pycom13g01430

transmembrane ascorbate ferrireductase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
N/A
Physical Location & Seq
Forward (+)
922642 .. 923083
442 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 288 bp
ATGTATTCCCTGCATTCATGGATTGGCTTGACCACCTTTATCTTGTACGGTTTGCAGTGGCTGTTTGGAGCTGCTACGTTCTTGTTTTCAAGAGGTATGTCAGAGTCGTCGAGGCTCAGAAGATCGATCTGTGCTGCCCTAACTGGTCTGATGGAGAAATTCACATTCCTTAGAATTTCGAATGTGCTGGGTCGCAGGGAATCACACTTGATCAATTTCACTGGACTATCAATCCTCCTGTTTGGCATCTTCGTCGATCTCTCTGTCGCTCTTGCCCGTTATGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

96

Amino Acids

10.77

Weight (kDa)

10.39

Isoelectric Point (pI)

53.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cytochrom_B561 PF03188 1 - 51 1.7e-09 Eukaryotic cytochrome b561
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 158, 174
AfaI GTAC 1 cut(s) 47
AgsI TTSAA 1 cut(s) 90
AluBI AGCT 1 cut(s) 71
AluI AGCT 1 cut(s) 71
AlwNI CAGNNNCTG 1 cut(s) 61
ApeKI GCWGC 2 cut(s) 71, 134
ApoI RAATTY 2 cut(s) 158, 174
AsuII TTCGAA 1 cut(s) 179
BbvI GCAGC 2 cut(s) 58, 121
BccI CCATC 1 cut(s) 145
BcgI CGANNNNNNTGC 2 cut(s) 235, 269
BclI TGATCA 1 cut(s) 210
BisI GCNGC 2 cut(s) 72, 135
BlsI GCNGC 2 cut(s) 73, 136
BmsI GCATC 1 cut(s) 255
Bpu14I TTCGAA 1 cut(s) 179
Bsa29I ATCGAT 1 cut(s) 125
Bse1I ACTGG 2 cut(s) 148, 226
BseCI ATCGAT 1 cut(s) 125
BseMII CTCAG 1 cut(s) 130
BseNI ACTGG 2 cut(s) 148, 226
BseXI GCAGC 2 cut(s) 58, 121
BseYI CCCAGC 1 cut(s) 187
BshVI ATCGAT 1 cut(s) 125
BsmI GAATGC 1 cut(s) 13
Bsp119I TTCGAA 1 cut(s) 179
Bsp143I GATC 4 cut(s) 122, 126, 210, 256
BspCNI CTCAG 1 cut(s) 129
BspDI ATCGAT 1 cut(s) 125
BspT104I TTCGAA 1 cut(s) 179
BsrI ACTGG 2 cut(s) 148, 226
BssMI GATC 4 cut(s) 122, 126, 210, 256
Bst4CI ACNGT 1 cut(s) 50
BstBI TTCGAA 1 cut(s) 179
BstDEI CTNAG 2 cut(s) 116, 170
BstKTI GATC 4 cut(s) 125, 129, 213, 259
BstMBI GATC 4 cut(s) 122, 126, 210, 256
BstV1I GCAGC 2 cut(s) 58, 121
Bsu15I ATCGAT 1 cut(s) 125
BsuTUI ATCGAT 1 cut(s) 125
BtsI GCAGTG 1 cut(s) 62
BtsIMutI CAGTG 2 cut(s) 62, 219
CaiI CAGNNNCTG 1 cut(s) 61
ClaI ATCGAT 1 cut(s) 125
Csp6I GTAC 1 cut(s) 46
CviAII CATG 1 cut(s) 18
CviJI RGCY 4 cut(s) 27, 61, 71, 115
CviKI_1 RGCY 4 cut(s) 27, 61, 71, 115
CviQI GTAC 1 cut(s) 46
DdeI CTNAG 2 cut(s) 116, 170
DpnI GATC 4 cut(s) 124, 128, 212, 258
DpnII GATC 4 cut(s) 122, 126, 210, 256
FaeI CATG 1 cut(s) 21
FaiI YATR 3 cut(s) 19, 98, 282
FatI CATG 1 cut(s) 17
FbaI TGATCA 1 cut(s) 210
Fnu4HI GCNGC 2 cut(s) 72, 135
Fsp4HI GCNGC 2 cut(s) 72, 135
GluI GCNGC 2 cut(s) 72, 135
GsaI CCCAGC 1 cut(s) 191
Hin1II CATG 1 cut(s) 21
HinfI GANTC 2 cut(s) 104, 200
Hpy188I TCNGA 3 cut(s) 103, 119, 150
Hpy188III TCNNGA 1 cut(s) 90
Hpy99I CGWCG 2 cut(s) 112, 257
HpyCH4III ACNGT 1 cut(s) 50
HpyCH4IV ACGT 1 cut(s) 77
HpyCH4V TGCA 2 cut(s) 13, 55
HpyF3I CTNAG 2 cut(s) 116, 170
HpySE526I ACGT 1 cut(s) 77
Hsp92II CATG 1 cut(s) 21
Ksp22I TGATCA 1 cut(s) 210
Kzo9I GATC 4 cut(s) 122, 126, 210, 256
LmnI GCTCC 1 cut(s) 68
LpnPI CCDG 6 cut(s) 23, 129, 173, 181, 207, 251
Lsp1109I GCAGC 2 cut(s) 58, 121
LweI GCATC 1 cut(s) 255
MaeII ACGT 1 cut(s) 77
MalI GATC 4 cut(s) 124, 128, 212, 258
MboI GATC 4 cut(s) 122, 126, 210, 256
MboII GAAGA 2 cut(s) 132, 241
MluCI AATT 3 cut(s) 158, 174, 214
MlyI GAGTC 1 cut(s) 113
MnlI CCTC 3 cut(s) 86, 105, 245
Mva1269I GAATGC 1 cut(s) 13
NdeII GATC 4 cut(s) 122, 126, 210, 256
NlaIII CATG 1 cut(s) 21
NspV TTCGAA 1 cut(s) 179
PctI GAATGC 1 cut(s) 13
PfeI GAWTC 1 cut(s) 200
PkrI GCNGC 2 cut(s) 73, 136
PleI GAGTC 1 cut(s) 112
PpsI GAGTC 1 cut(s) 112
PspFI CCCAGC 1 cut(s) 187
PstNI CAGNNNCTG 1 cut(s) 61
RsaI GTAC 1 cut(s) 47
RsaNI GTAC 1 cut(s) 46
SatI GCNGC 2 cut(s) 72, 135
Sau3AI GATC 4 cut(s) 122, 126, 210, 256
SchI GAGTC 1 cut(s) 113
SetI ASST 4 cut(s) 38, 73, 80, 97
SfaNI GCATC 1 cut(s) 255
SfuI TTCGAA 1 cut(s) 179
Sse9I AATT 3 cut(s) 158, 174, 214
TaaI ACNGT 1 cut(s) 50
TaiI ACGT 1 cut(s) 80
TaqI TCGA 4 cut(s) 110, 125, 179, 255
TasI AATT 3 cut(s) 158, 174, 214
TfiI GAWTC 1 cut(s) 200
TscAI CASTG 2 cut(s) 62, 226
TseI GCWGC 2 cut(s) 71, 134
TspDTI ATGAA 1 cut(s) 6
TspRI CASTG 2 cut(s) 62, 226
XapI RAATTY 2 cut(s) 158, 174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.