Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

19716245 .. 19716679

Gene Structure 435 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 435 bp

ATGAGAAGGAAGAAACCCCAGACGCTGATGGTGATAGTAAACTTGGGACTGTTAGCTTCTGCAGCTTCTATTGGCGGATTAGTCAATAAGATGGTTGGCCGGATTGGGGACACGCCCATTATTGGTGCATGGACATATGCCAACAATCTCTGCGCAGTTTCTGCTACGGCCAAAGCCGAAGCAATTATTCGTGGCACGGTTGCAAGGGATGTGGCAGCTCTTATGGAGTTCAAAGGTGTTTCTCTCATAGAAGCAGCAGATTATGTCGCGGTCGTGGAGGAGGGTGCTCCAAAAGGAAATGTAGGGCTGGTTGCTGTGTCTGCCGTAGGTGAAGTCACCATATATGATATATGCCTTTCAATACCACCGGTATGTTTCGAGCTTGCGCTACTGAGGATCAGCCCGGGCCCTTGCCCAGCAACCAAGGATTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0004067 GO:0004175 GO:0004190 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009627 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009814 GO:0010033 GO:0010035 GO:0012505 GO:0016787 GO:0016810 GO:0016811 GO:0019538 GO:0030163 GO:0033993 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0050896 GO:0051704 GO:0051707 GO:0070001 GO:0070011 GO:0071704 GO:0097305 GO:0098542 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Asparaginase_2

Protein Analysis

145

Amino Acids

14.88

Weight (kDa)

7.57

Isoelectric Point (pI)

27.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Asparaginase_2	PF01112	14 - 114	4.5e-28	Asparaginase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	154
AccII	CGCG	1 cut(s)	269
AciI	CCGC	2 cut(s)	75, 269
AclWI	GGATC	1 cut(s)	404
AcoI	YGGCCR	2 cut(s)	97, 168
AfiI	CCNNNNNNNGG	2 cut(s)	106, 122
AgeI	ACCGGT	1 cut(s)	367
AgsI	TTSAA	2 cut(s)	232, 360
AluBI	AGCT	4 cut(s)	56, 65, 218, 382
AluI	AGCT	4 cut(s)	56, 65, 218, 382
Alw21I	GWGCWC	1 cut(s)	289
AlwI	GGATC	1 cut(s)	404
AlwNI	CAGNNNCTG	2 cut(s)	25, 161
Ama87I	CYCGRG	1 cut(s)	403
AoxI	GGCC	3 cut(s)	97, 168, 406
ApaI	GGGCCC	1 cut(s)	410
ApeKI	GCWGC	3 cut(s)	62, 215, 254
AsiGI	ACCGGT	1 cut(s)	367
AspLEI	GCGC	2 cut(s)	155, 388
AspS9I	GGNCC	2 cut(s)	406, 407
AsuC2I	CCSGG	2 cut(s)	404, 405
AsuHPI	GGTGA	3 cut(s)	43, 328, 341
AvaI	CYCGRG	1 cut(s)	403
BaeGI	GKGCMC	1 cut(s)	410
BanII	GRGCYC	1 cut(s)	410
Bbv12I	GWGCWC	1 cut(s)	289
BbvI	GCAGC	3 cut(s)	74, 227, 266
BccI	CCATC	2 cut(s)	22, 85
BceAI	ACGGC	2 cut(s)	183, 308
BcnI	CCSGG	2 cut(s)	404, 405
BfmI	CTRYAG	1 cut(s)	60
BisI	GCNGC	3 cut(s)	63, 216, 255
BlsI	GCNGC	3 cut(s)	64, 217, 256
Bme1390I	CCNGG	2 cut(s)	404, 405
BmeT110I	CYCGRG	1 cut(s)	403
BmgT120I	GGNCC	2 cut(s)	406, 407
BmiI	GGNNCC	1 cut(s)	408
BmrFI	CCNGG	2 cut(s)	404, 405
BpuMI	CCSGG	2 cut(s)	404, 405
BsaJI	CCNNGG	2 cut(s)	403, 423
BsaWI	WCCGGW	1 cut(s)	367
Bsc4I	CCNNNNNNNGG	2 cut(s)	106, 122
Bse118I	RCCGGY	1 cut(s)	367
BseDI	CCNNGG	2 cut(s)	403, 423
BseGI	GGATG	1 cut(s)	214
BseLI	CCNNNNNNNGG	2 cut(s)	106, 122
BseMII	CTCAG	1 cut(s)	383
BseRI	GAGGAG	1 cut(s)	293
BseSI	GKGCMC	1 cut(s)	410
BseXI	GCAGC	3 cut(s)	74, 227, 266
BseYI	CCCAGC	1 cut(s)	415
Bsh1236I	CGCG	1 cut(s)	269
Bsh1285I	CGRYCG	1 cut(s)	273
BshFI	GGCC	3 cut(s)	99, 170, 408
BshTI	ACCGGT	1 cut(s)	367
BsiEI	CGRYCG	1 cut(s)	273
BsiHKAI	GWGCWC	1 cut(s)	289
BsiHKCI	CYCGRG	1 cut(s)	403
BsiSI	CCGG	3 cut(s)	100, 368, 404
BslFI	GGGAC	2 cut(s)	60, 122
BslI	CCNNNNNNNGG	2 cut(s)	106, 122
BsmFI	GGGAC	2 cut(s)	60, 122
BsnI	GGCC	3 cut(s)	99, 170, 408
BsoBI	CYCGRG	1 cut(s)	403
Bsp120I	GGGCCC	1 cut(s)	406
Bsp1286I	GDGCHC	2 cut(s)	289, 410
Bsp143I	GATC	1 cut(s)	396
BspACI	CCGC	2 cut(s)	75, 269
BspANI	GGCC	3 cut(s)	99, 170, 408
BspCNI	CTCAG	1 cut(s)	384
BspFNI	CGCG	1 cut(s)	269
BspLI	GGNNCC	1 cut(s)	408
BspMAI	CTGCAG	1 cut(s)	64
BspPI	GGATC	1 cut(s)	404
BsrFI	RCCGGY	1 cut(s)	367
BssAI	RCCGGY	1 cut(s)	367
BssECI	CCNNGG	2 cut(s)	403, 423
BssMI	GATC	1 cut(s)	396
BssT1I	CCWWGG	1 cut(s)	423
Bst4CI	ACNGT	2 cut(s)	51, 199
BstAPI	GCANNNNNTGC	1 cut(s)	161
BstC8I	GCNNGC	1 cut(s)	384
BstDEI	CTNAG	1 cut(s)	392
BstF5I	GGATG	1 cut(s)	214
BstFNI	CGCG	1 cut(s)	269
BstHHI	GCGC	2 cut(s)	155, 388
BstKTI	GATC	1 cut(s)	399
BstMBI	GATC	1 cut(s)	396
BstMCI	CGRYCG	1 cut(s)	273
BstMWI	GCNNNNNNNGC	3 cut(s)	62, 161, 320
BstSCI	CCNGG	2 cut(s)	402, 403
BstSFI	CTRYAG	1 cut(s)	60
BstSLI	GKGCMC	1 cut(s)	410
BstUI	CGCG	1 cut(s)	269
BstV1I	GCAGC	3 cut(s)	74, 227, 266
BsuRI	GGCC	3 cut(s)	99, 170, 408
BtsCI	GGATG	1 cut(s)	214
Cac8I	GCNNGC	1 cut(s)	384
CaiI	CAGNNNCTG	2 cut(s)	25, 161
CfoI	GCGC	2 cut(s)	155, 388
Cfr10I	RCCGGY	1 cut(s)	367
Cfr13I	GGNCC	2 cut(s)	406, 407
Cfr9I	CCCGGG	1 cut(s)	403
CseI	GACGC	1 cut(s)	31
CspAI	ACCGGT	1 cut(s)	367
CspCI	CAANNNNNGTGG	2 cut(s)	192, 227
CviAII	CATG	1 cut(s)	129
DdeI	CTNAG	1 cut(s)	392
DpnI	GATC	1 cut(s)	398
DpnII	GATC	1 cut(s)	396
EaeI	YGGCCR	2 cut(s)	97, 168
EciI	GGCGGA	1 cut(s)	90
Eco130I	CCWWGG	1 cut(s)	423
Eco24I	GRGCYC	1 cut(s)	410
Eco88I	CYCGRG	1 cut(s)	403
EcoO109I	RGGNCCY	1 cut(s)	407
EcoT14I	CCWWGG	1 cut(s)	423
EcoT38I	GRGCYC	1 cut(s)	410
ErhI	CCWWGG	1 cut(s)	423
FaeI	CATG	1 cut(s)	132
FaqI	GGGAC	2 cut(s)	60, 122
FatI	CATG	1 cut(s)	128
FauNDI	CATATG	1 cut(s)	136
Fnu4HI	GCNGC	3 cut(s)	63, 216, 255
FokI	GGATG	1 cut(s)	221
FriOI	GRGCYC	1 cut(s)	410
Fsp4HI	GCNGC	3 cut(s)	63, 216, 255
FspI	TGCGCA	1 cut(s)	154
GlaI	GCGC	2 cut(s)	154, 387
GluI	GCNGC	3 cut(s)	63, 216, 255
GsaI	CCCAGC	1 cut(s)	419
HaeIII	GGCC	3 cut(s)	99, 170, 408
HapII	CCGG	3 cut(s)	100, 368, 404
HgaI	GACGC	1 cut(s)	31
HhaI	GCGC	2 cut(s)	155, 388
Hin1II	CATG	1 cut(s)	132
Hin6I	GCGC	2 cut(s)	153, 386
HinP1I	GCGC	2 cut(s)	153, 386
HpaII	CCGG	3 cut(s)	100, 368, 404
HphI	GGTGA	3 cut(s)	43, 328, 341
Hpy166II	GTNNAC	1 cut(s)	40
Hpy8I	GTNNAC	1 cut(s)	40
HpyCH4III	ACNGT	2 cut(s)	51, 199
HpyCH4V	TGCA	3 cut(s)	62, 128, 203
HpyF10VI	GCNNNNNNNGC	3 cut(s)	62, 161, 320
HpyF3I	CTNAG	1 cut(s)	392
Hsp92II	CATG	1 cut(s)	132
HspAI	GCGC	2 cut(s)	153, 386
Kzo9I	GATC	1 cut(s)	396
LmnI	GCTCC	1 cut(s)	292
LpnPI	CCDG	6 cut(s)	32, 113, 293, 381, 417, 429
Lsp1109I	GCAGC	3 cut(s)	74, 227, 266
MaeIII	GTNAC	1 cut(s)	334
MalI	GATC	1 cut(s)	398
MboI	GATC	1 cut(s)	396
MboII	GAAGA	1 cut(s)	22
MhlI	GDGCHC	2 cut(s)	289, 410
MluCI	AATT	1 cut(s)	183
MnlI	CCTC	3 cut(s)	271, 274, 387
MslI	CAYNNNNRTG	1 cut(s)	370
MspI	CCGG	3 cut(s)	100, 368, 404
MspR9I	CCNGG	2 cut(s)	404, 405
MvnI	CGCG	1 cut(s)	269
MwoI	GCNNNNNNNGC	3 cut(s)	62, 161, 320
NciI	CCSGG	2 cut(s)	404, 405
NdeI	CATATG	1 cut(s)	136
NdeII	GATC	1 cut(s)	396
NlaIII	CATG	1 cut(s)	132
NlaIV	GGNNCC	1 cut(s)	408
NmuCI	GTSAC	1 cut(s)	334
NsbI	TGCGCA	1 cut(s)	154
PinAI	ACCGGT	1 cut(s)	367
PkrI	GCNGC	3 cut(s)	64, 217, 256
PspFI	CCCAGC	1 cut(s)	415
PspN4I	GGNNCC	1 cut(s)	408
PspOMI	GGGCCC	1 cut(s)	406
PspPI	GGNCC	2 cut(s)	406, 407
PstI	CTGCAG	1 cut(s)	64
PstNI	CAGNNNCTG	2 cut(s)	25, 161
RseI	CAYNNNNRTG	1 cut(s)	370
SatI	GCNGC	3 cut(s)	63, 216, 255
Sau3AI	GATC	1 cut(s)	396
Sau96I	GGNCC	2 cut(s)	406, 407
ScrFI	CCNGG	2 cut(s)	404, 405
SduI	GDGCHC	2 cut(s)	289, 410
SetI	ASST	6 cut(s)	58, 67, 220, 238, 331, 384
SfcI	CTRYAG	1 cut(s)	60
SmaI	CCCGGG	1 cut(s)	405
SmiMI	CAYNNNNRTG	1 cut(s)	370
SrfI	GCCCGGGC	1 cut(s)	405
Sse9I	AATT	1 cut(s)	183
SsiI	CCGC	2 cut(s)	75, 269
StyD4I	CCNGG	2 cut(s)	402, 403
StyI	CCWWGG	1 cut(s)	423
TaaI	ACNGT	2 cut(s)	51, 199
TaqI	TCGA	1 cut(s)	378
TasI	AATT	1 cut(s)	183
TseFI	GTSAC	1 cut(s)	334
TseI	GCWGC	3 cut(s)	62, 215, 254
Tsp45I	GTSAC	1 cut(s)	334
TspMI	CCCGGG	1 cut(s)	403
XmaI	CCCGGG	1 cut(s)	403

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.