Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

1216144 .. 1217164

Gene Structure 1021 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 732 bp

ATGTTGCAGATGGCAGTGTTGGTGGCACTGGCAAGCCAAGATGCTTATCCACAGTTATCTCACGAACTCTACTGGAACTCGGTCCTGCCAAACGCACATATGCCAAAAGCTATCAGCCAACTTCTCCAACCTGACTTCAAGATTAACGAAGATATGAGAATTGCTGTCGAACTAGGGAAGGGTACCAGTTTTGACCTCATTGCAGGAGAAGAAAACCCTAGACTTGCTGGAGGCACAAATGTCGATCTTGTTGAAAAAGATGGGACGAAACCTACATATGTTGGATTAGCACAAGAACGATCCCTCTTTCTTTACCGTAGTAATCGTGCACTTGAAGGATCCGCCTTTGCTTACGGTAGTAATCATGCACATGAACGATCCGCCTTTGCTTACGGTAGTAATCATGCACATGCCACTCATGAGAATCATCAACTCCATAAAGATGACAACCCACAGGCAACTCTGTTCTTCTTGGACAAGGACATGCATCCTGGCACAACAATGAACTTGAACATCACTAGAAATTCGAATACGGCGAATTTTCTGCTGCGCAAAACCGCAGAGTCGATCCCTTTCTCGTCGAATGAATTACCTGAAATTTTCAACCAATTTTCAGTGAAATCGGAATTTGTGGAAGCCAATATAATTAAGCAAACAATTGAAGAGTGCGAAGCTCCAGGGATAGGAGGGAGAGGAAAAATATTGTGCCACCTCGTTAGAGTCAATGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0012505 GO:0031410 GO:0031982 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BURP

Protein Analysis

244

Amino Acids

26.99

Weight (kDa)

5.75

Isoelectric Point (pI)

40.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BURP	PF03181	155 - 233	6.9e-19	BURP domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	551
Acc65I	GGTACC	1 cut(s)	182
AccB1I	GGYRCC	1 cut(s)	182
AciI	CCGC	3 cut(s)	342, 381, 558
AclWI	GGATC	5 cut(s)	294, 333, 346, 372, 562
AcsI	RAATTY	4 cut(s)	523, 538, 597, 626
AfaI	GTAC	1 cut(s)	184
AfiI	CCNNNNNNNGG	1 cut(s)	683
AgsI	TTSAA	6 cut(s)	139, 254, 335, 511, 604, 662
AjnI	CCWGG	2 cut(s)	490, 676
AluBI	AGCT	2 cut(s)	110, 674
AluI	AGCT	2 cut(s)	110, 674
Alw21I	GWGCWC	1 cut(s)	331
Alw44I	GTGCAC	1 cut(s)	327
AlwI	GGATC	5 cut(s)	294, 333, 346, 372, 562
ApaLI	GTGCAC	1 cut(s)	327
ApeKI	GCWGC	1 cut(s)	547
ApoI	RAATTY	4 cut(s)	523, 538, 597, 626
Asp718I	GGTACC	1 cut(s)	182
AspLEI	GCGC	1 cut(s)	552
AspS9I	GGNCC	1 cut(s)	82
AsuII	TTCGAA	1 cut(s)	527
AvaII	GGWCC	1 cut(s)	82
BaeGI	GKGCMC	1 cut(s)	331
BamHI	GGATCC	1 cut(s)	338
BanI	GGYRCC	1 cut(s)	182
Bbv12I	GWGCWC	1 cut(s)	331
BbvI	GCAGC	1 cut(s)	534
BccI	CCATC	2 cut(s)	4, 254
BceAI	ACGGC	1 cut(s)	549
BcgI	CGANNNNNNTGC	4 cut(s)	223, 257, 526, 560
BciT130I	CCWGG	2 cut(s)	492, 678
BfaI	CTAG	3 cut(s)	173, 219, 519
BisI	GCNGC	1 cut(s)	548
BlsI	GCNGC	1 cut(s)	549
Bme1390I	CCNGG	2 cut(s)	492, 678
Bme18I	GGWCC	1 cut(s)	82
BmgT120I	GGNCC	1 cut(s)	82
BmiI	GGNNCC	2 cut(s)	184, 340
BmrFI	CCNGG	2 cut(s)	492, 678
BmsI	GCATC	2 cut(s)	31, 496
BpmI	CTGGAG	2 cut(s)	249, 660
Bpu14I	TTCGAA	1 cut(s)	527
BsaBI	GATNNNNATC	1 cut(s)	45
BsaJI	CCNNGG	1 cut(s)	677
Bsc4I	CCNNNNNNNGG	1 cut(s)	683
Bse1I	ACTGG	3 cut(s)	33, 77, 186
Bse3DI	GCAATG	1 cut(s)	198
Bse8I	GATNNNNATC	1 cut(s)	45
BseBI	CCWGG	2 cut(s)	492, 678
BseDI	CCNNGG	1 cut(s)	677
BseGI	GGATG	1 cut(s)	487
BseJI	GATNNNNATC	1 cut(s)	45
BseLI	CCNNNNNNNGG	1 cut(s)	683
BseMI	GCAATG	1 cut(s)	198
BseNI	ACTGG	3 cut(s)	33, 77, 186
BseSI	GKGCMC	1 cut(s)	331
BseXI	GCAGC	1 cut(s)	534
BshNI	GGYRCC	1 cut(s)	182
BsiHKAI	GWGCWC	1 cut(s)	331
BslFI	GGGAC	1 cut(s)	277
BslI	CCNNNNNNNGG	1 cut(s)	683
BsmFI	GGGAC	1 cut(s)	277
Bsp119I	TTCGAA	1 cut(s)	527
Bsp1286I	GDGCHC	1 cut(s)	331
Bsp143I	GATC	5 cut(s)	244, 299, 338, 377, 567
BspACI	CCGC	3 cut(s)	342, 381, 558
BspHI	TCATGA	1 cut(s)	418
BspLI	GGNNCC	2 cut(s)	184, 340
BspPI	GGATC	5 cut(s)	294, 333, 346, 372, 562
BspT104I	TTCGAA	1 cut(s)	527
BspT107I	GGYRCC	1 cut(s)	182
BsrDI	GCAATG	1 cut(s)	198
BsrI	ACTGG	3 cut(s)	33, 77, 186
BssECI	CCNNGG	1 cut(s)	677
BssMI	GATC	5 cut(s)	244, 299, 338, 377, 567
Bst2UI	CCWGG	2 cut(s)	492, 678
Bst4CI	ACNGT	4 cut(s)	54, 317, 356, 395
Bst6I	CTCTTC	1 cut(s)	657
BstBI	TTCGAA	1 cut(s)	527
BstC8I	GCNNGC	1 cut(s)	34
BstF5I	GGATG	1 cut(s)	487
BstHHI	GCGC	1 cut(s)	552
BstKTI	GATC	5 cut(s)	247, 302, 341, 380, 570
BstMBI	GATC	5 cut(s)	244, 299, 338, 377, 567
BstNI	CCWGG	2 cut(s)	492, 678
BstNSI	RCATGY	2 cut(s)	413, 487
BstSCI	CCNGG	2 cut(s)	490, 676
BstSLI	GKGCMC	1 cut(s)	331
BstV1I	GCAGC	1 cut(s)	534
BstX2I	RGATCY	1 cut(s)	338
BstYI	RGATCY	1 cut(s)	338
BtsCI	GGATG	1 cut(s)	487
BtsI	GCAGTG	1 cut(s)	21
BtsIMutI	CAGTG	3 cut(s)	21, 26, 621
Cac8I	GCNNGC	1 cut(s)	34
CciI	TCATGA	1 cut(s)	418
CfoI	GCGC	1 cut(s)	552
Cfr13I	GGNCC	1 cut(s)	82
Csp6I	GTAC	1 cut(s)	183
CviAII	CATG	6 cut(s)	365, 371, 404, 410, 419, 484
CviJI	RGCY	5 cut(s)	36, 110, 117, 638, 674
CviKI_1	RGCY	5 cut(s)	36, 110, 117, 638, 674
CviQI	GTAC	1 cut(s)	183
DpnI	GATC	5 cut(s)	246, 301, 340, 379, 569
DpnII	GATC	5 cut(s)	244, 299, 338, 377, 567
Eam1104I	CTCTTC	1 cut(s)	657
EarI	CTCTTC	1 cut(s)	657
EciI	GGCGGA	2 cut(s)	331, 370
Eco47I	GGWCC	1 cut(s)	82
EcoRII	CCWGG	2 cut(s)	490, 676
EcoT22I	ATGCAT	1 cut(s)	489
FaeI	CATG	6 cut(s)	368, 374, 407, 413, 422, 487
FaqI	GGGAC	1 cut(s)	277
FatI	CATG	6 cut(s)	364, 370, 403, 409, 418, 483
FauNDI	CATATG	2 cut(s)	99, 277
Fnu4HI	GCNGC	1 cut(s)	548
FokI	GGATG	1 cut(s)	474
Fsp4HI	GCNGC	1 cut(s)	548
FspBI	CTAG	3 cut(s)	173, 219, 519
FspI	TGCGCA	1 cut(s)	551
GlaI	GCGC	1 cut(s)	551
GluI	GCNGC	1 cut(s)	548
GsuI	CTGGAG	2 cut(s)	249, 660
HhaI	GCGC	1 cut(s)	552
Hin1II	CATG	6 cut(s)	368, 374, 407, 413, 422, 487
Hin6I	GCGC	1 cut(s)	550
HinP1I	GCGC	1 cut(s)	550
HinfI	GANTC	3 cut(s)	424, 563, 720
Hpy166II	GTNNAC	1 cut(s)	329
Hpy188I	TCNGA	1 cut(s)	625
Hpy188III	TCNNGA	3 cut(s)	62, 139, 419
Hpy8I	GTNNAC	1 cut(s)	329
Hpy99I	CGWCG	1 cut(s)	583
HpyAV	CCTTC	2 cut(s)	172, 329
HpyCH4III	ACNGT	4 cut(s)	54, 317, 356, 395
HpyCH4V	TGCA	6 cut(s)	7, 203, 329, 368, 407, 487
Hsp92II	CATG	6 cut(s)	368, 374, 407, 413, 422, 487
HspAI	GCGC	1 cut(s)	550
KpnI	GGTACC	1 cut(s)	186
Kzo9I	GATC	5 cut(s)	244, 299, 338, 377, 567
LmnI	GCTCC	1 cut(s)	679
Lsp1109I	GCAGC	1 cut(s)	534
LweI	GCATC	2 cut(s)	31, 496
MaeI	CTAG	3 cut(s)	173, 219, 519
MalI	GATC	5 cut(s)	246, 301, 340, 379, 569
MboI	GATC	5 cut(s)	244, 299, 338, 377, 567
MboII	GAAGA	4 cut(s)	161, 221, 460, 674
MfeI	CAATTG	1 cut(s)	657
MflI	RGATCY	1 cut(s)	338
MhlI	GDGCHC	1 cut(s)	331
MluCI	AATT	9 cut(s)	159, 523, 538, 587, 597, 608, 626, 645, 657
MlyI	GAGTC	2 cut(s)	572, 729
MmeI	TCCRAC	2 cut(s)	151, 262
MnlI	CCTC	6 cut(s)	206, 224, 314, 680, 686, 722
Mph1103I	ATGCAT	1 cut(s)	489
MseI	TTAA	2 cut(s)	144, 648
MslI	CAYNNNNRTG	4 cut(s)	369, 408, 441, 500
MspR9I	CCNGG	2 cut(s)	492, 678
MunI	CAATTG	1 cut(s)	657
MvaI	CCWGG	2 cut(s)	492, 678
NdeI	CATATG	2 cut(s)	99, 277
NdeII	GATC	5 cut(s)	244, 299, 338, 377, 567
NlaIII	CATG	6 cut(s)	368, 374, 407, 413, 422, 487
NlaIV	GGNNCC	2 cut(s)	184, 340
NsbI	TGCGCA	1 cut(s)	551
NsiI	ATGCAT	1 cut(s)	489
NspI	RCATGY	2 cut(s)	413, 487
NspV	TTCGAA	1 cut(s)	527
PagI	TCATGA	1 cut(s)	418
PcsI	WCGNNNNNNNCGW	1 cut(s)	533
PfeI	GAWTC	1 cut(s)	424
PkrI	GCNGC	1 cut(s)	549
PleI	GAGTC	2 cut(s)	571, 728
PpsI	GAGTC	2 cut(s)	571, 728
Psp6I	CCWGG	2 cut(s)	490, 676
PspGI	CCWGG	2 cut(s)	490, 676
PspN4I	GGNNCC	2 cut(s)	184, 340
PspPI	GGNCC	1 cut(s)	82
PsuI	RGATCY	1 cut(s)	338
RsaI	GTAC	1 cut(s)	184
RsaNI	GTAC	1 cut(s)	183
RseI	CAYNNNNRTG	4 cut(s)	369, 408, 441, 500
SaqAI	TTAA	2 cut(s)	144, 648
SatI	GCNGC	1 cut(s)	548
Sau3AI	GATC	5 cut(s)	244, 299, 338, 377, 567
Sau96I	GGNCC	1 cut(s)	82
SchI	GAGTC	2 cut(s)	572, 729
ScrFI	CCNGG	2 cut(s)	492, 678
SduI	GDGCHC	1 cut(s)	331
SetI	ASST	7 cut(s)	112, 133, 198, 274, 595, 676, 714
SfaNI	GCATC	2 cut(s)	31, 496
SfuI	TTCGAA	1 cut(s)	527
SinI	GGWCC	1 cut(s)	82
SmiMI	CAYNNNNRTG	4 cut(s)	369, 408, 441, 500
Sse9I	AATT	9 cut(s)	159, 523, 538, 587, 597, 608, 626, 645, 657
SsiI	CCGC	3 cut(s)	342, 381, 558
SspI	AATATT	1 cut(s)	702
SspMI	CTAG	3 cut(s)	173, 219, 519
StyD4I	CCNGG	2 cut(s)	490, 676
TaaI	ACNGT	4 cut(s)	54, 317, 356, 395
TaqI	TCGA	5 cut(s)	168, 243, 527, 566, 581
TaqII	GACCGA	1 cut(s)	70
TasI	AATT	9 cut(s)	159, 523, 538, 587, 597, 608, 626, 645, 657
TfiI	GAWTC	1 cut(s)	424
Tru1I	TTAA	2 cut(s)	144, 648
Tru9I	TTAA	2 cut(s)	144, 648
TscAI	CASTG	3 cut(s)	21, 33, 621
TseI	GCWGC	1 cut(s)	547
TspDTI	ATGAA	3 cut(s)	387, 518, 600
TspRI	CASTG	3 cut(s)	21, 33, 621
VneI	GTGCAC	1 cut(s)	327
VpaK11BI	GGWCC	1 cut(s)	82
XapI	RAATTY	4 cut(s)	523, 538, 597, 626
XceI	RCATGY	2 cut(s)	413, 487
XspI	CTAG	3 cut(s)	173, 219, 519
Zsp2I	ATGCAT	1 cut(s)	489

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.