pycom15g10090

Belongs to the peptidase C19 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
N/A
Physical Location & Seq
Forward (+)
6580145 .. 6580628
484 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 261 bp
ATGATGATATGGGAATCTTTTGGCATTGTTAAGGAAAACCAGGGACTTCACAAAGGTACTCGGGTCGTTGAGGATGAATCTGCTACTCTTGCAGACATGAATATATTCCCCGGGGATAGACTTTGGGTGAACGATTCAGAAATCCATGAGAACCGAGATATTGCTGATGAGCTATCTGACCAGAAAATGGATGTGCAACACACCGAAGAGGGTTTTCGTGGGACGCTGTTGACAGCAAATGTTTCATCCCAAGTTGTTTAG

Protein Analysis

87

Amino Acids

9.73

Weight (kDa)

4.43

Isoelectric Point (pI)

38.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 187
AfaI GTAC 1 cut(s) 58
AfiI CCNNNNNNNGG 1 cut(s) 187
AjnI CCWGG 1 cut(s) 39
AluBI AGCT 1 cut(s) 172
AluI AGCT 1 cut(s) 172
Ama87I CYCGRG 2 cut(s) 60, 110
Asp700I GAANNNNTTC 1 cut(s) 104
AsuC2I CCSGG 2 cut(s) 111, 112
AsuHPI GGTGA 1 cut(s) 139
AvaI CYCGRG 2 cut(s) 60, 110
BaeI ACNNNNGTAYC 2 cut(s) 48, 81
BciT130I CCWGG 1 cut(s) 41
BcnI CCSGG 2 cut(s) 111, 112
Bme1390I CCNGG 3 cut(s) 41, 111, 112
BmeT110I CYCGRG 2 cut(s) 60, 110
BmrFI CCNGG 3 cut(s) 41, 111, 112
BpuMI CCSGG 2 cut(s) 111, 112
BsaJI CCNNGG 4 cut(s) 40, 109, 110, 111
Bsc4I CCNNNNNNNGG 1 cut(s) 187
BseBI CCWGG 1 cut(s) 41
BseDI CCNNGG 4 cut(s) 40, 109, 110, 111
BseGI GGATG 3 cut(s) 79, 196, 245
BseLI CCNNNNNNNGG 1 cut(s) 187
BsiHKCI CYCGRG 2 cut(s) 60, 110
BsiSI CCGG 1 cut(s) 111
BslFI GGGAC 2 cut(s) 57, 235
BslI CCNNNNNNNGG 1 cut(s) 187
BsmFI GGGAC 2 cut(s) 57, 235
BsoBI CYCGRG 2 cut(s) 60, 110
BssECI CCNNGG 4 cut(s) 40, 109, 110, 111
Bst2UI CCWGG 1 cut(s) 41
Bst6I CTCTTC 1 cut(s) 201
BstF5I GGATG 3 cut(s) 79, 196, 245
BstMWI GCNNNNNNNGC 1 cut(s) 89
BstNI CCWGG 1 cut(s) 41
BstSCI CCNGG 3 cut(s) 39, 109, 110
BtsCI GGATG 3 cut(s) 79, 196, 245
Cfr9I CCCGGG 1 cut(s) 110
CseI GACGC 1 cut(s) 232
Csp6I GTAC 1 cut(s) 57
CviAII CATG 2 cut(s) 97, 146
CviJI RGCY 1 cut(s) 172
CviKI_1 RGCY 1 cut(s) 172
CviQI GTAC 1 cut(s) 57
Eam1104I CTCTTC 1 cut(s) 201
EarI CTCTTC 1 cut(s) 201
Eco88I CYCGRG 2 cut(s) 60, 110
EcoRII CCWGG 1 cut(s) 39
FaeI CATG 2 cut(s) 100, 149
FaiI YATR 4 cut(s) 10, 98, 104, 147
FaqI GGGAC 2 cut(s) 57, 235
FatI CATG 2 cut(s) 96, 145
FokI GGATG 3 cut(s) 86, 203, 232
HapII CCGG 1 cut(s) 111
HgaI GACGC 1 cut(s) 232
Hin1II CATG 2 cut(s) 100, 149
HincII GTYRAC 1 cut(s) 231
HindII GTYRAC 1 cut(s) 231
HinfI GANTC 3 cut(s) 14, 77, 134
HpaII CCGG 1 cut(s) 111
HphI GGTGA 1 cut(s) 139
Hpy166II GTNNAC 2 cut(s) 130, 231
Hpy188I TCNGA 2 cut(s) 139, 178
Hpy8I GTNNAC 2 cut(s) 130, 231
HpyCH4V TGCA 2 cut(s) 92, 196
HpyF10VI GCNNNNNNNGC 1 cut(s) 89
Hsp92II CATG 2 cut(s) 100, 149
LpnPI CCDG 4 cut(s) 26, 53, 124, 194
MboII GAAGA 1 cut(s) 218
MnlI CCTC 2 cut(s) 64, 202
MroXI GAANNNNTTC 1 cut(s) 104
MseI TTAA 1 cut(s) 30
MspI CCGG 1 cut(s) 111
MspR9I CCNGG 3 cut(s) 41, 111, 112
MvaI CCWGG 1 cut(s) 41
MwoI GCNNNNNNNGC 1 cut(s) 89
NciI CCSGG 2 cut(s) 111, 112
NlaIII CATG 2 cut(s) 100, 149
PdmI GAANNNNTTC 1 cut(s) 104
PfeI GAWTC 3 cut(s) 14, 77, 134
PflMI CCANNNNNTGG 1 cut(s) 187
Psp6I CCWGG 1 cut(s) 39
PspGI CCWGG 1 cut(s) 39
RsaI GTAC 1 cut(s) 58
RsaNI GTAC 1 cut(s) 57
SaqAI TTAA 1 cut(s) 30
ScrFI CCNGG 3 cut(s) 41, 111, 112
SetI ASST 2 cut(s) 58, 174
SmaI CCCGGG 1 cut(s) 112
StyD4I CCNGG 3 cut(s) 39, 109, 110
TfiI GAWTC 3 cut(s) 14, 77, 134
Tru1I TTAA 1 cut(s) 30
Tru9I TTAA 1 cut(s) 30
TspDTI ATGAA 3 cut(s) 90, 113, 234
TspMI CCCGGG 1 cut(s) 110
Van91I CCANNNNNTGG 1 cut(s) 187
XmaI CCCGGG 1 cut(s) 110
XmnI GAANNNNTTC 1 cut(s) 104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.