pycom14g02730

Alpha beta hydrolase domain-containing protein 11-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
N/A
Physical Location & Seq
Reverse (-)
2089573 .. 2090332
760 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 420 bp
ATGCCCTGTGCGACAGCTCTCTCACAAAGAGTCGGGGATGCATGCGGAGTAGTTGACAGTTTTCGCCGTCCCCATGGCTCGGATCCTCGGAAACAAACCGGGTCTTCACCACCTCCTTACCCGTTTCACAATCTCACGACGGCCGCTGCAAACCCTAGCCTACTAAGAGCTCAGATTCTACGAAACAAGGAGATCACGGGACATGGGCCTCTGTTGGAGCACCCCACAAAAGATATGGAGATACCTGTTTTGCGTGCTGAGAACAGTGATCGTTGGGACCCGGATGTGGTGGTTCAACGGCTTGGAAGCCTTGCCAATCGAGAAGCCGATGGATCGGAGGGCAATGTCTCACTTCACGTTCTTCCCGAGTCCGCCCACTGGTCAATGGGTTCACATGGACAATCCGAAATGTCTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_6

Protein Analysis

140

Amino Acids

15.03

Weight (kDa)

6.13

Isoelectric Point (pI)

59.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 45, 144, 372
AclWI GGATC 3 cut(s) 77, 90, 340
AcoI YGGCCR 1 cut(s) 141
AfiI CCNNNNNNNGG 3 cut(s) 79, 286, 378
AgsI TTSAA 1 cut(s) 296
AluBI AGCT 2 cut(s) 17, 170
AluI AGCT 2 cut(s) 17, 170
Alw21I GWGCWC 2 cut(s) 172, 222
Alw26I GTCTC 1 cut(s) 352
AlwI GGATC 3 cut(s) 77, 90, 340
Ama87I CYCGRG 1 cut(s) 365
AoxI GGCC 2 cut(s) 141, 206
ApeKI GCWGC 1 cut(s) 146
AspS9I GGNCC 2 cut(s) 206, 277
AsuC2I CCSGG 2 cut(s) 100, 281
AsuHPI GGTGA 1 cut(s) 99
AvaI CYCGRG 1 cut(s) 365
AvaII GGWCC 1 cut(s) 277
BamHI GGATCC 1 cut(s) 82
BanII GRGCYC 1 cut(s) 172
BbsI GAAGAC 2 cut(s) 96, 405
Bbv12I GWGCWC 2 cut(s) 172, 222
BbvI GCAGC 1 cut(s) 133
BccI CCATC 1 cut(s) 323
BceAI ACGGC 3 cut(s) 51, 156, 314
BcnI CCSGG 2 cut(s) 100, 281
BcoDI GTCTC 1 cut(s) 352
BfaI CTAG 1 cut(s) 156
BisI GCNGC 2 cut(s) 144, 147
BlsI GCNGC 2 cut(s) 145, 148
Bme1390I CCNGG 2 cut(s) 100, 281
Bme18I GGWCC 1 cut(s) 277
BmeT110I CYCGRG 1 cut(s) 365
BmgT120I GGNCC 2 cut(s) 206, 277
BmiI GGNNCC 3 cut(s) 84, 278, 279
BmrFI CCNGG 2 cut(s) 100, 281
BmsI GCATC 1 cut(s) 28
BpiI GAAGAC 2 cut(s) 96, 405
BpuMI CCSGG 2 cut(s) 100, 281
BsaJI CCNNGG 2 cut(s) 73, 86
Bsc4I CCNNNNNNNGG 3 cut(s) 79, 286, 378
Bse1I ACTGG 1 cut(s) 383
Bse3DI GCAATG 1 cut(s) 349
BseDI CCNNGG 2 cut(s) 73, 86
BseGI GGATG 2 cut(s) 43, 289
BseLI CCNNNNNNNGG 3 cut(s) 79, 286, 378
BseMI GCAATG 1 cut(s) 349
BseMII CTCAG 2 cut(s) 185, 249
BseNI ACTGG 1 cut(s) 383
BseX3I CGGCCG 1 cut(s) 141
BseXI GCAGC 1 cut(s) 133
Bsh1285I CGRYCG 1 cut(s) 144
BshFI GGCC 2 cut(s) 143, 208
BsiEI CGRYCG 1 cut(s) 144
BsiHKAI GWGCWC 2 cut(s) 172, 222
BsiHKCI CYCGRG 1 cut(s) 365
BsiSI CCGG 2 cut(s) 99, 281
BslFI GGGAC 3 cut(s) 54, 213, 290
BslI CCNNNNNNNGG 3 cut(s) 79, 286, 378
BsmAI GTCTC 1 cut(s) 352
BsmFI GGGAC 3 cut(s) 54, 213, 290
BsnI GGCC 2 cut(s) 143, 208
BsoBI CYCGRG 1 cut(s) 365
Bsp1286I GDGCHC 2 cut(s) 172, 222
Bsp143I GATC 4 cut(s) 82, 192, 268, 332
Bsp19I CCATGG 1 cut(s) 73
BspACI CCGC 3 cut(s) 45, 144, 372
BspANI GGCC 2 cut(s) 143, 208
BspCNI CTCAG 2 cut(s) 184, 250
BspLI GGNNCC 3 cut(s) 84, 278, 279
BspPI GGATC 3 cut(s) 77, 90, 340
BsrDI GCAATG 1 cut(s) 349
BsrI ACTGG 1 cut(s) 383
BssECI CCNNGG 2 cut(s) 73, 86
BssMI GATC 4 cut(s) 82, 192, 268, 332
BssT1I CCWWGG 1 cut(s) 73
Bst4CI ACNGT 2 cut(s) 59, 266
BstC8I GCNNGC 2 cut(s) 43, 255
BstDEI CTNAG 3 cut(s) 164, 171, 258
BstDSI CCRYGG 1 cut(s) 73
BstF5I GGATG 2 cut(s) 43, 289
BstKTI GATC 4 cut(s) 85, 195, 271, 335
BstMAI GTCTC 1 cut(s) 352
BstMBI GATC 4 cut(s) 82, 192, 268, 332
BstMCI CGRYCG 1 cut(s) 144
BstNSI RCATGY 1 cut(s) 45
BstSCI CCNGG 2 cut(s) 98, 279
BstV1I GCAGC 1 cut(s) 133
BstV2I GAAGAC 2 cut(s) 96, 405
BstX2I RGATCY 1 cut(s) 82
BstYI RGATCY 1 cut(s) 82
BstZI CGGCCG 1 cut(s) 141
BsuRI GGCC 2 cut(s) 143, 208
BtgI CCRYGG 1 cut(s) 73
BtsCI GGATG 2 cut(s) 43, 289
BtsIMutI CAGTG 2 cut(s) 271, 376
Cac8I GCNNGC 2 cut(s) 43, 255
Cfr13I GGNCC 2 cut(s) 206, 277
CviAII CATG 4 cut(s) 42, 74, 203, 395
CviJI RGCY 9 cut(s) 17, 78, 143, 159, 170, 208, 301, 309, 326
CviKI_1 RGCY 9 cut(s) 17, 78, 143, 159, 170, 208, 301, 309, 326
DdeI CTNAG 3 cut(s) 164, 171, 258
DpnI GATC 4 cut(s) 84, 194, 270, 334
DpnII GATC 4 cut(s) 82, 192, 268, 332
EaeI YGGCCR 1 cut(s) 141
EagI CGGCCG 1 cut(s) 141
EciI GGCGGA 1 cut(s) 361
Ecl136II GAGCTC 1 cut(s) 170
EclXI CGGCCG 1 cut(s) 141
Eco130I CCWWGG 1 cut(s) 73
Eco24I GRGCYC 1 cut(s) 172
Eco47I GGWCC 1 cut(s) 277
Eco52I CGGCCG 1 cut(s) 141
Eco53kI GAGCTC 1 cut(s) 170
Eco88I CYCGRG 1 cut(s) 365
EcoICRI GAGCTC 1 cut(s) 170
EcoO109I RGGNCCY 1 cut(s) 277
EcoT14I CCWWGG 1 cut(s) 73
EcoT22I ATGCAT 1 cut(s) 43
EcoT38I GRGCYC 1 cut(s) 172
ErhI CCWWGG 1 cut(s) 73
FaeI CATG 4 cut(s) 45, 77, 206, 398
FaiI YATR 5 cut(s) 43, 75, 204, 236, 396
FaqI GGGAC 3 cut(s) 54, 213, 290
FatI CATG 4 cut(s) 41, 73, 202, 394
Fnu4HI GCNGC 2 cut(s) 144, 147
FokI GGATG 2 cut(s) 50, 296
FriOI GRGCYC 1 cut(s) 172
Fsp4HI GCNGC 2 cut(s) 144, 147
FspBI CTAG 1 cut(s) 156
GluI GCNGC 2 cut(s) 144, 147
HaeIII GGCC 2 cut(s) 143, 208
HapII CCGG 2 cut(s) 99, 281
Hin1II CATG 4 cut(s) 45, 77, 206, 398
HincII GTYRAC 1 cut(s) 55
HindII GTYRAC 1 cut(s) 55
HinfI GANTC 3 cut(s) 30, 175, 368
HpaII CCGG 2 cut(s) 99, 281
HphI GGTGA 1 cut(s) 99
Hpy166II GTNNAC 2 cut(s) 55, 392
Hpy188I TCNGA 5 cut(s) 82, 90, 174, 337, 406
Hpy188III TCNNGA 4 cut(s) 136, 320, 365, 417
Hpy8I GTNNAC 2 cut(s) 55, 392
Hpy99I CGWCG 1 cut(s) 142
HpyCH4III ACNGT 2 cut(s) 59, 266
HpyCH4IV ACGT 1 cut(s) 357
HpyCH4V TGCA 2 cut(s) 41, 149
HpyF3I CTNAG 3 cut(s) 164, 171, 258
HpySE526I ACGT 1 cut(s) 357
Hsp92II CATG 4 cut(s) 45, 77, 206, 398
KflI GGGWCCC 1 cut(s) 277
Kzo9I GATC 4 cut(s) 82, 192, 268, 332
LmnI GCTCC 1 cut(s) 217
LpnPI CCDG 5 cut(s) 19, 112, 258, 294, 364
Lsp1109I GCAGC 1 cut(s) 133
LweI GCATC 1 cut(s) 28
MaeI CTAG 1 cut(s) 156
MaeII ACGT 1 cut(s) 357
MalI GATC 4 cut(s) 84, 194, 270, 334
MboI GATC 4 cut(s) 82, 192, 268, 332
MboII GAAGA 3 cut(s) 96, 353, 405
MflI RGATCY 1 cut(s) 82
MhlI GDGCHC 2 cut(s) 172, 222
MlyI GAGTC 2 cut(s) 39, 377
MmeI TCCRAC 1 cut(s) 195
MnlI CCTC 4 cut(s) 96, 123, 219, 331
Mph1103I ATGCAT 1 cut(s) 43
MspA1I CMGCKG 1 cut(s) 146
MspI CCGG 2 cut(s) 99, 281
MspR9I CCNGG 2 cut(s) 100, 281
NciI CCSGG 2 cut(s) 100, 281
NcoI CCATGG 1 cut(s) 73
NdeII GATC 4 cut(s) 82, 192, 268, 332
NlaIII CATG 4 cut(s) 45, 77, 206, 398
NlaIV GGNNCC 3 cut(s) 84, 278, 279
NsiI ATGCAT 1 cut(s) 43
NspI RCATGY 1 cut(s) 45
PaeI GCATGC 1 cut(s) 45
PcsI WCGNNNNNNNCGW 1 cut(s) 363
PfeI GAWTC 1 cut(s) 175
PkrI GCNGC 2 cut(s) 145, 148
PleI GAGTC 2 cut(s) 38, 376
PpsI GAGTC 2 cut(s) 38, 376
PpuMI RGGWCCY 1 cut(s) 277
Psp124BI GAGCTC 1 cut(s) 172
Psp5II RGGWCCY 1 cut(s) 277
PspN4I GGNNCC 3 cut(s) 84, 278, 279
PspPI GGNCC 2 cut(s) 206, 277
PspPPI RGGWCCY 1 cut(s) 277
PsuI RGATCY 1 cut(s) 82
SacI GAGCTC 1 cut(s) 172
SatI GCNGC 2 cut(s) 144, 147
Sau3AI GATC 4 cut(s) 82, 192, 268, 332
Sau96I GGNCC 2 cut(s) 206, 277
SchI GAGTC 2 cut(s) 39, 377
ScrFI CCNGG 2 cut(s) 100, 281
SduI GDGCHC 2 cut(s) 172, 222
SetI ASST 5 cut(s) 19, 115, 172, 247, 360
SfaNI GCATC 1 cut(s) 28
SinI GGWCC 1 cut(s) 277
SphI GCATGC 1 cut(s) 45
SsiI CCGC 3 cut(s) 45, 144, 372
SspMI CTAG 1 cut(s) 156
SstI GAGCTC 1 cut(s) 172
StyD4I CCNGG 2 cut(s) 98, 279
StyI CCWWGG 1 cut(s) 73
TaaI ACNGT 2 cut(s) 59, 266
TaiI ACGT 1 cut(s) 360
TaqI TCGA 1 cut(s) 319
TauI GCSGC 1 cut(s) 146
TfiI GAWTC 1 cut(s) 175
TscAI CASTG 2 cut(s) 271, 383
TseI GCWGC 1 cut(s) 146
TspRI CASTG 2 cut(s) 271, 383
VpaK11BI GGWCC 1 cut(s) 277
XceI RCATGY 1 cut(s) 45
XcmI CCANNNNNNNNNTGG 1 cut(s) 232
XspI CTAG 1 cut(s) 156
Zsp2I ATGCAT 1 cut(s) 43
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.