pycom14g07180

Plant calmodulin-binding domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
N/A
Physical Location & Seq
Reverse (-)
7187919 .. 7188212
294 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 294 bp
ATGGATGATAAGGAGCTTGAATTTGGAGCTGATTTGGGTTCCAGCCAAATGTGTGAGAAATTGTCACCATCTGTTTTGCAAAACCAGAATGGCGGACGCCAAGGAGAGCTGCTGCTGCAGAAGAAGAAGAAGAAGAAATTGAAAAAGTTGACATCAATCAAGCTCTCCAAATCACCAAGCCTGAAGCCGTCCCGAAAAAGATCCAGCAGTATATCCAATCACCATGTATCCTCCACTGATGGTTCTTATGATACAAGTACAGAAAACCTACAGGCAAGTCTGTTAAATTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

98

Amino Acids

10.63

Weight (kDa)

9.72

Isoelectric Point (pI)

48.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 93
AclWI GGATC 1 cut(s) 195
AcsI RAATTY 2 cut(s) 20, 286
AcuI CTGAAG 1 cut(s) 203
AcyI GRCGYC 1 cut(s) 97
AfaI GTAC 1 cut(s) 259
AgsI TTSAA 2 cut(s) 20, 142
AluBI AGCT 4 cut(s) 16, 29, 109, 163
AluI AGCT 4 cut(s) 16, 29, 109, 163
AlwI GGATC 1 cut(s) 195
ApeKI GCWGC 3 cut(s) 109, 112, 115
ApoI RAATTY 2 cut(s) 20, 286
AsuHPI GGTGA 3 cut(s) 57, 165, 212
BbvI GCAGC 3 cut(s) 96, 99, 102
BccI CCATC 2 cut(s) 76, 233
BceAI ACGGC 1 cut(s) 172
BciVI GTATCC 1 cut(s) 238
BfmI CTRYAG 2 cut(s) 116, 269
BfuI GTATCC 1 cut(s) 238
BisI GCNGC 3 cut(s) 110, 113, 116
BlsI GCNGC 3 cut(s) 111, 114, 117
BmiI GGNNCC 1 cut(s) 40
BsaHI GRCGYC 1 cut(s) 97
BsaJI CCNNGG 1 cut(s) 100
BseDI CCNNGG 1 cut(s) 100
BseGI GGATG 1 cut(s) 10
BseXI GCAGC 3 cut(s) 96, 99, 102
BslFI GGGAC 1 cut(s) 175
BsmFI GGGAC 1 cut(s) 175
Bsp143I GATC 1 cut(s) 200
BspACI CCGC 1 cut(s) 93
BspLI GGNNCC 1 cut(s) 40
BspMAI CTGCAG 1 cut(s) 120
BspPI GGATC 1 cut(s) 195
BssECI CCNNGG 1 cut(s) 100
BssMI GATC 1 cut(s) 200
BssNI GRCGYC 1 cut(s) 97
BssT1I CCWWGG 1 cut(s) 100
BstACI GRCGYC 1 cut(s) 97
BstF5I GGATG 1 cut(s) 10
BstKTI GATC 1 cut(s) 203
BstMBI GATC 1 cut(s) 200
BstMWI GCNNNNNNNGC 1 cut(s) 115
BstSFI CTRYAG 2 cut(s) 116, 269
BstV1I GCAGC 3 cut(s) 96, 99, 102
BstX2I RGATCY 1 cut(s) 200
BstYI RGATCY 1 cut(s) 200
BsuI GTATCC 1 cut(s) 238
BtsCI GGATG 1 cut(s) 10
BtsIMutI CAGTG 1 cut(s) 234
CseI GACGC 1 cut(s) 105
Csp6I GTAC 1 cut(s) 258
CviAII CATG 1 cut(s) 224
CviJI RGCY 7 cut(s) 16, 29, 45, 109, 163, 180, 187
CviKI_1 RGCY 7 cut(s) 16, 29, 45, 109, 163, 180, 187
CviQI GTAC 1 cut(s) 258
DpnI GATC 1 cut(s) 202
DpnII GATC 1 cut(s) 200
EciI GGCGGA 1 cut(s) 108
Eco130I CCWWGG 1 cut(s) 100
Eco57I CTGAAG 1 cut(s) 203
EcoT14I CCWWGG 1 cut(s) 100
ErhI CCWWGG 1 cut(s) 100
FaeI CATG 1 cut(s) 227
FaiI YATR 3 cut(s) 212, 225, 249
FaqI GGGAC 1 cut(s) 175
FatI CATG 1 cut(s) 223
Fnu4HI GCNGC 3 cut(s) 110, 113, 116
FokI GGATG 1 cut(s) 17
Fsp4HI GCNGC 3 cut(s) 110, 113, 116
GluI GCNGC 3 cut(s) 110, 113, 116
HgaI GACGC 1 cut(s) 105
Hin1I GRCGYC 1 cut(s) 97
Hin1II CATG 1 cut(s) 227
HincII GTYRAC 1 cut(s) 150
HindII GTYRAC 1 cut(s) 150
HphI GGTGA 3 cut(s) 57, 165, 212
Hpy166II GTNNAC 1 cut(s) 150
Hpy188III TCNNGA 2 cut(s) 192, 291
Hpy8I GTNNAC 1 cut(s) 150
HpyCH4V TGCA 2 cut(s) 79, 118
HpyF10VI GCNNNNNNNGC 1 cut(s) 115
Hsp92I GRCGYC 1 cut(s) 97
Hsp92II CATG 1 cut(s) 227
Kzo9I GATC 1 cut(s) 200
LmnI GCTCC 2 cut(s) 13, 26
LpnPI CCDG 5 cut(s) 55, 98, 194, 217, 257
Lsp1109I GCAGC 3 cut(s) 96, 99, 102
MaeIII GTNAC 1 cut(s) 63
MalI GATC 1 cut(s) 202
MboI GATC 1 cut(s) 200
MboII GAAGA 5 cut(s) 133, 136, 139, 142, 145
MflI RGATCY 1 cut(s) 200
MluCI AATT 4 cut(s) 20, 59, 137, 286
MnlI CCTC 1 cut(s) 241
MseI TTAA 1 cut(s) 284
MwoI GCNNNNNNNGC 1 cut(s) 115
NdeII GATC 1 cut(s) 200
NlaIII CATG 1 cut(s) 227
NlaIV GGNNCC 1 cut(s) 40
NmuCI GTSAC 1 cut(s) 63
PkrI GCNGC 3 cut(s) 111, 114, 117
PspN4I GGNNCC 1 cut(s) 40
PstI CTGCAG 1 cut(s) 120
PsuI RGATCY 1 cut(s) 200
RsaI GTAC 1 cut(s) 259
RsaNI GTAC 1 cut(s) 258
SaqAI TTAA 1 cut(s) 284
SatI GCNGC 3 cut(s) 110, 113, 116
Sau3AI GATC 1 cut(s) 200
SetI ASST 5 cut(s) 18, 31, 111, 165, 270
SfcI CTRYAG 2 cut(s) 116, 269
Sse9I AATT 4 cut(s) 20, 59, 137, 286
SsiI CCGC 1 cut(s) 93
StyI CCWWGG 1 cut(s) 100
TasI AATT 4 cut(s) 20, 59, 137, 286
TatI WGTACW 1 cut(s) 257
Tru1I TTAA 1 cut(s) 284
Tru9I TTAA 1 cut(s) 284
TscAI CASTG 1 cut(s) 241
TseFI GTSAC 1 cut(s) 63
TseI GCWGC 3 cut(s) 109, 112, 115
Tsp45I GTSAC 1 cut(s) 63
TspRI CASTG 1 cut(s) 241
XapI RAATTY 2 cut(s) 20, 286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.