pycom13g28150

Release factor glutamine

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
N/A
Physical Location & Seq
Forward (+)
24120247 .. 24120788
542 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 447 bp
ATGAACTTGTTTTTCACAAATCTTCCTTCATTCAAAGGGGGTGCTAAGATGGAGCTGCCATTGATGAATTACTTTTTGCTGGTTTCGAGCTCGGGGGTTGTATGCTTGATGATTGTTAGTGATGGGGTTATTGGTCCAGAGAGTAATGGTGGACCTGCCATTATTTTGGGAAATTATCAGCAGCAGAGAATAATGCCGGACTCAACCTTTTTGCGTAGAGAGCTCAAATGGCTTATGGAAGACTTAATCAAAGAACCCAAAAACGTCAATAACAACGACAGAAGCGTTAGGATAAGGGTGGAAATTGAGGAGCTTTATATGTTTGTTGGGTGCGAGCATTGGAAGGACTTGGTGTTGTGTGTTGAAGGAAGGGTTTTGATTCTGAGGCCAAAGACGGAGCTCATTGTTGATTTGGTGGGGATGTGGTTTTGGGGAATGAAGGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

149

Amino Acids

16.94

Weight (kDa)

5.86

Isoelectric Point (pI)

47.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 163
AgsI TTSAA 2 cut(s) 34, 365
AluBI AGCT 5 cut(s) 55, 90, 223, 313, 400
AluI AGCT 5 cut(s) 55, 90, 223, 313, 400
Alw21I GWGCWC 3 cut(s) 92, 225, 402
Ama87I CYCGRG 1 cut(s) 91
AoxI GGCC 1 cut(s) 386
ApeKI GCWGC 2 cut(s) 55, 181
AspS9I GGNCC 2 cut(s) 134, 152
AvaI CYCGRG 1 cut(s) 91
AvaII GGWCC 2 cut(s) 134, 152
BanII GRGCYC 3 cut(s) 92, 225, 402
BbsI GAAGAC 1 cut(s) 246
Bbv12I GWGCWC 3 cut(s) 92, 225, 402
BbvI GCAGC 2 cut(s) 42, 193
BccI CCATC 2 cut(s) 43, 116
BfuAI ACCTGC 1 cut(s) 163
BisI GCNGC 2 cut(s) 56, 182
BlsI GCNGC 2 cut(s) 57, 183
Bme18I GGWCC 2 cut(s) 134, 152
BmeT110I CYCGRG 1 cut(s) 91
BmgT120I GGNCC 2 cut(s) 134, 152
BpiI GAAGAC 1 cut(s) 246
BseGI GGATG 1 cut(s) 426
BseMII CTCAG 1 cut(s) 374
BseRI GAGGAG 1 cut(s) 323
BseXI GCAGC 2 cut(s) 42, 193
BshFI GGCC 1 cut(s) 388
BsiHKAI GWGCWC 3 cut(s) 92, 225, 402
BsiHKCI CYCGRG 1 cut(s) 91
BsiSI CCGG 1 cut(s) 197
BsnI GGCC 1 cut(s) 388
BsoBI CYCGRG 1 cut(s) 91
Bsp1286I GDGCHC 3 cut(s) 92, 225, 402
BspANI GGCC 1 cut(s) 388
BspCNI CTCAG 1 cut(s) 375
BspMI ACCTGC 1 cut(s) 163
BstC8I GCNNGC 1 cut(s) 335
BstDEI CTNAG 2 cut(s) 45, 383
BstF5I GGATG 1 cut(s) 426
BstMWI GCNNNNNNNGC 2 cut(s) 220, 229
BstV1I GCAGC 2 cut(s) 42, 193
BstV2I GAAGAC 1 cut(s) 246
BstXI CCANNNNNNTGG 1 cut(s) 166
BsuRI GGCC 1 cut(s) 388
BtsCI GGATG 1 cut(s) 426
BveI ACCTGC 1 cut(s) 163
Cac8I GCNNGC 1 cut(s) 335
Cfr13I GGNCC 2 cut(s) 134, 152
CviJI RGCY 7 cut(s) 55, 90, 223, 232, 313, 388, 400
CviKI_1 RGCY 7 cut(s) 55, 90, 223, 232, 313, 388, 400
DdeI CTNAG 2 cut(s) 45, 383
Ecl136II GAGCTC 3 cut(s) 90, 223, 400
Eco24I GRGCYC 3 cut(s) 92, 225, 402
Eco47I GGWCC 2 cut(s) 134, 152
Eco53kI GAGCTC 3 cut(s) 90, 223, 400
Eco88I CYCGRG 1 cut(s) 91
EcoICRI GAGCTC 3 cut(s) 90, 223, 400
EcoT38I GRGCYC 3 cut(s) 92, 225, 402
FaiI YATR 4 cut(s) 103, 236, 318, 320
Fnu4HI GCNGC 2 cut(s) 56, 182
FokI GGATG 1 cut(s) 433
FriOI GRGCYC 3 cut(s) 92, 225, 402
Fsp4HI GCNGC 2 cut(s) 56, 182
GluI GCNGC 2 cut(s) 56, 182
HaeIII GGCC 1 cut(s) 388
HapII CCGG 1 cut(s) 197
HinfI GANTC 2 cut(s) 200, 379
HpaII CCGG 1 cut(s) 197
Hpy166II GTNNAC 1 cut(s) 152
Hpy188I TCNGA 1 cut(s) 384
Hpy188III TCNNGA 1 cut(s) 137
Hpy8I GTNNAC 1 cut(s) 152
HpyAV CCTTC 5 cut(s) 36, 337, 359, 363, 433
HpyCH4IV ACGT 1 cut(s) 264
HpyF10VI GCNNNNNNNGC 2 cut(s) 220, 229
HpyF3I CTNAG 2 cut(s) 45, 383
HpySE526I ACGT 1 cut(s) 264
LmnI GCTCC 3 cut(s) 52, 310, 397
LpnPI CCDG 4 cut(s) 65, 150, 168, 210
Lsp1109I GCAGC 2 cut(s) 42, 193
MaeII ACGT 1 cut(s) 264
MboII GAAGA 2 cut(s) 14, 251
MhlI GDGCHC 3 cut(s) 92, 225, 402
MluCI AATT 3 cut(s) 67, 172, 303
MlyI GAGTC 1 cut(s) 194
MnlI CCTC 2 cut(s) 301, 378
MseI TTAA 1 cut(s) 245
MspI CCGG 1 cut(s) 197
MwoI GCNNNNNNNGC 2 cut(s) 220, 229
PcsI WCGNNNNNNNCGW 1 cut(s) 282
PfeI GAWTC 1 cut(s) 379
PkrI GCNGC 2 cut(s) 57, 183
PleI GAGTC 1 cut(s) 194
PpsI GAGTC 1 cut(s) 194
Psp124BI GAGCTC 3 cut(s) 92, 225, 402
PspPI GGNCC 2 cut(s) 134, 152
SacI GAGCTC 3 cut(s) 92, 225, 402
SaqAI TTAA 1 cut(s) 245
SatI GCNGC 2 cut(s) 56, 182
Sau96I GGNCC 2 cut(s) 134, 152
SchI GAGTC 1 cut(s) 194
SduI GDGCHC 3 cut(s) 92, 225, 402
SetI ASST 8 cut(s) 57, 92, 157, 209, 225, 267, 315, 402
SinI GGWCC 2 cut(s) 134, 152
Sse9I AATT 3 cut(s) 67, 172, 303
SstI GAGCTC 3 cut(s) 92, 225, 402
TaiI ACGT 1 cut(s) 267
TaqI TCGA 1 cut(s) 86
TasI AATT 3 cut(s) 67, 172, 303
TfiI GAWTC 1 cut(s) 379
Tru1I TTAA 1 cut(s) 245
Tru9I TTAA 1 cut(s) 245
TseI GCWGC 2 cut(s) 55, 181
TspDTI ATGAA 3 cut(s) 17, 18, 80
TspGWI ACGGA 1 cut(s) 410
VpaK11BI GGWCC 2 cut(s) 134, 152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.