pycom15g15260

DNA repair helicase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
N/A
Physical Location & Seq
Forward (+)
10612972 .. 10613309
338 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 237 bp
ATGGGTGAAATTGGAGCTGGTCCCAGTGATTTGCTAAATGAAGCGAAACTAGCAGTTGCGGCTAAAGAAAAAGAAACTCATGCATTTGAAATTAATCCTTCACAGGTTGATCGAGAAATCGGTTTTGGAGCTTGGTATCAAAACAAAAGCAGACATGGCCGAAGGGGGAATTGGGAATGGGGAAATGGGGAGGTGGGATCTGAAGTGGCAAGGGAATGGGAAATGGGAAATTTTTAG

Protein Analysis

79

Amino Acids

8.7

Weight (kDa)

5.09

Isoelectric Point (pI)

15.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 59
AclWI GGATC 1 cut(s) 205
AcoI YGGCCR 1 cut(s) 157
AcsI RAATTY 1 cut(s) 229
AcuI CTGAAG 1 cut(s) 222
AgsI TTSAA 1 cut(s) 89
AjuI GAANNNNNNNTTGG 4 cut(s) 108, 140, 154, 186
AluBI AGCT 2 cut(s) 17, 131
AluI AGCT 2 cut(s) 17, 131
AlwI GGATC 1 cut(s) 205
AoxI GGCC 1 cut(s) 157
ApoI RAATTY 1 cut(s) 229
AseI ATTAAT 1 cut(s) 93
AspS9I GGNCC 1 cut(s) 20
AsuHPI GGTGA 1 cut(s) 17
AvaII GGWCC 1 cut(s) 20
BfaI CTAG 1 cut(s) 50
BisI GCNGC 1 cut(s) 60
BlsI GCNGC 1 cut(s) 61
Bme18I GGWCC 1 cut(s) 20
BmgT120I GGNCC 1 cut(s) 20
BmiI GGNNCC 1 cut(s) 22
BmrI ACTGGG 1 cut(s) 18
BmuI ACTGGG 1 cut(s) 18
Bse1I ACTGG 1 cut(s) 24
BseNI ACTGG 1 cut(s) 24
BshFI GGCC 1 cut(s) 159
BslFI GGGAC 1 cut(s) 6
BsmFI GGGAC 1 cut(s) 6
BsnI GGCC 1 cut(s) 159
Bsp143I GATC 2 cut(s) 109, 197
BspACI CCGC 1 cut(s) 59
BspANI GGCC 1 cut(s) 159
BspLI GGNNCC 1 cut(s) 22
BspPI GGATC 1 cut(s) 205
BsrI ACTGG 1 cut(s) 24
BssMI GATC 2 cut(s) 109, 197
BstKTI GATC 2 cut(s) 112, 200
BstMBI GATC 2 cut(s) 109, 197
BstMWI GCNNNNNNNGC 3 cut(s) 50, 59, 156
BstX2I RGATCY 1 cut(s) 197
BstYI RGATCY 1 cut(s) 197
BsuRI GGCC 1 cut(s) 159
BtsIMutI CAGTG 1 cut(s) 31
Cfr13I GGNCC 1 cut(s) 20
CviAII CATG 2 cut(s) 80, 155
CviJI RGCY 4 cut(s) 17, 62, 131, 159
CviKI_1 RGCY 4 cut(s) 17, 62, 131, 159
DpnI GATC 2 cut(s) 111, 199
DpnII GATC 2 cut(s) 109, 197
EaeI YGGCCR 1 cut(s) 157
Eco47I GGWCC 1 cut(s) 20
Eco57I CTGAAG 1 cut(s) 222
EcoT22I ATGCAT 1 cut(s) 85
FaeI CATG 2 cut(s) 83, 158
FaiI YATR 2 cut(s) 81, 156
FaqI GGGAC 1 cut(s) 6
FatI CATG 2 cut(s) 79, 154
Fnu4HI GCNGC 1 cut(s) 60
Fsp4HI GCNGC 1 cut(s) 60
FspBI CTAG 1 cut(s) 50
GluI GCNGC 1 cut(s) 60
HaeIII GGCC 1 cut(s) 159
Hin1II CATG 2 cut(s) 83, 158
HphI GGTGA 1 cut(s) 17
Hpy188I TCNGA 1 cut(s) 202
Hpy188III TCNNGA 1 cut(s) 113
HpyAV CCTTC 2 cut(s) 108, 156
HpyCH4V TGCA 1 cut(s) 83
HpyF10VI GCNNNNNNNGC 3 cut(s) 50, 59, 156
Hsp92II CATG 2 cut(s) 83, 158
Kzo9I GATC 2 cut(s) 109, 197
LmnI GCTCC 2 cut(s) 14, 128
LpnPI CCDG 3 cut(s) 3, 37, 89
MaeI CTAG 1 cut(s) 50
MalI GATC 2 cut(s) 111, 199
MboI GATC 2 cut(s) 109, 197
MflI RGATCY 1 cut(s) 197
MluCI AATT 4 cut(s) 9, 90, 169, 229
MnlI CCTC 1 cut(s) 184
Mph1103I ATGCAT 1 cut(s) 85
MseI TTAA 1 cut(s) 93
MwoI GCNNNNNNNGC 3 cut(s) 50, 59, 156
NdeII GATC 2 cut(s) 109, 197
NlaIII CATG 2 cut(s) 83, 158
NlaIV GGNNCC 1 cut(s) 22
NsiI ATGCAT 1 cut(s) 85
PkrI GCNGC 1 cut(s) 61
PshBI ATTAAT 1 cut(s) 93
PspN4I GGNNCC 1 cut(s) 22
PspPI GGNCC 1 cut(s) 20
PsuI RGATCY 1 cut(s) 197
SaqAI TTAA 1 cut(s) 93
SatI GCNGC 1 cut(s) 60
Sau3AI GATC 2 cut(s) 109, 197
Sau96I GGNCC 1 cut(s) 20
SetI ASST 4 cut(s) 19, 108, 133, 195
SgeI CNNG 9 cut(s) 30, 36, 62, 92, 116, 125, 144, 167, 222
SinI GGWCC 1 cut(s) 20
Sse9I AATT 4 cut(s) 9, 90, 169, 229
SsiI CCGC 1 cut(s) 59
SspMI CTAG 1 cut(s) 50
TaqI TCGA 1 cut(s) 112
TasI AATT 4 cut(s) 9, 90, 169, 229
TauI GCSGC 1 cut(s) 62
Tru1I TTAA 1 cut(s) 93
Tru9I TTAA 1 cut(s) 93
TscAI CASTG 1 cut(s) 31
TspDTI ATGAA 1 cut(s) 54
TspRI CASTG 1 cut(s) 31
VpaK11BI GGWCC 1 cut(s) 20
VspI ATTAAT 1 cut(s) 93
XapI RAATTY 1 cut(s) 229
XspI CTAG 1 cut(s) 50
Zsp2I ATGCAT 1 cut(s) 85
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.