pycom15g00440

Glutathione S-transferase, N-terminal domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
N/A
Physical Location & Seq
Reverse (-)
265642 .. 266270
629 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 366 bp
ATGGCGACTCGGGTGAAGGTGTACGGACCACCGTTGTCGACGGCGGTGTCAAGATTATTGGCCTGTCTCCTTGAGAAAGGGGTGGACTATCAGCTCATTTCCGTGAACATGGCCAAAGGCGAGCACAAGAAGCCCGACTATCTCAAGATTCAGCCATTTGGACAAGTACCCGCTTTCGAAGACGAACATATCTCCCTCTTCGAATCCAGAGCCATATGCCGGTACATATGTGACAAGTATGCAGATCAGGGAAACAAGGGTTTGTACGGAATGAATCCATTGGCAAAAGCGTCAATCGATCAGTGGCTGGAGGCTGAAGGGCGAATGCAAGCTGAAGCAAGACGAGGGAGTGATAAGGCAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

122

Amino Acids

13.54

Weight (kDa)

7.69

Isoelectric Point (pI)

31.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 5 - 76 9.1e-19 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 8 - 82 3.8e-13 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 16 - 78 3.3e-13 Glutathione S-transferase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 46
AccI GTMKAC 1 cut(s) 38
AciI CCGC 2 cut(s) 44, 171
AcoI YGGCCR 1 cut(s) 111
AcuI CTGAAG 2 cut(s) 336, 354
AfaI GTAC 4 cut(s) 23, 168, 224, 266
AfiI CCNNNNNNNGG 1 cut(s) 219
AluBI AGCT 2 cut(s) 94, 332
AluI AGCT 2 cut(s) 94, 332
Alw21I GWGCWC 1 cut(s) 126
Alw26I GTCTC 1 cut(s) 71
AlwNI CAGNNNCTG 1 cut(s) 307
Ama87I CYCGRG 1 cut(s) 9
AoxI GGCC 2 cut(s) 60, 111
AspS9I GGNCC 1 cut(s) 26
AsuHPI GGTGA 1 cut(s) 25
AsuII TTCGAA 2 cut(s) 177, 201
AvaI CYCGRG 1 cut(s) 9
AvaII GGWCC 1 cut(s) 26
BaeI ACNNNNGTAYC 2 cut(s) 214, 247
BalI TGGCCA 1 cut(s) 113
BbsI GAAGAC 1 cut(s) 186
Bbv12I GWGCWC 1 cut(s) 126
BceAI ACGGC 1 cut(s) 57
BcoDI GTCTC 1 cut(s) 71
Bme18I GGWCC 1 cut(s) 26
BmeT110I CYCGRG 1 cut(s) 9
BmgT120I GGNCC 1 cut(s) 26
BpiI GAAGAC 1 cut(s) 186
BpmI CTGGAG 1 cut(s) 329
Bpu14I TTCGAA 2 cut(s) 177, 201
BpuEI CTTGAG 2 cut(s) 92, 128
Bsa29I ATCGAT 1 cut(s) 297
Bsc4I CCNNNNNNNGG 1 cut(s) 219
Bse118I RCCGGY 1 cut(s) 219
BseCI ATCGAT 1 cut(s) 297
BseLI CCNNNNNNNGG 1 cut(s) 219
BshFI GGCC 2 cut(s) 62, 113
BshVI ATCGAT 1 cut(s) 297
BsiHKAI GWGCWC 1 cut(s) 126
BsiHKCI CYCGRG 1 cut(s) 9
BsiSI CCGG 1 cut(s) 220
BslI CCNNNNNNNGG 1 cut(s) 219
BsmAI GTCTC 1 cut(s) 71
BsmI GAATGC 1 cut(s) 330
BsnI GGCC 2 cut(s) 62, 113
BsoBI CYCGRG 1 cut(s) 9
Bsp119I TTCGAA 2 cut(s) 177, 201
Bsp1286I GDGCHC 1 cut(s) 126
Bsp143I GATC 2 cut(s) 244, 298
BspACI CCGC 2 cut(s) 44, 171
BspANI GGCC 2 cut(s) 62, 113
BspDI ATCGAT 1 cut(s) 297
BspT104I TTCGAA 2 cut(s) 177, 201
BsrFI RCCGGY 1 cut(s) 219
BssAI RCCGGY 1 cut(s) 219
BssMI GATC 2 cut(s) 244, 298
Bst4CI ACNGT 1 cut(s) 33
Bst6I CTCTTC 1 cut(s) 203
BstBI TTCGAA 2 cut(s) 177, 201
BstC8I GCNNGC 2 cut(s) 122, 330
BstKTI GATC 2 cut(s) 247, 301
BstMAI GTCTC 1 cut(s) 71
BstMBI GATC 2 cut(s) 244, 298
BstMWI GCNNNNNNNGC 1 cut(s) 130
BstV2I GAAGAC 1 cut(s) 186
Bsu15I ATCGAT 1 cut(s) 297
BsuRI GGCC 2 cut(s) 62, 113
BsuTUI ATCGAT 1 cut(s) 297
BtsIMutI CAGTG 1 cut(s) 308
Cac8I GCNNGC 2 cut(s) 122, 330
CaiI CAGNNNCTG 1 cut(s) 307
Cfr10I RCCGGY 1 cut(s) 219
Cfr13I GGNCC 1 cut(s) 26
ClaI ATCGAT 1 cut(s) 297
CseI GACGC 1 cut(s) 279
Csp6I GTAC 4 cut(s) 22, 167, 223, 265
CviAII CATG 1 cut(s) 109
CviJI RGCY 9 cut(s) 62, 94, 113, 133, 154, 212, 307, 314, 332
CviKI_1 RGCY 9 cut(s) 62, 94, 113, 133, 154, 212, 307, 314, 332
CviQI GTAC 4 cut(s) 22, 167, 223, 265
DpnI GATC 2 cut(s) 246, 300
DpnII GATC 2 cut(s) 244, 298
DrdI GACNNNNNNGTC 1 cut(s) 46
DseDI GACNNNNNNGTC 1 cut(s) 46
EaeI YGGCCR 1 cut(s) 111
Eam1104I CTCTTC 1 cut(s) 203
EarI CTCTTC 1 cut(s) 203
Eco47I GGWCC 1 cut(s) 26
Eco57I CTGAAG 2 cut(s) 336, 354
Eco88I CYCGRG 1 cut(s) 9
FaeI CATG 1 cut(s) 112
FaiI YATR 7 cut(s) 110, 189, 215, 217, 227, 229, 240
FatI CATG 1 cut(s) 108
FauI CCCGC 1 cut(s) 178
FauNDI CATATG 2 cut(s) 215, 227
FblI GTMKAC 1 cut(s) 38
GsuI CTGGAG 1 cut(s) 329
HaeIII GGCC 2 cut(s) 62, 113
HapII CCGG 1 cut(s) 220
HgaI GACGC 1 cut(s) 279
Hin1II CATG 1 cut(s) 112
HincII GTYRAC 1 cut(s) 39
HindII GTYRAC 1 cut(s) 39
HinfI GANTC 4 cut(s) 7, 148, 203, 274
HpaII CCGG 1 cut(s) 220
HphI GGTGA 1 cut(s) 25
Hpy166II GTNNAC 4 cut(s) 22, 39, 85, 106
Hpy188III TCNNGA 3 cut(s) 51, 145, 207
Hpy8I GTNNAC 4 cut(s) 22, 39, 85, 106
Hpy99I CGWCG 1 cut(s) 43
HpyAV CCTTC 2 cut(s) 10, 311
HpyCH4III ACNGT 1 cut(s) 33
HpyCH4V TGCA 2 cut(s) 242, 328
HpyF10VI GCNNNNNNNGC 1 cut(s) 130
Hsp92II CATG 1 cut(s) 112
Kzo9I GATC 2 cut(s) 244, 298
LpnPI CCDG 5 cut(s) 76, 220, 233, 233, 293
MaeIII GTNAC 1 cut(s) 230
MalI GATC 2 cut(s) 246, 300
MboI GATC 2 cut(s) 244, 298
MboII GAAGA 2 cut(s) 190, 191
MhlI GDGCHC 1 cut(s) 126
MlsI TGGCCA 1 cut(s) 113
MluNI TGGCCA 1 cut(s) 113
MnlI CCTC 3 cut(s) 206, 304, 338
Mox20I TGGCCA 1 cut(s) 113
MscI TGGCCA 1 cut(s) 113
MslI CAYNNNNRTG 1 cut(s) 101
Msp20I TGGCCA 1 cut(s) 113
MspI CCGG 1 cut(s) 220
Mva1269I GAATGC 1 cut(s) 330
MwoI GCNNNNNNNGC 1 cut(s) 130
NdeI CATATG 2 cut(s) 215, 227
NdeII GATC 2 cut(s) 244, 298
NlaIII CATG 1 cut(s) 112
NmuCI GTSAC 1 cut(s) 230
NspV TTCGAA 2 cut(s) 177, 201
PctI GAATGC 1 cut(s) 330
PfeI GAWTC 3 cut(s) 148, 203, 274
PspPI GGNCC 1 cut(s) 26
PstNI CAGNNNCTG 1 cut(s) 307
RsaI GTAC 4 cut(s) 23, 168, 224, 266
RsaNI GTAC 4 cut(s) 22, 167, 223, 265
RseI CAYNNNNRTG 1 cut(s) 101
SalI GTCGAC 1 cut(s) 37
Sau3AI GATC 2 cut(s) 244, 298
Sau96I GGNCC 1 cut(s) 26
SduI GDGCHC 1 cut(s) 126
SetI ASST 3 cut(s) 21, 96, 334
SfuI TTCGAA 2 cut(s) 177, 201
SinI GGWCC 1 cut(s) 26
SmiMI CAYNNNNRTG 1 cut(s) 101
SmlI CTYRAG 2 cut(s) 71, 143
SmoI CTYRAG 2 cut(s) 71, 143
SsiI CCGC 2 cut(s) 44, 171
TaaI ACNGT 1 cut(s) 33
TaqI TCGA 4 cut(s) 38, 177, 201, 297
TfiI GAWTC 3 cut(s) 148, 203, 274
TscAI CASTG 1 cut(s) 308
TseFI GTSAC 1 cut(s) 230
Tsp45I GTSAC 1 cut(s) 230
TspDTI ATGAA 1 cut(s) 287
TspGWI ACGGA 3 cut(s) 39, 91, 282
TspRI CASTG 1 cut(s) 308
VpaK11BI GGWCC 1 cut(s) 26
XmiI GTMKAC 1 cut(s) 38
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.