pycom15g07830

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
N/A
Physical Location & Seq
Reverse (-)
4830149 .. 4830580
432 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 432 bp
ATGGATGAACTGTATAGGGCGGACCCTCCAAAGGTTTTTACGATACATTACGTGGGGTGGAAACCATGGCTTTGTTATAGGGATTATGATTGTAATTGGAACGTGGAGGGATTTCGTGTCTACGCGACTGACGTAGTGCACGAGCGGTGGTGGAAGGTTTACGACACGGTGGACGAGCGGTTGCAGAGGTTTTGTGGGTTGACGAAGGAGAGGAAAGGTAATTTGGAGTGGGCACTAAGTAAGGCGAGAGAATTAGGGTTTCCAGATGAACATTGGAAGATAAATATCACGGATCCTAGACGAGAACATTTGGTGGCAGTGGCGAAGTCAGGATTTACCGAGGGGAGGGGCGAAATTCAAAAAAATGCAAGGTTCAATCGAAGTGGTTGCTTTCACATTGGAGAGTGCAAAGTTTTGAGTCAATATTCATAA

Protein Analysis

144

Amino Acids

17.06

Weight (kDa)

8.26

Isoelectric Point (pI)

32.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 145, 178
AccI GTMKAC 1 cut(s) 120
AccII CGCG 1 cut(s) 125
AciI CCGC 3 cut(s) 20, 145, 178
AclWI GGATC 2 cut(s) 287, 300
AcsI RAATTY 1 cut(s) 354
AfiI CCNNNNNNNGG 2 cut(s) 31, 345
AgsI TTSAA 2 cut(s) 359, 376
AjuI GAANNNNNNNTTGG 2 cut(s) 206, 238
Alw21I GWGCWC 1 cut(s) 141
Alw44I GTGCAC 1 cut(s) 137
AlwI GGATC 2 cut(s) 287, 300
ApaLI GTGCAC 1 cut(s) 137
ApoI RAATTY 1 cut(s) 354
AspS9I GGNCC 1 cut(s) 22
AvaII GGWCC 1 cut(s) 22
BaeGI GKGCMC 2 cut(s) 141, 235
BamHI GGATCC 1 cut(s) 292
BauI CACGAG 1 cut(s) 140
Bbv12I GWGCWC 1 cut(s) 141
BcgI CGANNNNNNTGC 2 cut(s) 369, 403
BfaI CTAG 1 cut(s) 297
Bme18I GGWCC 1 cut(s) 22
BmgT120I GGNCC 1 cut(s) 22
BmiI GGNNCC 2 cut(s) 24, 294
BsaAI YACGTR 1 cut(s) 52
BsaBI GATNNNNATC 1 cut(s) 284
BsaJI CCNNGG 2 cut(s) 65, 339
Bsc4I CCNNNNNNNGG 2 cut(s) 31, 345
Bse8I GATNNNNATC 1 cut(s) 284
BseDI CCNNGG 2 cut(s) 65, 339
BseGI GGATG 1 cut(s) 10
BseJI GATNNNNATC 1 cut(s) 284
BseLI CCNNNNNNNGG 2 cut(s) 31, 345
BseSI GKGCMC 2 cut(s) 141, 235
Bsh1236I CGCG 1 cut(s) 125
BsiHKAI GWGCWC 1 cut(s) 141
BslI CCNNNNNNNGG 2 cut(s) 31, 345
Bsp1286I GDGCHC 2 cut(s) 141, 235
Bsp143I GATC 1 cut(s) 292
Bsp19I CCATGG 1 cut(s) 65
BspACI CCGC 3 cut(s) 20, 145, 178
BspFNI CGCG 1 cut(s) 125
BspLI GGNNCC 2 cut(s) 24, 294
BspPI GGATC 2 cut(s) 287, 300
BsrBI CCGCTC 2 cut(s) 145, 178
BssECI CCNNGG 2 cut(s) 65, 339
BssMI GATC 1 cut(s) 292
BssSI CACGAG 1 cut(s) 140
BssT1I CCWWGG 1 cut(s) 65
Bst2BI CACGAG 1 cut(s) 140
Bst4CI ACNGT 2 cut(s) 12, 169
BstBAI YACGTR 1 cut(s) 52
BstDEI CTNAG 1 cut(s) 236
BstDSI CCRYGG 1 cut(s) 65
BstF5I GGATG 1 cut(s) 10
BstFNI CGCG 1 cut(s) 125
BstKTI GATC 1 cut(s) 295
BstMBI GATC 1 cut(s) 292
BstSLI GKGCMC 2 cut(s) 141, 235
BstUI CGCG 1 cut(s) 125
BstX2I RGATCY 1 cut(s) 292
BstYI RGATCY 1 cut(s) 292
BtgI CCRYGG 1 cut(s) 65
BtsCI GGATG 1 cut(s) 10
BtsI GCAGTG 1 cut(s) 324
BtsIMutI CAGTG 1 cut(s) 324
Cfr13I GGNCC 1 cut(s) 22
CspCI CAANNNNNGTGG 2 cut(s) 364, 399
CviAII CATG 1 cut(s) 66
CviJI RGCY 1 cut(s) 70
CviKI_1 RGCY 1 cut(s) 70
DdeI CTNAG 1 cut(s) 236
DpnI GATC 1 cut(s) 294
DpnII GATC 1 cut(s) 292
EciI GGCGGA 1 cut(s) 35
Eco130I CCWWGG 1 cut(s) 65
Eco47I GGWCC 1 cut(s) 22
EcoT14I CCWWGG 1 cut(s) 65
ErhI CCWWGG 1 cut(s) 65
FaeI CATG 1 cut(s) 69
FaiI YATR 5 cut(s) 15, 67, 78, 87, 430
FatI CATG 1 cut(s) 65
FblI GTMKAC 1 cut(s) 120
FokI GGATG 1 cut(s) 17
FspBI CTAG 1 cut(s) 297
Hin1II CATG 1 cut(s) 69
HincII GTYRAC 1 cut(s) 201
HindII GTYRAC 1 cut(s) 201
HinfI GANTC 1 cut(s) 418
Hpy166II GTNNAC 5 cut(s) 121, 139, 160, 172, 201
Hpy188III TCNNGA 2 cut(s) 263, 330
Hpy8I GTNNAC 5 cut(s) 121, 139, 160, 172, 201
HpyAV CCTTC 2 cut(s) 148, 199
HpyCH4III ACNGT 2 cut(s) 12, 169
HpyCH4IV ACGT 3 cut(s) 51, 102, 132
HpyCH4V TGCA 4 cut(s) 139, 184, 368, 408
HpyF3I CTNAG 1 cut(s) 236
HpySE526I ACGT 3 cut(s) 51, 102, 132
Hsp92II CATG 1 cut(s) 69
Kzo9I GATC 1 cut(s) 292
LpnPI CCDG 2 cut(s) 276, 315
MaeI CTAG 1 cut(s) 297
MaeII ACGT 3 cut(s) 51, 102, 132
MalI GATC 1 cut(s) 294
MbiI CCGCTC 2 cut(s) 145, 178
MboI GATC 1 cut(s) 292
MboII GAAGA 1 cut(s) 289
MflI RGATCY 1 cut(s) 292
MhlI GDGCHC 2 cut(s) 141, 235
MluCI AATT 4 cut(s) 94, 220, 251, 354
MlyI GAGTC 1 cut(s) 427
MnlI CCTC 6 cut(s) 36, 100, 180, 204, 334, 339
MvnI CGCG 1 cut(s) 125
NcoI CCATGG 1 cut(s) 65
NdeII GATC 1 cut(s) 292
NlaIII CATG 1 cut(s) 69
NlaIV GGNNCC 2 cut(s) 24, 294
PcsI WCGNNNNNNNCGW 2 cut(s) 129, 138
PleI GAGTC 1 cut(s) 426
PpsI GAGTC 1 cut(s) 426
Ppu21I YACGTR 1 cut(s) 52
PspN4I GGNNCC 2 cut(s) 24, 294
PspPI GGNCC 1 cut(s) 22
PsuI RGATCY 1 cut(s) 292
Sau3AI GATC 1 cut(s) 292
Sau96I GGNCC 1 cut(s) 22
SchI GAGTC 1 cut(s) 427
SduI GDGCHC 2 cut(s) 141, 235
SetI ASST 8 cut(s) 36, 54, 105, 135, 159, 191, 220, 374
SinI GGWCC 1 cut(s) 22
Sse9I AATT 4 cut(s) 94, 220, 251, 354
SsiI CCGC 3 cut(s) 20, 145, 178
SspI AATATT 1 cut(s) 425
SspMI CTAG 1 cut(s) 297
StyI CCWWGG 1 cut(s) 65
TaaI ACNGT 2 cut(s) 12, 169
TaiI ACGT 3 cut(s) 54, 105, 135
TaqI TCGA 1 cut(s) 379
TasI AATT 4 cut(s) 94, 220, 251, 354
TscAI CASTG 1 cut(s) 324
TspDTI ATGAA 3 cut(s) 21, 282, 417
TspGWI ACGGA 1 cut(s) 305
TspRI CASTG 1 cut(s) 324
VneI GTGCAC 1 cut(s) 137
VpaK11BI GGWCC 1 cut(s) 22
XapI RAATTY 1 cut(s) 354
XcmI CCANNNNNNNNNTGG 1 cut(s) 270
XmiI GTMKAC 1 cut(s) 120
XspI CTAG 1 cut(s) 297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.