pycom14g12560

receptor-like protein kinase At1g67000

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
N/A
Physical Location & Seq
Forward (+)
15545868 .. 15546726
859 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 348 bp
ATGGCAACTGCACAAATAGGGGTTTTGAATTGGAAATTAGGGTTGTTGAACATTTGTGAGGAGTCAGGAGGGAAGTGTGGGATTAGCACTTGTACTGGTGGATTCAGTTGCTTTTGCAAAGATCTGGCTGCTCATGCAATTGCAACCACATGCAATTCAACTTCATCGGAACTTTGGAGGAGTGTCTCACACGTGTACAGCTACGGAATGCTGGTTCTTGAAATGGTTGGAGCAAGAAAGAATTTGGATTCCGGAGTGTCTCATACGAGCAAAATGTTTCTGCATTACGTGCATACAGATCTAGAGTTAGAGAACAATAAGAATGTTTTTGGGGCTATCGATCACTGA

Protein Analysis

116

Amino Acids

12.45

Weight (kDa)

6.26

Isoelectric Point (pI)

37.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 251
AcsI RAATTY 1 cut(s) 241
AcvI CACGTG 1 cut(s) 193
AfaI GTAC 2 cut(s) 94, 197
AflIII ACRYGT 2 cut(s) 190, 192
AgsI TTSAA 4 cut(s) 28, 49, 159, 221
AloI GAACNNNNNNTCC 2 cut(s) 198, 230
AluBI AGCT 1 cut(s) 201
AluI AGCT 1 cut(s) 201
Alw26I GTCTC 2 cut(s) 190, 264
Aor13HI TCCGGA 1 cut(s) 251
ApeKI GCWGC 1 cut(s) 128
ApoI RAATTY 1 cut(s) 241
BbrPI CACGTG 1 cut(s) 193
BbvI GCAGC 1 cut(s) 115
BcoDI GTCTC 2 cut(s) 190, 264
BfaI CTAG 1 cut(s) 302
BglII AGATCT 2 cut(s) 121, 298
BisI GCNGC 1 cut(s) 129
BlsI GCNGC 1 cut(s) 130
Bsa29I ATCGAT 1 cut(s) 339
BsaAI YACGTR 2 cut(s) 193, 289
BsaWI WCCGGW 1 cut(s) 251
Bse1I ACTGG 1 cut(s) 100
BseAI TCCGGA 1 cut(s) 251
BseCI ATCGAT 1 cut(s) 339
BseNI ACTGG 1 cut(s) 100
BseRI GAGGAG 2 cut(s) 74, 193
BseXI GCAGC 1 cut(s) 115
BshVI ATCGAT 1 cut(s) 339
BsiSI CCGG 1 cut(s) 252
BsmAI GTCTC 2 cut(s) 190, 264
BsmI GAATGC 1 cut(s) 213
Bsp13I TCCGGA 1 cut(s) 251
Bsp1407I TGTACA 1 cut(s) 195
Bsp143I GATC 3 cut(s) 121, 298, 340
BspDI ATCGAT 1 cut(s) 339
BspEI TCCGGA 1 cut(s) 251
BsrGI TGTACA 1 cut(s) 195
BsrI ACTGG 1 cut(s) 100
BssMI GATC 3 cut(s) 121, 298, 340
BstAPI GCANNNNNTGC 1 cut(s) 289
BstAUI TGTACA 1 cut(s) 195
BstBAI YACGTR 2 cut(s) 193, 289
BstKTI GATC 3 cut(s) 124, 301, 343
BstMAI GTCTC 2 cut(s) 190, 264
BstMBI GATC 3 cut(s) 121, 298, 340
BstMWI GCNNNNNNNGC 2 cut(s) 134, 289
BstNSI RCATGY 1 cut(s) 153
BstV1I GCAGC 1 cut(s) 115
BstX2I RGATCY 2 cut(s) 121, 298
BstYI RGATCY 2 cut(s) 121, 298
Bsu15I ATCGAT 1 cut(s) 339
BsuTUI ATCGAT 1 cut(s) 339
BtsIMutI CAGTG 1 cut(s) 343
ClaI ATCGAT 1 cut(s) 339
Csp6I GTAC 2 cut(s) 93, 196
CviAII CATG 2 cut(s) 134, 150
CviJI RGCY 3 cut(s) 128, 201, 335
CviKI_1 RGCY 3 cut(s) 128, 201, 335
CviQI GTAC 2 cut(s) 93, 196
DpnI GATC 3 cut(s) 123, 300, 342
DpnII GATC 3 cut(s) 121, 298, 340
Eco72I CACGTG 1 cut(s) 193
FaeI CATG 2 cut(s) 137, 153
FaiI YATR 4 cut(s) 135, 151, 264, 294
FatI CATG 2 cut(s) 133, 149
Fnu4HI GCNGC 1 cut(s) 129
Fsp4HI GCNGC 1 cut(s) 129
FspBI CTAG 1 cut(s) 302
GluI GCNGC 1 cut(s) 129
HapII CCGG 1 cut(s) 252
Hin1II CATG 2 cut(s) 137, 153
HinfI GANTC 3 cut(s) 62, 102, 248
HpaII CCGG 1 cut(s) 252
Hpy166II GTNNAC 1 cut(s) 196
Hpy188I TCNGA 1 cut(s) 169
Hpy188III TCNNGA 4 cut(s) 66, 218, 252, 302
Hpy8I GTNNAC 1 cut(s) 196
HpyCH4IV ACGT 2 cut(s) 192, 288
HpyCH4V TGCA 7 cut(s) 11, 117, 137, 143, 153, 283, 292
HpyF10VI GCNNNNNNNGC 2 cut(s) 134, 289
HpySE526I ACGT 2 cut(s) 192, 288
Hsp92II CATG 2 cut(s) 137, 153
Kpn2I TCCGGA 1 cut(s) 251
Kzo9I GATC 3 cut(s) 121, 298, 340
LmnI GCTCC 1 cut(s) 230
LpnPI CCDG 5 cut(s) 51, 81, 110, 197, 265
Lsp1109I GCAGC 1 cut(s) 115
MaeI CTAG 1 cut(s) 302
MaeII ACGT 2 cut(s) 192, 288
MalI GATC 3 cut(s) 123, 300, 342
MboI GATC 3 cut(s) 121, 298, 340
MfeI CAATTG 1 cut(s) 138
MflI RGATCY 2 cut(s) 121, 298
MluCI AATT 5 cut(s) 28, 35, 138, 154, 241
MlyI GAGTC 1 cut(s) 71
MmeI TCCRAC 1 cut(s) 208
MnlI CCTC 3 cut(s) 52, 62, 171
MroI TCCGGA 1 cut(s) 251
MspI CCGG 1 cut(s) 252
MunI CAATTG 1 cut(s) 138
Mva1269I GAATGC 1 cut(s) 213
MwoI GCNNNNNNNGC 2 cut(s) 134, 289
NdeII GATC 3 cut(s) 121, 298, 340
NlaIII CATG 2 cut(s) 137, 153
NspI RCATGY 1 cut(s) 153
PctI GAATGC 1 cut(s) 213
PfeI GAWTC 2 cut(s) 102, 248
PkrI GCNGC 1 cut(s) 130
PleI GAGTC 1 cut(s) 70
PmaCI CACGTG 1 cut(s) 193
PmlI CACGTG 1 cut(s) 193
PpsI GAGTC 1 cut(s) 70
Ppu21I YACGTR 2 cut(s) 193, 289
PspCI CACGTG 1 cut(s) 193
PsuI RGATCY 2 cut(s) 121, 298
RsaI GTAC 2 cut(s) 94, 197
RsaNI GTAC 2 cut(s) 93, 196
SatI GCNGC 1 cut(s) 129
Sau3AI GATC 3 cut(s) 121, 298, 340
SchI GAGTC 1 cut(s) 71
SetI ASST 3 cut(s) 195, 203, 291
Sse9I AATT 5 cut(s) 28, 35, 138, 154, 241
SspMI CTAG 1 cut(s) 302
TaiI ACGT 2 cut(s) 195, 291
TaqI TCGA 1 cut(s) 339
TasI AATT 5 cut(s) 28, 35, 138, 154, 241
TatI WGTACW 2 cut(s) 92, 195
TfiI GAWTC 2 cut(s) 102, 248
TseI GCWGC 1 cut(s) 128
TspDTI ATGAA 1 cut(s) 153
TspGWI ACGGA 1 cut(s) 219
XapI RAATTY 1 cut(s) 241
XbaI TCTAGA 1 cut(s) 301
XceI RCATGY 1 cut(s) 153
XspI CTAG 1 cut(s) 302
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.