pycom13g03930

Carboxylesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
N/A
Physical Location & Seq
Reverse (-)
2603906 .. 2604335
430 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 363 bp
ATGGTGGGTGATAGTGCGGCTGCCAATATAGCCCATAATGCGGCCACGAGACTTTGTAATATTAATTCCCGACGCTCCGTACACCCTTTGATTGTTAAAGGTAAAATTTTGCTACAATCCTTATTTGGGAGGGAGACGAGGACCAGTTCGGAGAAGTACCATATGGTGAAGCAACCTCGGTCTCTGCTGAGCTTGGCAGCCTCCGATGCTTATTGGCGATTGGCGATGCCATGCGGCGCTAATCACCACCACCTATTTTGCAACCCTATGAAGAGTAGGAGGAGGAGTAGCAGTGCTAGTACTCTTAGGGGTGTTTGGCATGCCCTGGTTTGCATTTCAGAGATGGATTATATTGAAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

121

Amino Acids

13.46

Weight (kDa)

10.23

Isoelectric Point (pI)

71.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_3 PF07859 1 - 118 2.5e-11 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 17, 41, 234
AcoI YGGCCR 1 cut(s) 42
AcsI RAATTY 1 cut(s) 105
AfaI GTAC 3 cut(s) 81, 158, 301
AfiI CCNNNNNNNGG 2 cut(s) 40, 126
AgsI TTSAA 1 cut(s) 356
AjnI CCWGG 1 cut(s) 324
AluBI AGCT 1 cut(s) 192
AluI AGCT 1 cut(s) 192
Alw26I GTCTC 3 cut(s) 43, 128, 186
AoxI GGCC 1 cut(s) 42
ApeKI GCWGC 2 cut(s) 20, 197
ApoI RAATTY 1 cut(s) 105
AseI ATTAAT 1 cut(s) 63
AspLEI GCGC 1 cut(s) 239
AspS9I GGNCC 1 cut(s) 141
AsuHPI GGTGA 3 cut(s) 20, 178, 236
AvaII GGWCC 1 cut(s) 141
BauI CACGAG 1 cut(s) 46
BbvI GCAGC 2 cut(s) 7, 209
BccI CCATC 1 cut(s) 337
BciT130I CCWGG 1 cut(s) 326
BcoDI GTCTC 3 cut(s) 43, 128, 186
BfaI CTAG 1 cut(s) 297
BfoI RGCGCY 1 cut(s) 240
BisI GCNGC 5 cut(s) 18, 21, 42, 198, 235
BlpI GCTNAGC 1 cut(s) 188
BlsI GCNGC 5 cut(s) 19, 22, 43, 199, 236
BmcAI AGTACT 1 cut(s) 301
Bme1390I CCNGG 1 cut(s) 326
Bme18I GGWCC 1 cut(s) 141
BmgT120I GGNCC 1 cut(s) 141
BmrFI CCNGG 1 cut(s) 326
BmsI GCATC 2 cut(s) 196, 216
Bpu1102I GCTNAGC 1 cut(s) 188
BsaI GGTCTC 1 cut(s) 186
BsaJI CCNNGG 2 cut(s) 176, 324
BsaXI ACNNNNNCTCC 4 cut(s) 271, 277, 301, 307
Bsc4I CCNNNNNNNGG 2 cut(s) 40, 126
Bse1I ACTGG 1 cut(s) 144
BseBI CCWGG 1 cut(s) 326
BseDI CCNNGG 2 cut(s) 176, 324
BseLI CCNNNNNNNGG 2 cut(s) 40, 126
BseMII CTCAG 1 cut(s) 179
BseNI ACTGG 1 cut(s) 144
BseRI GAGGAG 2 cut(s) 295, 298
BseXI GCAGC 2 cut(s) 7, 209
BshFI GGCC 1 cut(s) 44
BslI CCNNNNNNNGG 2 cut(s) 40, 126
BsmAI GTCTC 3 cut(s) 43, 128, 186
BsmBI CGTCTC 1 cut(s) 128
BsnI GGCC 1 cut(s) 44
Bso31I GGTCTC 1 cut(s) 186
Bsp1720I GCTNAGC 1 cut(s) 188
BspACI CCGC 3 cut(s) 17, 41, 234
BspANI GGCC 1 cut(s) 44
BspCNI CTCAG 1 cut(s) 180
BspTNI GGTCTC 1 cut(s) 186
BsrI ACTGG 1 cut(s) 144
BssECI CCNNGG 2 cut(s) 176, 324
BssSI CACGAG 1 cut(s) 46
Bst2BI CACGAG 1 cut(s) 46
Bst2UI CCWGG 1 cut(s) 326
Bst6I CTCTTC 1 cut(s) 266
BstC8I GCNNGC 1 cut(s) 321
BstDEI CTNAG 2 cut(s) 188, 305
BstH2I RGCGCY 1 cut(s) 240
BstHHI GCGC 1 cut(s) 239
BstMAI GTCTC 3 cut(s) 43, 128, 186
BstMWI GCNNNNNNNGC 3 cut(s) 29, 38, 206
BstNI CCWGG 1 cut(s) 326
BstNSI RCATGY 1 cut(s) 323
BstSCI CCNGG 1 cut(s) 324
BstV1I GCAGC 2 cut(s) 7, 209
BsuRI GGCC 1 cut(s) 44
BtgZI GCGATG 1 cut(s) 239
BtsI GCAGTG 1 cut(s) 298
BtsIMutI CAGTG 1 cut(s) 298
Cac8I GCNNGC 1 cut(s) 321
CfoI GCGC 1 cut(s) 239
Cfr13I GGNCC 1 cut(s) 141
CseI GACGC 1 cut(s) 81
Csp6I GTAC 3 cut(s) 80, 157, 300
CspCI CAANNNNNGTGG 2 cut(s) 239, 274
CviAII CATG 2 cut(s) 231, 320
CviJI RGCY 5 cut(s) 20, 32, 44, 192, 200
CviKI_1 RGCY 5 cut(s) 20, 32, 44, 192, 200
CviQI GTAC 3 cut(s) 80, 157, 300
DdeI CTNAG 2 cut(s) 188, 305
EaeI YGGCCR 1 cut(s) 42
Eam1104I CTCTTC 1 cut(s) 266
EarI CTCTTC 1 cut(s) 266
Eco31I GGTCTC 1 cut(s) 186
Eco47I GGWCC 1 cut(s) 141
EcoRII CCWGG 1 cut(s) 324
Esp3I CGTCTC 1 cut(s) 128
FaeI CATG 2 cut(s) 234, 323
FaiI YATR 8 cut(s) 29, 36, 162, 164, 232, 269, 321, 351
FatI CATG 2 cut(s) 230, 319
FauNDI CATATG 1 cut(s) 162
Fnu4HI GCNGC 5 cut(s) 18, 21, 42, 198, 235
Fsp4HI GCNGC 5 cut(s) 18, 21, 42, 198, 235
FspBI CTAG 1 cut(s) 297
GlaI GCGC 1 cut(s) 238
GluI GCNGC 5 cut(s) 18, 21, 42, 198, 235
HaeII RGCGCY 1 cut(s) 240
HaeIII GGCC 1 cut(s) 44
HgaI GACGC 1 cut(s) 81
HhaI GCGC 1 cut(s) 239
Hin1II CATG 2 cut(s) 234, 323
Hin6I GCGC 1 cut(s) 237
HinP1I GCGC 1 cut(s) 237
HphI GGTGA 3 cut(s) 20, 178, 236
Hpy166II GTNNAC 1 cut(s) 82
Hpy188I TCNGA 3 cut(s) 151, 205, 340
Hpy188III TCNNGA 1 cut(s) 69
Hpy8I GTNNAC 1 cut(s) 82
Hpy99I CGWCG 1 cut(s) 75
HpyCH4V TGCA 2 cut(s) 261, 333
HpyF10VI GCNNNNNNNGC 3 cut(s) 29, 38, 206
HpyF3I CTNAG 2 cut(s) 188, 305
Hsp92II CATG 2 cut(s) 234, 323
HspAI GCGC 1 cut(s) 237
LmnI GCTCC 1 cut(s) 80
LpnPI CCDG 3 cut(s) 157, 311, 338
Lsp1109I GCAGC 2 cut(s) 7, 209
LweI GCATC 2 cut(s) 196, 216
MaeI CTAG 1 cut(s) 297
MboII GAAGA 1 cut(s) 283
MluCI AATT 2 cut(s) 64, 105
MnlI CCTC 6 cut(s) 123, 132, 186, 211, 273, 276
MseI TTAA 2 cut(s) 63, 96
MspR9I CCNGG 1 cut(s) 326
MvaI CCWGG 1 cut(s) 326
MwoI GCNNNNNNNGC 3 cut(s) 29, 38, 206
NdeI CATATG 1 cut(s) 162
NlaIII CATG 2 cut(s) 234, 323
NspI RCATGY 1 cut(s) 323
PaeI GCATGC 1 cut(s) 323
PkrI GCNGC 5 cut(s) 19, 22, 43, 199, 236
PshBI ATTAAT 1 cut(s) 63
Psp6I CCWGG 1 cut(s) 324
PspGI CCWGG 1 cut(s) 324
PspPI GGNCC 1 cut(s) 141
RsaI GTAC 3 cut(s) 81, 158, 301
RsaNI GTAC 3 cut(s) 80, 157, 300
SaqAI TTAA 2 cut(s) 63, 96
SatI GCNGC 5 cut(s) 18, 21, 42, 198, 235
Sau96I GGNCC 1 cut(s) 141
ScaI AGTACT 1 cut(s) 301
ScrFI CCNGG 1 cut(s) 326
SetI ASST 4 cut(s) 103, 178, 194, 255
SfaNI GCATC 2 cut(s) 196, 216
SinI GGWCC 1 cut(s) 141
SphI GCATGC 1 cut(s) 323
Sse9I AATT 2 cut(s) 64, 105
SsiI CCGC 3 cut(s) 17, 41, 234
SspI AATATT 1 cut(s) 61
SspMI CTAG 1 cut(s) 297
StyD4I CCNGG 1 cut(s) 324
TaqII GACCGA 1 cut(s) 168
TasI AATT 2 cut(s) 64, 105
TatI WGTACW 1 cut(s) 299
TauI GCSGC 3 cut(s) 20, 44, 237
Tru1I TTAA 2 cut(s) 63, 96
Tru9I TTAA 2 cut(s) 63, 96
TscAI CASTG 1 cut(s) 298
TseI GCWGC 2 cut(s) 20, 197
TspDTI ATGAA 1 cut(s) 284
TspGWI ACGGA 1 cut(s) 67
TspRI CASTG 1 cut(s) 298
VpaK11BI GGWCC 1 cut(s) 141
VspI ATTAAT 1 cut(s) 63
XapI RAATTY 1 cut(s) 105
XceI RCATGY 1 cut(s) 323
XspI CTAG 1 cut(s) 297
ZrmI AGTACT 1 cut(s) 301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.