pycom13g23570

Putative serine esterase (DUF676)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
N/A
Physical Location & Seq
Forward (+)
21063049 .. 21064088
1040 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 216 bp
ATGAAAGCTTCTTCATCTGCTCATGACGTAAAAATAGACTTGGAAGAGGAGATGATTAGAGGTCTTACTCAGATACCTTGGGAACGTGTGGATGTCAGCTTTCAAAAAAGTACACAACGATACATCGCTCATAATACCATTCAGGTGAAGAGCTATTGGTTGAATTCTGATGGTGCGGATGTGGTTTTCCATATCATAGATTACTTCCTTCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

72

Amino Acids

8.29

Weight (kDa)

5.41

Isoelectric Point (pI)

17.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 176
AcsI RAATTY 1 cut(s) 163
AfaI GTAC 1 cut(s) 112
AflIII ACRYGT 1 cut(s) 85
AgsI TTSAA 2 cut(s) 104, 163
AluBI AGCT 3 cut(s) 8, 99, 153
AluI AGCT 3 cut(s) 8, 99, 153
ApoI RAATTY 1 cut(s) 163
AsuHPI GGTGA 1 cut(s) 157
BccI CCATC 1 cut(s) 164
BsaJI CCNNGG 1 cut(s) 77
BseDI CCNNGG 1 cut(s) 77
BseGI GGATG 2 cut(s) 97, 184
BseMII CTCAG 1 cut(s) 83
BseRI GAGGAG 1 cut(s) 62
BspACI CCGC 1 cut(s) 176
BspCNI CTCAG 1 cut(s) 82
BspHI TCATGA 1 cut(s) 22
BspQI GCTCTTC 1 cut(s) 143
BssECI CCNNGG 1 cut(s) 77
BssT1I CCWWGG 1 cut(s) 77
Bst6I CTCTTC 2 cut(s) 39, 143
BstDEI CTNAG 1 cut(s) 69
BstF5I GGATG 2 cut(s) 97, 184
BtgZI GCGATG 1 cut(s) 109
BtsCI GGATG 2 cut(s) 97, 184
CciI TCATGA 1 cut(s) 22
Csp6I GTAC 1 cut(s) 111
CviAII CATG 1 cut(s) 23
CviJI RGCY 3 cut(s) 8, 99, 153
CviKI_1 RGCY 3 cut(s) 8, 99, 153
CviQI GTAC 1 cut(s) 111
DdeI CTNAG 1 cut(s) 69
Eam1104I CTCTTC 2 cut(s) 39, 143
EarI CTCTTC 2 cut(s) 39, 143
Eco130I CCWWGG 1 cut(s) 77
EcoRI GAATTC 1 cut(s) 163
EcoT14I CCWWGG 1 cut(s) 77
ErhI CCWWGG 1 cut(s) 77
FaeI CATG 1 cut(s) 26
FaiI YATR 4 cut(s) 24, 132, 192, 197
FatI CATG 1 cut(s) 22
FokI GGATG 2 cut(s) 104, 191
Hin1II CATG 1 cut(s) 26
HindIII AAGCTT 1 cut(s) 6
HphI GGTGA 1 cut(s) 157
Hpy166II GTNNAC 1 cut(s) 113
Hpy188I TCNGA 2 cut(s) 72, 169
Hpy188III TCNNGA 1 cut(s) 23
Hpy8I GTNNAC 1 cut(s) 113
HpyCH4IV ACGT 2 cut(s) 27, 85
HpyF3I CTNAG 1 cut(s) 69
HpySE526I ACGT 2 cut(s) 27, 85
Hsp92II CATG 1 cut(s) 26
LguI GCTCTTC 1 cut(s) 143
LpnPI CCDG 1 cut(s) 128
MaeII ACGT 2 cut(s) 27, 85
MboII GAAGA 3 cut(s) 3, 56, 160
MluCI AATT 1 cut(s) 163
MnlI CCTC 2 cut(s) 40, 53
MslI CAYNNNNRTG 1 cut(s) 143
NlaIII CATG 1 cut(s) 26
PagI TCATGA 1 cut(s) 22
PciSI GCTCTTC 1 cut(s) 143
RsaI GTAC 1 cut(s) 112
RsaNI GTAC 1 cut(s) 111
RseI CAYNNNNRTG 1 cut(s) 143
SapI GCTCTTC 1 cut(s) 143
SetI ASST 8 cut(s) 10, 30, 64, 79, 88, 101, 147, 155
SgeI CNNG 5 cut(s) 35, 52, 90, 98, 155
SmiMI CAYNNNNRTG 1 cut(s) 143
Sse9I AATT 1 cut(s) 163
SsiI CCGC 1 cut(s) 176
StyI CCWWGG 1 cut(s) 77
TaiI ACGT 2 cut(s) 30, 88
TasI AATT 1 cut(s) 163
TatI WGTACW 1 cut(s) 110
TspDTI ATGAA 1 cut(s) 17
XapI RAATTY 1 cut(s) 163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.