pycom14g16830

DnaJ molecular chaperone homology domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
N/A
Physical Location & Seq
Forward (+)
19007770 .. 19008777
1008 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 708 bp
ATGCGTGGAGTAAGTGTGTTTCATATCATTTTATTCCACAATATTGCTCTAATTTTTGGTTTGCGTCGAGTATTTAGAACCATTCGCAGGGTTGAAGAGAAGTTGTCAAACGAAGTCGAGACAAGGTCAGCTGATGAAGAGCAATCTATAGCATCAGCAGCAGGTGCGCTTAAAAGCAAACGACTGCCATTTGCTTGGCTTGACGGAGAAGCCCAAAAGGTGAACCTTTGTGTGTTGTTCGTGTTTTTAACTGGTGAGAAGCCCGGGAAAAAGCCGAAAACCATATGGGATGCACTGCAAGACCAGGAACTAGATCCTGCATCGCAGCTTGTGGCAAAGTACAATGGTTCAGATGATACTCGGGAGGTATCTAACTATATGTTTGGATTCTTGATGTCGCATAATACTTACAATCAATGCCTCAGACGTCACATAATCCAAATTTTCTCTAAGTTGGTGGCCTCGTCTCATACGAGCAGTTTCATAAACTACTCTTTTGTCAAGAGCTTTACTTTAAATTTCAATTTTTGTTTCCATTGCAGAGAACAAGAACTCCTCATTTGGTTCCCGAGGATTCAGAGCCAATGTGGTCAGCAGGTGTCCAAAGAATTCCTTCAACAAACACGATCATTCAGAGCATCCGTGGAATTTTATGCAGAATCTATGATCGCATTGGAGATCCAAGGGTTGGTCCAATGTTGCTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001671 GO:0001932 GO:0001933 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005788 GO:0006457 GO:0006508 GO:0006511 GO:0006807 GO:0006915 GO:0006950 GO:0007154 GO:0007165 GO:0008047 GO:0008150 GO:0008152 GO:0008219 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0010563 GO:0010605 GO:0012501 GO:0012505 GO:0015035 GO:0015036 GO:0016491 GO:0016667 GO:0016671 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0023052 GO:0030163 GO:0030234 GO:0030433 GO:0030544 GO:0031072 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031974 GO:0032268 GO:0032269 GO:0032781 GO:0032991 GO:0033554 GO:0034663 GO:0034975 GO:0034976 GO:0035556 GO:0036503 GO:0042221 GO:0042325 GO:0042326 GO:0043085 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043462 GO:0043632 GO:0044093 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045936 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051087 GO:0051117 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051336 GO:0051345 GO:0051603 GO:0051716 GO:0051787 GO:0055114 GO:0060255 GO:0060589 GO:0060590 GO:0065007 GO:0065009 GO:0070013 GO:0070059 GO:0071704 GO:0080090 GO:0097190 GO:0097193 GO:0098772 GO:1901564 GO:1901565 GO:1901575 GO:1901698
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ

Protein Analysis

236

Amino Acids

27.12

Weight (kDa)

8.68

Isoelectric Point (pI)

53.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 152, 586
AatII GACGTC 1 cut(s) 430
Acc36I ACCTGC 2 cut(s) 152, 586
AccB7I CCANNNNNTGG 1 cut(s) 688
AclWI GGATC 2 cut(s) 308, 673
AcsI RAATTY 4 cut(s) 441, 517, 608, 647
AcyI GRCGYC 1 cut(s) 427
AfaI GTAC 1 cut(s) 341
AfiI CCNNNNNNNGG 2 cut(s) 87, 688
AgsI TTSAA 3 cut(s) 95, 523, 617
AjnI CCWGG 1 cut(s) 303
AloI GAACNNNNNNTCC 2 cut(s) 537, 569
AluBI AGCT 3 cut(s) 131, 328, 507
AluI AGCT 3 cut(s) 131, 328, 507
Alw26I GTCTC 2 cut(s) 113, 471
AlwI GGATC 2 cut(s) 308, 673
Ama87I CYCGRG 3 cut(s) 263, 360, 568
AoxI GGCC 1 cut(s) 459
ApeKI GCWGC 2 cut(s) 158, 325
ApoI RAATTY 4 cut(s) 441, 517, 608, 647
Asp700I GAANNNNTTC 1 cut(s) 612
AspLEI GCGC 1 cut(s) 169
AspS9I GGNCC 1 cut(s) 691
AsuC2I CCSGG 2 cut(s) 264, 265
AsuHPI GGTGA 2 cut(s) 232, 266
AvaI CYCGRG 3 cut(s) 263, 360, 568
AvaII GGWCC 1 cut(s) 691
BbvI GCAGC 2 cut(s) 170, 337
BciT130I CCWGG 1 cut(s) 305
BcnI CCSGG 2 cut(s) 264, 265
BcoDI GTCTC 2 cut(s) 113, 471
BfaI CTAG 2 cut(s) 311, 706
BfmI CTRYAG 1 cut(s) 147
BfuAI ACCTGC 2 cut(s) 152, 586
BisI GCNGC 2 cut(s) 159, 326
BlsI GCNGC 2 cut(s) 160, 327
Bme1390I CCNGG 3 cut(s) 264, 265, 305
Bme18I GGWCC 1 cut(s) 691
BmeT110I CYCGRG 3 cut(s) 263, 360, 568
BmgT120I GGNCC 1 cut(s) 691
BmiI GGNNCC 1 cut(s) 566
BmrFI CCNGG 3 cut(s) 264, 265, 305
BmsI GCATC 4 cut(s) 161, 280, 329, 647
BpuMI CCSGG 2 cut(s) 264, 265
BsaHI GRCGYC 1 cut(s) 427
BsaJI CCNNGG 4 cut(s) 263, 569, 642, 682
BsaXI ACNNNNNCTCC 3 cut(s) 30, 537, 567
Bsc4I CCNNNNNNNGG 2 cut(s) 87, 688
Bse1I ACTGG 1 cut(s) 256
Bse3DI GCAATG 1 cut(s) 535
BseBI CCWGG 1 cut(s) 305
BseDI CCNNGG 4 cut(s) 263, 569, 642, 682
BseGI GGATG 2 cut(s) 295, 638
BseLI CCNNNNNNNGG 2 cut(s) 87, 688
BseMI GCAATG 1 cut(s) 535
BseMII CTCAG 1 cut(s) 436
BseNI ACTGG 1 cut(s) 256
BseRI GAGGAG 1 cut(s) 545
BseXI GCAGC 2 cut(s) 170, 337
BshFI GGCC 1 cut(s) 461
BsiHKCI CYCGRG 3 cut(s) 263, 360, 568
BsiSI CCGG 1 cut(s) 264
BslI CCNNNNNNNGG 2 cut(s) 87, 688
BsmAI GTCTC 2 cut(s) 113, 471
BsmBI CGTCTC 1 cut(s) 471
BsnI GGCC 1 cut(s) 461
BsoBI CYCGRG 3 cut(s) 263, 360, 568
Bsp143I GATC 4 cut(s) 313, 626, 666, 678
BspANI GGCC 1 cut(s) 461
BspCNI CTCAG 1 cut(s) 435
BspLI GGNNCC 1 cut(s) 566
BspMI ACCTGC 2 cut(s) 152, 586
BspPI GGATC 2 cut(s) 308, 673
BspQI GCTCTTC 1 cut(s) 132
BsrDI GCAATG 1 cut(s) 535
BsrI ACTGG 1 cut(s) 256
BssECI CCNNGG 4 cut(s) 263, 569, 642, 682
BssMI GATC 4 cut(s) 313, 626, 666, 678
BssNI GRCGYC 1 cut(s) 427
BssT1I CCWWGG 1 cut(s) 682
Bst2UI CCWGG 1 cut(s) 305
Bst6I CTCTTC 2 cut(s) 90, 132
BstACI GRCGYC 1 cut(s) 427
BstAPI GCANNNNNTGC 1 cut(s) 164
BstDEI CTNAG 2 cut(s) 422, 450
BstDSI CCRYGG 1 cut(s) 642
BstF5I GGATG 2 cut(s) 295, 638
BstHHI GCGC 1 cut(s) 169
BstKTI GATC 4 cut(s) 316, 629, 669, 681
BstMAI GTCTC 2 cut(s) 113, 471
BstMBI GATC 4 cut(s) 313, 626, 666, 678
BstMWI GCNNNNNNNGC 2 cut(s) 158, 164
BstNI CCWGG 1 cut(s) 305
BstSCI CCNGG 3 cut(s) 262, 263, 303
BstSFI CTRYAG 1 cut(s) 147
BstV1I GCAGC 2 cut(s) 170, 337
BstX2I RGATCY 2 cut(s) 313, 678
BstXI CCANNNNNNTGG 1 cut(s) 195
BstYI RGATCY 2 cut(s) 313, 678
BsuRI GGCC 1 cut(s) 461
BtgI CCRYGG 1 cut(s) 642
BtgZI GCGATG 1 cut(s) 306
BtsCI GGATG 2 cut(s) 295, 638
BtsI GCAGTG 1 cut(s) 293
BtsIMutI CAGTG 1 cut(s) 293
BveI ACCTGC 2 cut(s) 152, 586
CfoI GCGC 1 cut(s) 169
Cfr13I GGNCC 1 cut(s) 691
Cfr9I CCCGGG 1 cut(s) 263
CseI GACGC 1 cut(s) 53
Csp6I GTAC 1 cut(s) 340
CviJI RGCY 9 cut(s) 131, 199, 212, 262, 274, 328, 461, 507, 582
CviKI_1 RGCY 9 cut(s) 131, 199, 212, 262, 274, 328, 461, 507, 582
CviQI GTAC 1 cut(s) 340
DdeI CTNAG 2 cut(s) 422, 450
DpnI GATC 4 cut(s) 315, 628, 668, 680
DpnII GATC 4 cut(s) 313, 626, 666, 678
DraI TTTAAA 1 cut(s) 516
Eam1104I CTCTTC 2 cut(s) 90, 132
EarI CTCTTC 2 cut(s) 90, 132
Eco130I CCWWGG 1 cut(s) 682
Eco47I GGWCC 1 cut(s) 691
Eco88I CYCGRG 3 cut(s) 263, 360, 568
EcoRI GAATTC 1 cut(s) 608
EcoRII CCWGG 1 cut(s) 303
EcoT14I CCWWGG 1 cut(s) 682
ErhI CCWWGG 1 cut(s) 682
Esp3I CGTCTC 1 cut(s) 471
FalI AAGNNNNNCTT 2 cut(s) 597, 629
FauNDI CATATG 1 cut(s) 284
Fnu4HI GCNGC 2 cut(s) 159, 326
FokI GGATG 2 cut(s) 302, 625
Fsp4HI GCNGC 2 cut(s) 159, 326
FspBI CTAG 2 cut(s) 311, 706
GlaI GCGC 1 cut(s) 168
GluI GCNGC 2 cut(s) 159, 326
HaeIII GGCC 1 cut(s) 461
HapII CCGG 1 cut(s) 264
HgaI GACGC 1 cut(s) 53
HhaI GCGC 1 cut(s) 169
Hin1I GRCGYC 1 cut(s) 427
Hin6I GCGC 1 cut(s) 167
HinP1I GCGC 1 cut(s) 167
HinfI GANTC 3 cut(s) 387, 574, 659
HpaII CCGG 1 cut(s) 264
HphI GGTGA 2 cut(s) 232, 266
Hpy166II GTNNAC 1 cut(s) 223
Hpy188I TCNGA 4 cut(s) 352, 425, 579, 635
Hpy188III TCNNGA 5 cut(s) 118, 362, 391, 502, 568
Hpy8I GTNNAC 1 cut(s) 223
Hpy99I CGWCG 1 cut(s) 69
HpyAV CCTTC 1 cut(s) 623
HpyCH4IV ACGT 1 cut(s) 427
HpyCH4V TGCA 5 cut(s) 293, 298, 320, 540, 656
HpyF10VI GCNNNNNNNGC 2 cut(s) 158, 164
HpyF3I CTNAG 2 cut(s) 422, 450
HpySE526I ACGT 1 cut(s) 427
Hsp92I GRCGYC 1 cut(s) 427
HspAI GCGC 1 cut(s) 167
Kzo9I GATC 4 cut(s) 313, 626, 666, 678
LguI GCTCTTC 1 cut(s) 132
LpnPI CCDG 8 cut(s) 73, 147, 237, 277, 290, 317, 330, 581
Lsp1109I GCAGC 2 cut(s) 170, 337
LweI GCATC 4 cut(s) 161, 280, 329, 647
MaeI CTAG 2 cut(s) 311, 706
MaeII ACGT 1 cut(s) 427
MaeIII GTNAC 1 cut(s) 428
MalI GATC 4 cut(s) 315, 628, 668, 680
MboI GATC 4 cut(s) 313, 626, 666, 678
MboII GAAGA 2 cut(s) 107, 149
MflI RGATCY 2 cut(s) 313, 678
MluCI AATT 6 cut(s) 51, 441, 517, 523, 608, 647
MnlI CCTC 5 cut(s) 358, 431, 472, 564, 566
MroXI GAANNNNTTC 1 cut(s) 612
MseI TTAA 3 cut(s) 171, 248, 515
MspA1I CMGCKG 1 cut(s) 131
MspI CCGG 1 cut(s) 264
MspR9I CCNGG 3 cut(s) 264, 265, 305
MvaI CCWGG 1 cut(s) 305
MwoI GCNNNNNNNGC 2 cut(s) 158, 164
NciI CCSGG 2 cut(s) 264, 265
NdeI CATATG 1 cut(s) 284
NdeII GATC 4 cut(s) 313, 626, 666, 678
NlaIV GGNNCC 1 cut(s) 566
NmuCI GTSAC 1 cut(s) 428
PaqCI CACCTGC 2 cut(s) 152, 586
PciSI GCTCTTC 1 cut(s) 132
PcsI WCGNNNNNNNCGW 1 cut(s) 470
PdmI GAANNNNTTC 1 cut(s) 612
PfeI GAWTC 3 cut(s) 387, 574, 659
PflFI GACNNNGTC 1 cut(s) 124
PflMI CCANNNNNTGG 1 cut(s) 688
PkrI GCNGC 2 cut(s) 160, 327
Psp6I CCWGG 1 cut(s) 303
PspGI CCWGG 1 cut(s) 303
PspN4I GGNNCC 1 cut(s) 566
PspPI GGNCC 1 cut(s) 691
PsuI RGATCY 2 cut(s) 313, 678
PsyI GACNNNGTC 1 cut(s) 124
PvuII CAGCTG 1 cut(s) 131
RsaI GTAC 1 cut(s) 341
RsaNI GTAC 1 cut(s) 340
SapI GCTCTTC 1 cut(s) 132
SaqAI TTAA 3 cut(s) 171, 248, 515
SatI GCNGC 2 cut(s) 159, 326
Sau3AI GATC 4 cut(s) 313, 626, 666, 678
Sau96I GGNCC 1 cut(s) 691
ScrFI CCNGG 3 cut(s) 264, 265, 305
SfaNI GCATC 4 cut(s) 161, 280, 329, 647
SfcI CTRYAG 1 cut(s) 147
SinI GGWCC 1 cut(s) 691
SmaI CCCGGG 1 cut(s) 265
Sse9I AATT 6 cut(s) 51, 441, 517, 523, 608, 647
SspI AATATT 1 cut(s) 43
SspMI CTAG 2 cut(s) 311, 706
StyD4I CCNGG 3 cut(s) 262, 263, 303
StyI CCWWGG 1 cut(s) 682
TaiI ACGT 1 cut(s) 430
TaqI TCGA 2 cut(s) 67, 117
TasI AATT 6 cut(s) 51, 441, 517, 523, 608, 647
TatI WGTACW 1 cut(s) 339
TfiI GAWTC 3 cut(s) 387, 574, 659
Tru1I TTAA 3 cut(s) 171, 248, 515
Tru9I TTAA 3 cut(s) 171, 248, 515
TscAI CASTG 1 cut(s) 300
TseFI GTSAC 1 cut(s) 428
TseI GCWGC 2 cut(s) 158, 325
Tsp45I GTSAC 1 cut(s) 428
TspDTI ATGAA 3 cut(s) 11, 150, 472
TspGWI ACGGA 2 cut(s) 219, 631
TspMI CCCGGG 1 cut(s) 263
TspRI CASTG 1 cut(s) 300
Tth111I GACNNNGTC 1 cut(s) 124
Van91I CCANNNNNTGG 1 cut(s) 688
VpaK11BI GGWCC 1 cut(s) 691
XapI RAATTY 4 cut(s) 441, 517, 608, 647
XmaI CCCGGG 1 cut(s) 263
XmnI GAANNNNTTC 1 cut(s) 612
XspI CTAG 2 cut(s) 311, 706
ZraI GACGTC 1 cut(s) 428
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.