pycom14g01280

Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
N/A
Physical Location & Seq
Forward (+)
904286 .. 904486
201 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 201 bp
ATGGAGGAAGAAGACCAACAAAAAGTTGTAGATCTGATCAAAGAGCTCGTCATCCGCCTCCTCTCCCAAAACCCCATTTTCGAATCTCACCCACCGACTCCAAACTCCCCAGAATTTCAAAGCTCGCTCCTTTACGCTTTCCGCTTGATCTCCAACCGATTAACTCCCTTTGTGGCTCCCGATGCAGCCGACATAACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

67

Amino Acids

7.51

Weight (kDa)

4.49

Isoelectric Point (pI)

54.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 55, 142
AcsI RAATTY 1 cut(s) 113
AgsI TTSAA 1 cut(s) 119
AluBI AGCT 2 cut(s) 46, 123
AluI AGCT 2 cut(s) 46, 123
Alw21I GWGCWC 1 cut(s) 48
ApeKI GCWGC 1 cut(s) 185
ApoI RAATTY 1 cut(s) 113
ArsI GACNNNNNNTTYG 2 cut(s) 33, 65
AsuHPI GGTGA 1 cut(s) 80
AsuII TTCGAA 1 cut(s) 81
BanII GRGCYC 1 cut(s) 48
BbsI GAAGAC 1 cut(s) 18
Bbv12I GWGCWC 1 cut(s) 48
BbvI GCAGC 1 cut(s) 197
BclI TGATCA 1 cut(s) 36
BfaI CTAG 1 cut(s) 199
BglII AGATCT 1 cut(s) 31
BisI GCNGC 1 cut(s) 186
BlsI GCNGC 1 cut(s) 187
BmiI GGNNCC 1 cut(s) 177
BmsI GCATC 1 cut(s) 172
BpiI GAAGAC 1 cut(s) 18
Bpu14I TTCGAA 1 cut(s) 81
BseGI GGATG 1 cut(s) 51
BseRI GAGGAG 1 cut(s) 50
BseXI GCAGC 1 cut(s) 197
BsiHKAI GWGCWC 1 cut(s) 48
Bsp119I TTCGAA 1 cut(s) 81
Bsp1286I GDGCHC 1 cut(s) 48
Bsp143I GATC 3 cut(s) 31, 36, 147
BspACI CCGC 2 cut(s) 55, 142
BspLI GGNNCC 1 cut(s) 177
BspT104I TTCGAA 1 cut(s) 81
BssMI GATC 3 cut(s) 31, 36, 147
BstBI TTCGAA 1 cut(s) 81
BstC8I GCNNGC 1 cut(s) 125
BstF5I GGATG 1 cut(s) 51
BstKTI GATC 3 cut(s) 34, 39, 150
BstMBI GATC 3 cut(s) 31, 36, 147
BstMWI GCNNNNNNNGC 1 cut(s) 182
BstV1I GCAGC 1 cut(s) 197
BstV2I GAAGAC 1 cut(s) 18
BstX2I RGATCY 1 cut(s) 31
BstYI RGATCY 1 cut(s) 31
BtsCI GGATG 1 cut(s) 51
Cac8I GCNNGC 1 cut(s) 125
CviJI RGCY 4 cut(s) 46, 123, 176, 188
CviKI_1 RGCY 4 cut(s) 46, 123, 176, 188
DpnI GATC 3 cut(s) 33, 38, 149
DpnII GATC 3 cut(s) 31, 36, 147
EciI GGCGGA 1 cut(s) 44
Ecl136II GAGCTC 1 cut(s) 46
Eco24I GRGCYC 1 cut(s) 48
Eco53kI GAGCTC 1 cut(s) 46
EcoICRI GAGCTC 1 cut(s) 46
EcoT38I GRGCYC 1 cut(s) 48
FaiI YATR 1 cut(s) 194
FbaI TGATCA 1 cut(s) 36
Fnu4HI GCNGC 1 cut(s) 186
FokI GGATG 1 cut(s) 38
FriOI GRGCYC 1 cut(s) 48
Fsp4HI GCNGC 1 cut(s) 186
FspBI CTAG 1 cut(s) 199
GluI GCNGC 1 cut(s) 186
HinfI GANTC 2 cut(s) 83, 97
HphI GGTGA 1 cut(s) 80
Hpy188I TCNGA 1 cut(s) 36
Hpy188III TCNNGA 1 cut(s) 179
HpyCH4V TGCA 1 cut(s) 185
HpyF10VI GCNNNNNNNGC 1 cut(s) 182
Ksp22I TGATCA 1 cut(s) 36
Kzo9I GATC 3 cut(s) 31, 36, 147
LmnI GCTCC 2 cut(s) 132, 181
LpnPI CCDG 1 cut(s) 123
Lsp1109I GCAGC 1 cut(s) 197
LweI GCATC 1 cut(s) 172
MaeI CTAG 1 cut(s) 199
MalI GATC 3 cut(s) 33, 38, 149
MboI GATC 3 cut(s) 31, 36, 147
MboII GAAGA 2 cut(s) 20, 23
MflI RGATCY 1 cut(s) 31
MhlI GDGCHC 1 cut(s) 48
MluCI AATT 1 cut(s) 113
MlyI GAGTC 1 cut(s) 91
MmeI TCCRAC 1 cut(s) 177
MnlI CCTC 2 cut(s) 68, 71
MseI TTAA 1 cut(s) 161
MwoI GCNNNNNNNGC 1 cut(s) 182
NdeII GATC 3 cut(s) 31, 36, 147
NlaIV GGNNCC 1 cut(s) 177
NspV TTCGAA 1 cut(s) 81
PfeI GAWTC 1 cut(s) 83
PkrI GCNGC 1 cut(s) 187
PleI GAGTC 1 cut(s) 91
PpsI GAGTC 1 cut(s) 91
Psp124BI GAGCTC 1 cut(s) 48
PspN4I GGNNCC 1 cut(s) 177
PsuI RGATCY 1 cut(s) 31
SacI GAGCTC 1 cut(s) 48
SaqAI TTAA 1 cut(s) 161
SatI GCNGC 1 cut(s) 186
Sau3AI GATC 3 cut(s) 31, 36, 147
SchI GAGTC 1 cut(s) 91
SduI GDGCHC 1 cut(s) 48
SetI ASST 3 cut(s) 48, 125, 200
SfaNI GCATC 1 cut(s) 172
SfuI TTCGAA 1 cut(s) 81
SgeI CNNG 5 cut(s) 59, 122, 136, 157, 191
Sse9I AATT 1 cut(s) 113
SsiI CCGC 2 cut(s) 55, 142
SspMI CTAG 1 cut(s) 199
SstI GAGCTC 1 cut(s) 48
TaqI TCGA 1 cut(s) 81
TasI AATT 1 cut(s) 113
TfiI GAWTC 1 cut(s) 83
Tru1I TTAA 1 cut(s) 161
Tru9I TTAA 1 cut(s) 161
TseI GCWGC 1 cut(s) 185
XapI RAATTY 1 cut(s) 113
XspI CTAG 1 cut(s) 199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.