pycom15g07100

Receptor protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
N/A
Physical Location & Seq
Reverse (-)
4341691 .. 4342185
495 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 375 bp
ATGGTTGTGAGCCCGAATTTAACTTCAAAGGGTTCCAATACTCTCGCATTCCTTGGCAGACCGAGTTATAGTTGTTACCGTAAGACAACGTTGCTCAATGGACACAGAAATTATGTGAAAAGCAGTGTAGCTGGTCCAGTGAATTTCCTGCTCTGGTTTGCTATTGGAGTTGGCGGGTTTGAGGTCGTTTTTGTCCTTTTGGTTTGGGGCTTGTTAAGTATTACTACCCGGCGAGATTCCAATGAGGATATATGCAGGGGAACGTTCTTGCTGCATGGGTTCAAAAGATTCAGCTATGCCGAGCTCAAGAAGGCGACACATGGTTTTAGTGAAGAGATTGGCAGGTGGAATAGTGTACAAAGGTGTATTGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

125

Amino Acids

13.87

Weight (kDa)

9.88

Isoelectric Point (pI)

38.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 333
Acc36I ACCTGC 1 cut(s) 333
AciI CCGC 1 cut(s) 174
AclI AACGTT 2 cut(s) 89, 263
AcsI RAATTY 2 cut(s) 16, 142
AfaI GTAC 1 cut(s) 357
AgsI TTSAA 2 cut(s) 27, 283
AluBI AGCT 3 cut(s) 131, 294, 304
AluI AGCT 3 cut(s) 131, 294, 304
Alw21I GWGCWC 1 cut(s) 306
ApeKI GCWGC 1 cut(s) 271
ApoI RAATTY 2 cut(s) 16, 142
AspS9I GGNCC 1 cut(s) 134
AsuC2I CCSGG 1 cut(s) 229
AvaII GGWCC 1 cut(s) 134
BanII GRGCYC 2 cut(s) 14, 306
Bbv12I GWGCWC 1 cut(s) 306
BbvI GCAGC 1 cut(s) 258
BcnI CCSGG 1 cut(s) 229
BfuAI ACCTGC 1 cut(s) 333
BisI GCNGC 1 cut(s) 272
BlsI GCNGC 1 cut(s) 273
Bme1390I CCNGG 1 cut(s) 229
Bme18I GGWCC 1 cut(s) 134
BmgT120I GGNCC 1 cut(s) 134
BmiI GGNNCC 1 cut(s) 34
BmrFI CCNGG 1 cut(s) 229
BpuEI CTTGAG 1 cut(s) 290
BpuMI CCSGG 1 cut(s) 229
BsaJI CCNNGG 1 cut(s) 52
Bse1I ACTGG 1 cut(s) 137
BseDI CCNNGG 1 cut(s) 52
BseNI ACTGG 1 cut(s) 137
BseXI GCAGC 1 cut(s) 258
BsiHKAI GWGCWC 1 cut(s) 306
BsiSI CCGG 1 cut(s) 229
BsmI GAATGC 1 cut(s) 47
Bsp1286I GDGCHC 2 cut(s) 14, 306
Bsp1407I TGTACA 1 cut(s) 355
BspACI CCGC 1 cut(s) 174
BspLI GGNNCC 1 cut(s) 34
BspMI ACCTGC 1 cut(s) 333
BsrGI TGTACA 1 cut(s) 355
BsrI ACTGG 1 cut(s) 137
BssECI CCNNGG 1 cut(s) 52
BssT1I CCWWGG 1 cut(s) 52
Bst4CI ACNGT 1 cut(s) 80
Bst6I CTCTTC 1 cut(s) 327
BstAUI TGTACA 1 cut(s) 355
BstSCI CCNGG 1 cut(s) 227
BstV1I GCAGC 1 cut(s) 258
BtsI GCAGTG 1 cut(s) 130
BtsIMutI CAGTG 2 cut(s) 130, 144
BveI ACCTGC 1 cut(s) 333
Cfr13I GGNCC 1 cut(s) 134
Csp6I GTAC 1 cut(s) 356
CviAII CATG 2 cut(s) 275, 320
CviJI RGCY 6 cut(s) 12, 131, 210, 294, 304, 372
CviKI_1 RGCY 6 cut(s) 12, 131, 210, 294, 304, 372
CviQI GTAC 1 cut(s) 356
Eam1104I CTCTTC 1 cut(s) 327
EarI CTCTTC 1 cut(s) 327
Ecl136II GAGCTC 1 cut(s) 304
Eco130I CCWWGG 1 cut(s) 52
Eco24I GRGCYC 2 cut(s) 14, 306
Eco47I GGWCC 1 cut(s) 134
Eco53kI GAGCTC 1 cut(s) 304
EcoICRI GAGCTC 1 cut(s) 304
EcoT14I CCWWGG 1 cut(s) 52
EcoT38I GRGCYC 2 cut(s) 14, 306
ErhI CCWWGG 1 cut(s) 52
FaeI CATG 2 cut(s) 278, 323
FaiI YATR 7 cut(s) 69, 114, 251, 253, 276, 297, 321
FatI CATG 2 cut(s) 274, 319
FauI CCCGC 1 cut(s) 167
Fnu4HI GCNGC 1 cut(s) 272
FriOI GRGCYC 2 cut(s) 14, 306
Fsp4HI GCNGC 1 cut(s) 272
GluI GCNGC 1 cut(s) 272
HapII CCGG 1 cut(s) 229
Hin1II CATG 2 cut(s) 278, 323
HinfI GANTC 2 cut(s) 236, 288
HpaII CCGG 1 cut(s) 229
Hpy166II GTNNAC 1 cut(s) 356
Hpy188III TCNNGA 1 cut(s) 307
Hpy8I GTNNAC 1 cut(s) 356
HpyAV CCTTC 1 cut(s) 304
HpyCH4III ACNGT 1 cut(s) 80
HpyCH4IV ACGT 2 cut(s) 89, 263
HpyCH4V TGCA 2 cut(s) 255, 274
HpySE526I ACGT 2 cut(s) 89, 263
Hsp92II CATG 2 cut(s) 278, 323
LpnPI CCDG 7 cut(s) 117, 139, 150, 161, 241, 242, 328
Lsp1109I GCAGC 1 cut(s) 258
MaeII ACGT 2 cut(s) 89, 263
MaeIII GTNAC 1 cut(s) 74
MboII GAAGA 1 cut(s) 344
MhlI GDGCHC 2 cut(s) 14, 306
MluCI AATT 3 cut(s) 16, 109, 142
MnlI CCTC 2 cut(s) 175, 238
MseI TTAA 2 cut(s) 20, 215
MspI CCGG 1 cut(s) 229
MspR9I CCNGG 1 cut(s) 229
Mva1269I GAATGC 1 cut(s) 47
NciI CCSGG 1 cut(s) 229
NlaIII CATG 2 cut(s) 278, 323
NlaIV GGNNCC 1 cut(s) 34
NmeAIII GCCGAG 1 cut(s) 325
PaqCI CACCTGC 1 cut(s) 333
PctI GAATGC 1 cut(s) 47
PfeI GAWTC 2 cut(s) 236, 288
PkrI GCNGC 1 cut(s) 273
Psp124BI GAGCTC 1 cut(s) 306
Psp1406I AACGTT 2 cut(s) 89, 263
PspN4I GGNNCC 1 cut(s) 34
PspPI GGNCC 1 cut(s) 134
RsaI GTAC 1 cut(s) 357
RsaNI GTAC 1 cut(s) 356
SacI GAGCTC 1 cut(s) 306
SaqAI TTAA 2 cut(s) 20, 215
SatI GCNGC 1 cut(s) 272
Sau96I GGNCC 1 cut(s) 134
ScrFI CCNGG 1 cut(s) 229
SduI GDGCHC 2 cut(s) 14, 306
SetI ASST 8 cut(s) 92, 133, 186, 266, 296, 306, 347, 365
SinI GGWCC 1 cut(s) 134
SmlI CTYRAG 1 cut(s) 305
SmoI CTYRAG 1 cut(s) 305
Sse9I AATT 3 cut(s) 16, 109, 142
SsiI CCGC 1 cut(s) 174
SstI GAGCTC 1 cut(s) 306
StyD4I CCNGG 1 cut(s) 227
StyI CCWWGG 1 cut(s) 52
TaaI ACNGT 1 cut(s) 80
TaiI ACGT 2 cut(s) 92, 266
TaqII GACCGA 1 cut(s) 76
TasI AATT 3 cut(s) 16, 109, 142
TatI WGTACW 1 cut(s) 355
TfiI GAWTC 2 cut(s) 236, 288
Tru1I TTAA 2 cut(s) 20, 215
Tru9I TTAA 2 cut(s) 20, 215
TscAI CASTG 2 cut(s) 130, 144
TseI GCWGC 1 cut(s) 271
TspRI CASTG 2 cut(s) 130, 144
VpaK11BI GGWCC 1 cut(s) 134
XapI RAATTY 2 cut(s) 16, 142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.