pycom13g07480

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
N/A
Physical Location & Seq
Forward (+)
4969891 .. 4970115
225 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 225 bp
ATGGTAAGAGAATCGGAACGCAGTAAACTGCCCGGTGAAATCATCTACTCGGCGAAAGAAAAGGGTTGGTTTCCGACATGGTGCAACCCAGCACTGGCACATGGAGCAGTTGGGTGCTTTGTGACTCATTGCGGGGGGAATTCGATAGCCTTGGGGTGCCTATGGCGGCTGTGCCTCAGTGGGCTGATCAGCTGTTTGTGGAGGAGATATGGGAGGTTGGCGTGA
Functional Annotation

Protein Analysis

75

Amino Acids

8.2

Weight (kDa)

9.12

Isoelectric Point (pI)

46.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 156
AciI CCGC 2 cut(s) 132, 166
AcsI RAATTY 1 cut(s) 139
AfiI CCNNNNNNNGG 1 cut(s) 94
AluBI AGCT 1 cut(s) 192
AluI AGCT 1 cut(s) 192
ApoI RAATTY 1 cut(s) 139
AsuC2I CCSGG 1 cut(s) 33
AsuHPI GGTGA 1 cut(s) 47
BanI GGYRCC 1 cut(s) 156
BclI TGATCA 1 cut(s) 186
BcnI CCSGG 1 cut(s) 33
BisI GCNGC 1 cut(s) 167
BlsI GCNGC 1 cut(s) 168
Bme1390I CCNGG 1 cut(s) 33
BmiI GGNNCC 1 cut(s) 158
BmrFI CCNGG 1 cut(s) 33
BpuMI CCSGG 1 cut(s) 33
BsaJI CCNNGG 1 cut(s) 150
Bsc4I CCNNNNNNNGG 1 cut(s) 94
Bse1I ACTGG 1 cut(s) 99
Bse3DI GCAATG 1 cut(s) 127
BseDI CCNNGG 1 cut(s) 150
BseLI CCNNNNNNNGG 1 cut(s) 94
BseMI GCAATG 1 cut(s) 127
BseMII CTCAG 1 cut(s) 190
BseNI ACTGG 1 cut(s) 99
BseRI GAGGAG 1 cut(s) 217
BseYI CCCAGC 1 cut(s) 88
BshNI GGYRCC 1 cut(s) 156
BsiSI CCGG 1 cut(s) 33
BslI CCNNNNNNNGG 1 cut(s) 94
Bsp143I GATC 1 cut(s) 186
BspACI CCGC 2 cut(s) 132, 166
BspCNI CTCAG 1 cut(s) 189
BspLI GGNNCC 1 cut(s) 158
BspT107I GGYRCC 1 cut(s) 156
BsrDI GCAATG 1 cut(s) 127
BsrI ACTGG 1 cut(s) 99
BssECI CCNNGG 1 cut(s) 150
BssMI GATC 1 cut(s) 186
BssT1I CCWWGG 1 cut(s) 150
BstDEI CTNAG 1 cut(s) 176
BstKTI GATC 1 cut(s) 189
BstMBI GATC 1 cut(s) 186
BstMWI GCNNNNNNNGC 1 cut(s) 104
BstSCI CCNGG 1 cut(s) 31
BtsIMutI CAGTG 2 cut(s) 92, 184
CviAII CATG 2 cut(s) 78, 101
CviJI RGCY 4 cut(s) 149, 169, 184, 192
CviKI_1 RGCY 4 cut(s) 149, 169, 184, 192
DdeI CTNAG 1 cut(s) 176
DpnI GATC 1 cut(s) 188
DpnII GATC 1 cut(s) 186
Eco130I CCWWGG 1 cut(s) 150
EcoRI GAATTC 1 cut(s) 139
EcoT14I CCWWGG 1 cut(s) 150
ErhI CCWWGG 1 cut(s) 150
FaeI CATG 2 cut(s) 81, 104
FaiI YATR 4 cut(s) 79, 102, 163, 210
FatI CATG 2 cut(s) 77, 100
FauI CCCGC 1 cut(s) 125
FbaI TGATCA 1 cut(s) 186
Fnu4HI GCNGC 1 cut(s) 167
Fsp4HI GCNGC 1 cut(s) 167
GluI GCNGC 1 cut(s) 167
GsaI CCCAGC 1 cut(s) 92
HapII CCGG 1 cut(s) 33
Hin1II CATG 2 cut(s) 81, 104
HinfI GANTC 2 cut(s) 11, 124
HpaII CCGG 1 cut(s) 33
HphI GGTGA 1 cut(s) 47
Hpy166II GTNNAC 1 cut(s) 26
Hpy188I TCNGA 2 cut(s) 16, 75
Hpy8I GTNNAC 1 cut(s) 26
HpyCH4V TGCA 1 cut(s) 84
HpyF10VI GCNNNNNNNGC 1 cut(s) 104
HpyF3I CTNAG 1 cut(s) 176
Hsp92II CATG 2 cut(s) 81, 104
Ksp22I TGATCA 1 cut(s) 186
Kzo9I GATC 1 cut(s) 186
LmnI GCTCC 1 cut(s) 104
LpnPI CCDG 3 cut(s) 46, 80, 102
MaeIII GTNAC 1 cut(s) 121
MalI GATC 1 cut(s) 188
MboI GATC 1 cut(s) 186
MluCI AATT 1 cut(s) 139
MlyI GAGTC 1 cut(s) 118
MmeI TCCRAC 1 cut(s) 98
MnlI CCTC 3 cut(s) 185, 195, 207
MspA1I CMGCKG 1 cut(s) 192
MspI CCGG 1 cut(s) 33
MspR9I CCNGG 1 cut(s) 33
MwoI GCNNNNNNNGC 1 cut(s) 104
NciI CCSGG 1 cut(s) 33
NdeII GATC 1 cut(s) 186
NlaIII CATG 2 cut(s) 81, 104
NlaIV GGNNCC 1 cut(s) 158
NmeAIII GCCGAG 1 cut(s) 29
NmuCI GTSAC 1 cut(s) 121
PfeI GAWTC 1 cut(s) 11
PkrI GCNGC 1 cut(s) 168
PleI GAGTC 1 cut(s) 118
PpsI GAGTC 1 cut(s) 118
PspFI CCCAGC 1 cut(s) 88
PspN4I GGNNCC 1 cut(s) 158
PvuII CAGCTG 1 cut(s) 192
SatI GCNGC 1 cut(s) 167
Sau3AI GATC 1 cut(s) 186
SchI GAGTC 1 cut(s) 118
ScrFI CCNGG 1 cut(s) 33
SetI ASST 2 cut(s) 194, 218
SgeI CNNG 9 cut(s) 44, 45, 61, 90, 101, 107, 113, 145, 163
Sse9I AATT 1 cut(s) 139
SsiI CCGC 2 cut(s) 132, 166
StyD4I CCNGG 1 cut(s) 31
StyI CCWWGG 1 cut(s) 150
TaqI TCGA 1 cut(s) 143
TasI AATT 1 cut(s) 139
TauI GCSGC 1 cut(s) 169
TfiI GAWTC 1 cut(s) 11
TscAI CASTG 2 cut(s) 99, 184
TseFI GTSAC 1 cut(s) 121
Tsp45I GTSAC 1 cut(s) 121
TspRI CASTG 2 cut(s) 99, 184
XapI RAATTY 1 cut(s) 139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.