCWGG 1 cut(s) 56
AleI CACNNNNGTG 1 cut(s) 665
AluBI AGCT 3 cut(s) 232, 588, 653
AluI AGCT 3 cut(s) 232, 588, 653
Alw26I GTCTC 1 cut(s) 161
AlwNI CAGNNNCTG 1 cut(s) 656
AoxI GGCC 2 cut(s) 130, 181
ApeKI GCWGC 2 cut(s) 77, 279
ApoI RAATTY 1 cut(s) 571
ArsI GACNNNNNNTTYG 2 cut(s) 556, 588
AseI ATTAAT 1 cut(s) 66
Asp718I GGTACC 1 cut(s) 399
AspLEI GCGC 1 cut(s) 330
AspS9I GGNCC 1 cut(s) 131
AsuC2I CCSGG 1 cut(s) 107
AsuHPI GGTGA 1 cut(s) 497
BalI TGGCCA 1 cut(s) 183
BanI GGYRCC 2 cut(s) 399, 667
BbsI GAAGAC 1 cut(s) 43
BbvI GCAGC 2 cut(s) 89, 291
BccI CCATC 3 cut(s) 192, 427, 722
BceAI ACGGC 1 cut(s) 655
BciT130I CCWGG 1 cut(s) 58
BcnI CCSGG 1 cut(s) 107
BcoDI GTCTC 1 cut(s) 161
BfaI CTAG 3 cut(s) 41, 477, 701
BfmI CTRYAG 1 cut(s) 118
BfoI RGCGCY 1 cut(s) 331
BfuAI ACCTGC 1 cut(s) 34
BisI GCNGC 4 cut(s) 78, 96, 280, 459
BlsI GCNGC 4 cut(s) 79, 97, 281, 460
BmcAI AGTACT 1 cut(s) 739
Bme1390I CCNGG 2 cut(s) 58, 107
BmgT120I GGNCC 1 cut(s) 131
BmiI GGNNCC 4 cut(s) 133, 387, 401, 669
BmrFI CCNGG 2 cut(s) 58, 107
BmrI ACTGGG 2 cut(s) 523, 750
BmuI ACTGGG 2 cut(s) 523, 750
BpiI GAAGAC 1 cut(s) 43
BpmI CTGGAG 2 cut(s) 40, 396
BpuMI CCSGG 1 cut(s) 107
BsaBI GATNNNNATC 1 cut(s) 437
BsaHI GRCGYC 1 cut(s) 126
BsaJI CCNNGG 1 cut(s) 57
Bsc4I CCNNNNNNNGG 1 cut(s) 395
Bse118I RCCGGY 1 cut(s) 128
Bse1I ACTGG 3 cut(s) 413, 529, 745
Bse8I GATNNNNATC 1 cut(s) 437
BseBI CCWGG 1 cut(s) 58
BseDI CCNNGG 1 cut(s) 57
BseGI GGATG 2 cut(s) 184, 730
BseJI GATNNNNATC 1 cut(s) 437
BseLI CCNNNNNNNGG 1 cut(s) 395
BseMII CTCAG 3 cut(s) 304, 395, 654
BseNI ACTGG 3 cut(s) 413, 529, 745
BseRI GAGGAG 2 cut(s) 226, 399
BseXI GCAGC 2 cut(s) 89, 291
BshFI GGCC 2 cut(s) 132, 183
BshNI GGYRCC 2 cut(s) 399, 667
BsiSI CCGG 3 cut(s) 107, 129, 758
BslI CCNNNNNNNGG 1 cut(s) 395
BsmAI GTCTC 1 cut(s) 161
BsmBI CGTCTC 1 cut(s) 161
BsnI GGCC 2 cut(s) 132, 183
Bsp143I GATC 2 cut(s) 88, 481
BspACI CCGC 5 cut(s) 96, 277, 459, 618, 710
BspANI GGCC 2 cut(s) 132, 183
BspCNI CTCAG 3 cut(s) 303, 394, 655
BspLI GGNNCC 4 cut(s) 133, 387, 401, 669
BspMI ACCTGC 1 cut(s) 34
BspT107I GGYRCC 2 cut(s) 399, 667
BsrFI RCCGGY 1 cut(s) 128
BsrI ACTGG 3 cut(s) 413, 529, 745
BssAI RCCGGY 1 cut(s) 128
BssECI CCNNGG 1 cut(s) 57
BssMI GATC 2 cut(s) 88, 481
BssNI GRCGYC 1 cut(s) 126
Bst2UI CCWGG 1 cut(s) 58
Bst4CI ACNGT 5 cut(s) 119, 179, 252, 446, 752
Bst6I CTCTTC 2 cut(s) 303, 712
BstACI GRCGYC 1 cut(s) 126
BstC8I GCNNGC 3 cut(s) 14, 130, 518
BstDEI CTNAG 4 cut(s) 290, 381, 611, 663
BstF5I GGATG 2 cut(s) 184, 730
BstH2I RGCGCY 1 cut(s) 331
BstHHI GCGC 1 cut(s) 330
BstKTI GATC 2 cut(s) 91, 484
BstMAI GTCTC 1 cut(s) 161
BstMBI GATC 2 cut(s) 88, 481
BstMWI GCNNNNNNNGC 2 cut(s) 129, 213
BstNI CCWGG 1 cut(s) 58
BstNSI RCATGY 2 cut(s) 520, 609
BstSCI CCNGG 2 cut(s) 56, 105
BstSFI CTRYAG 1 cut(s) 118
BstV1I GCAGC 2 cut(s) 89, 291
BstV2I GAAGAC 1 cut(s) 43
BsuRI GGCC 2 cut(s) 132, 183
BtsCI GGATG 2 cut(s) 184, 730
BtsIMutI CAGTG 3 cut(s) 175, 660, 748
BveI ACCTGC 1 cut(s) 34
Cac8I GCNNGC 3 cut(s) 14, 130, 518
CaiI CAGNNNCTG 1 cut(s) 656
CfoI GCGC 1 cut(s) 330
Cfr10I RCCGGY 1 cut(s) 128
Cfr13I GGNCC 1 cut(s) 131
CseI GACGC 2 cut(s) 134, 283
Csp6I GTAC 3 cut(s) 400, 687, 738
CviAII CATG 2 cut(s) 517, 606
CviQI GTAC 3 cut(s) 400, 687, 738
DdeI CTNAG 4 cut(s) 290, 381, 611, 663
DpnI GATC 2 cut(s) 90, 483
DpnII GATC 2 cut(s) 88, 481
EaeI YGGCCR 1 cut(s) 181
Eam1104I CTCTTC 2 cut(s) 303, 712
EarI CTCTTC 2 cut(s) 303, 712
EciI GGCGGA 1 cut(s) 633
EcoRII CCWGG 1 cut(s) 56
Esp3I CGTCTC 1 cut(s) 161
FaeI CATG 2 cut(s) 520, 609
FalI AAGNNNNNCTT 2 cut(s) 134, 166
FatI CATG 2 cut(s) 516, 605
FauNDI CATATG 1 cut(s) 511
FblI GTMKAC 1 cut(s) 297
Fnu4HI GCNGC 4 cut(s) 78, 96, 280, 459
FokI GGATG 2 cut(s) 171, 737
Fsp4HI GCNGC 4 cut(s) 78, 96, 280, 459
FspBI CTAG 3 cut(s) 41, 477, 701
GlaI GCGC 1 cut(s) 329
GluI GCNGC 4 cut(s) 78, 96, 280, 459
GsuI CTGGAG 2 cut(s) 40, 396
HaeII RGCGCY 1 cut(s) 331
HaeIII GGCC 2 cut(s) 132, 183
HapII CCGG 3 cut(s) 107, 129, 758
HgaI GACGC 2 cut(s) 134, 283
HhaI GCGC 1 cut(s) 330
Hin1I GRCGYC 1 cut(s) 126
Hin1II CATG 2 cut(s) 520, 609
Hin6I GCGC 1 cut(s) 328
HinP1I GCGC 1 cut(s) 328
HinfI GANTC 1 cut(s) 226
HpaII CCGG 3 cut(s) 107, 129, 758
HphI GGTGA 1 cut(s) 497
Hpy166II GTNNAC 1 cut(s) 298
Hpy188I TCNGA 1 cut(s) 677
Hpy188III TCNNGA 5 cut(s) 188, 246, 383, 430, 550
Hpy8I GTNNAC 1 cut(s) 298
Hpy99I CGWCG 1 cut(s) 128
HpyAV CCTTC 6 cut(s) 29, 160, 182, 341, 387, 716
HpyCH4III ACNGT 5 cut(s) 119, 179, 252, 446, 752
HpyCH4V TGCA 3 cut(s) 394, 520, 684
HpyF10VI GCNNNNNNNGC 2 cut(s) 129, 213
HpyF3I CTNAG 4 cut(s) 290, 381, 611, 663
Hsp92I GRCGYC 1 cut(s) 126
Hsp92II CATG 2 cut(s) 520, 609
HspAI GCGC 1 cut(s) 328
KpnI GGTACC 1 cut(s) 403
KroI GCCGGC 1 cut(s) 128
KroNI GCCGGC 1 cut(s) 130
Kzo9I GATC 2 cut(s) 88, 481
Lsp1109I GCAGC 2 cut(s) 89, 291
MaeI CTAG 3 cut(s) 41, 477, 701
MaeIII GTNAC 1 cut(s) 658
MalI GATC 2 cut(s) 90, 483
MboI GATC 2 cut(s) 88, 481
MboII GAAGA 4 cut(s) 43, 320, 476, 729
MlsI TGGCCA 1 cut(s) 183
MluCI AATT 3 cut(s) 337, 553, 571
MluNI TGGCCA 1 cut(s) 183
MnlI CCTC 9 cut(s) 146, 190, 247, 304, 367, 417, 420, 513, 658
Mox20I TGGCCA 1 cut(s) 183
MroNI GCCGGC 1 cut(s) 128
MscI TGGCCA 1 cut(s) 183
MseI TTAA 3 cut(s) 66, 209, 336
MslI CAYNNNNRTG 2 cut(s) 510, 665
Msp20I TGGCCA 1 cut(s) 183
MspA1I CMGCKG 1 cut(s) 98
MspI CCGG 3 cut(s) 107, 129, 758
MspR9I CCNGG 2 cut(s) 58, 107
MvaI CCWGG 1 cut(s) 58
MwoI GCNNNNNNNGC 2 cut(s) 129, 213
NaeI GCCGGC 1 cut(s) 130
NciI CCSGG 1 cut(s) 107
NdeI CATATG 1 cut(s) 511
NdeII GATC 2 cut(s) 88, 481
NgoMIV GCCGGC 1 cut(s) 128
NlaIII CATG 2 cut(s) 520, 609
NlaIV GGNNCC 4 cut(s) 133, 387, 401, 669
NmuCI GTSAC 1 cut(s) 658
NspI RCATGY 2 cut(s) 520, 609
OliI CACNNNNGTG 1 cut(s) 665
PaeI GCATGC 1 cut(s) 520
PciI ACATGT 1 cut(s) 605
PdiI GCCGGC 1 cut(s) 130
PfeI GAWTC 1 cut(s) 226
PkrI GCNGC 4 cut(s) 79, 97, 281, 460
PscI ACATGT 1 cut(s) 605
PshBI ATTAAT 1 cut(s) 66
Psp6I CCWGG 1 cut(s) 56
PspGI CCWGG 1 cut(s) 56
PspN4I GGNNCC 4 cut(s) 133, 387, 401, 669
PspPI GGNCC 1 cut(s) 131
PsrI GAACNNNNNNTAC 2 cut(s) 670, 702
PstNI CAGNNNCTG 1 cut(s) 656
RsaI GTAC 3 cut(s) 401, 688, 739
RsaNI GTAC 3 cut(s) 400, 687, 738
RseI CAYNNNNRTG 2 cut(s) 510, 665
SaqAI TTAA 3 cut(s) 66, 209, 336
SatI GCNGC 4 cut(s) 78, 96, 280, 459
Sau3AI GATC 2 cut(s) 88, 481
Sau96I GGNCC 1 cut(s) 131
ScaI AGTACT 1 cut(s) 739
ScrFI CCNGG 2 cut(s) 58, 107
SfcI CTRYAG 1 cut(s) 118
SmiMI CAYNNNNRTG 2 cut(s) 510, 665
SphI GCATGC 1 cut(s) 520
Sse9I AATT 3 cut(s) 337, 553, 571
SsiI CCGC 5 cut(s) 96, 277, 459, 618, 710
SspMI CTAG 3 cut(s) 41, 477, 701
StyD4I CCNGG 2 cut(s) 56, 105
TaaI ACNGT 5 cut(s) 119, 179, 252, 446, 752
TaqI TCGA 4 cut(s) 72, 270, 423, 429
TasI AATT 3 cut(s) 337, 553, 571
TatI WGTACW 1 cut(s) 737
TauI GCSGC 2 cut(s) 98, 461
TfiI GAWTC 1 cut(s) 226
Tru1I TTAA 3 cut(s) 66, 209, 336
Tru9I TTAA 3 cut(s) 66, 209, 336
TscAI CASTG 3 cut(s) 182, 667, 755
TseFI GTSAC 1 cut(s) 658
TseI GCWGC 2 cut(s) 77, 279
Tsp45I GTSAC 1 cut(s) 658
TspDTI ATGAA 2 cut(s) 321, 551
TspGWI ACGGA 2 cut(s) 143, 596
TspRI CASTG 3 cut(s) 182, 667, 755
VspI ATTAAT 1 cut(s) 66
XapI RAATTY 1 cut(s) 571
XceI RCATGY 2 cut(s) 520, 609
XmiI GTMKAC 1 cut(s) 297
XspI CTAG 3 cut(s) 41, 477, 701
ZrmI AGTACT 1 cut(s) 739
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.