pycom15g15620

Signal peptidase complex catalytic subunit

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
N/A
Physical Location & Seq
Forward (+)
10891733 .. 10892298
566 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 291 bp
ATGGGGGTGGTTCGGGGAGACCCTGGACTCCATCAAGTCCATTCAGATCAGACAAGCTCTCTCCCAAGCCCTCACTATCGGTCCGTATATGTATACCACACATTTAAATATCTATGTGGGTTGATATGTGGGAGTGAATCGCCTGTGGGGGTTGTACTATCTGAAAGCATGGAGCCTGGCTTTGCAAGGGGATTTAAGTTAAATTTGGCATGTAGATTGTGCATTTTACTTGGTTTGAACAATTACTCACTGTGTTTTAAAACTGAAAGTTTACAAGTGATACCACAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

97

Amino Acids

10.56

Weight (kDa)

7.67

Isoelectric Point (pI)

50.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 93
AcsI RAATTY 1 cut(s) 202
AfaI GTAC 1 cut(s) 156
AgsI TTSAA 1 cut(s) 238
AjnI CCWGG 2 cut(s) 22, 175
AluBI AGCT 1 cut(s) 57
AluI AGCT 1 cut(s) 57
Alw26I GTCTC 1 cut(s) 12
ApoI RAATTY 1 cut(s) 202
AspS9I GGNCC 1 cut(s) 81
AvaII GGWCC 1 cut(s) 81
BaeI ACNNNNGTAYC 1 cut(s) 272
BccI CCATC 1 cut(s) 39
BciT130I CCWGG 2 cut(s) 24, 177
BcoDI GTCTC 1 cut(s) 12
Bme1390I CCNGG 2 cut(s) 24, 177
Bme18I GGWCC 1 cut(s) 81
BmgT120I GGNCC 1 cut(s) 81
BmiI GGNNCC 1 cut(s) 174
BmrFI CCNGG 2 cut(s) 24, 177
BsaI GGTCTC 1 cut(s) 12
BsaJI CCNNGG 1 cut(s) 22
BseBI CCWGG 2 cut(s) 24, 177
BseDI CCNNGG 1 cut(s) 22
BsmAI GTCTC 1 cut(s) 12
Bso31I GGTCTC 1 cut(s) 12
Bsp143I GATC 1 cut(s) 46
BspLI GGNNCC 1 cut(s) 174
BspTNI GGTCTC 1 cut(s) 12
BssECI CCNNGG 1 cut(s) 22
BssMI GATC 1 cut(s) 46
BssNAI GTATAC 1 cut(s) 94
Bst1107I GTATAC 1 cut(s) 94
Bst2UI CCWGG 2 cut(s) 24, 177
Bst4CI ACNGT 2 cut(s) 252, 288
BstKTI GATC 1 cut(s) 49
BstMAI GTCTC 1 cut(s) 12
BstMBI GATC 1 cut(s) 46
BstNI CCWGG 2 cut(s) 24, 177
BstNSI RCATGY 1 cut(s) 213
BstSCI CCNGG 2 cut(s) 22, 175
BstZ17I GTATAC 1 cut(s) 94
BtsIMutI CAGTG 1 cut(s) 248
Cfr13I GGNCC 1 cut(s) 81
CpoI CGGWCCG 1 cut(s) 81
Csp6I GTAC 1 cut(s) 155
CspI CGGWCCG 1 cut(s) 81
CviAII CATG 2 cut(s) 169, 210
CviJI RGCY 4 cut(s) 57, 69, 175, 180
CviKI_1 RGCY 4 cut(s) 57, 69, 175, 180
CviQI GTAC 1 cut(s) 155
DpnI GATC 1 cut(s) 48
DpnII GATC 1 cut(s) 46
DraI TTTAAA 2 cut(s) 106, 259
Eco31I GGTCTC 1 cut(s) 12
Eco47I GGWCC 1 cut(s) 81
EcoRII CCWGG 2 cut(s) 22, 175
FaeI CATG 2 cut(s) 172, 213
FaiI YATR 7 cut(s) 88, 90, 94, 115, 127, 170, 211
FatI CATG 2 cut(s) 168, 209
FblI GTMKAC 1 cut(s) 93
Hin1II CATG 2 cut(s) 172, 213
HinfI GANTC 2 cut(s) 27, 137
Hpy166II GTNNAC 2 cut(s) 94, 272
Hpy188I TCNGA 3 cut(s) 46, 51, 163
Hpy8I GTNNAC 2 cut(s) 94, 272
HpyCH4III ACNGT 2 cut(s) 252, 288
HpyCH4V TGCA 2 cut(s) 185, 222
Hsp92II CATG 2 cut(s) 172, 213
Kzo9I GATC 1 cut(s) 46
LmnI GCTCC 1 cut(s) 172
LpnPI CCDG 5 cut(s) 9, 36, 156, 162, 189
MalI GATC 1 cut(s) 48
MboI GATC 1 cut(s) 46
MluCI AATT 2 cut(s) 202, 241
MlyI GAGTC 1 cut(s) 21
MnlI CCTC 1 cut(s) 81
MseI TTAA 4 cut(s) 105, 195, 200, 258
MspR9I CCNGG 2 cut(s) 24, 177
MvaI CCWGG 2 cut(s) 24, 177
NdeII GATC 1 cut(s) 46
NlaIII CATG 2 cut(s) 172, 213
NlaIV GGNNCC 1 cut(s) 174
NspI RCATGY 1 cut(s) 213
PfeI GAWTC 1 cut(s) 137
PleI GAGTC 1 cut(s) 21
PpsI GAGTC 1 cut(s) 21
Psp6I CCWGG 2 cut(s) 22, 175
PspGI CCWGG 2 cut(s) 22, 175
PspN4I GGNNCC 1 cut(s) 174
PspPI GGNCC 1 cut(s) 81
RsaI GTAC 1 cut(s) 156
RsaNI GTAC 1 cut(s) 155
Rsr2I CGGWCCG 1 cut(s) 81
RsrII CGGWCCG 1 cut(s) 81
SaqAI TTAA 4 cut(s) 105, 195, 200, 258
Sau3AI GATC 1 cut(s) 46
Sau96I GGNCC 1 cut(s) 81
SchI GAGTC 1 cut(s) 21
ScrFI CCNGG 2 cut(s) 24, 177
SetI ASST 1 cut(s) 59
SinI GGWCC 1 cut(s) 81
SmiI ATTTAAAT 1 cut(s) 106
Sse9I AATT 2 cut(s) 202, 241
StyD4I CCNGG 2 cut(s) 22, 175
SwaI ATTTAAAT 1 cut(s) 106
TaaI ACNGT 2 cut(s) 252, 288
TaqII GACCGA 1 cut(s) 69
TasI AATT 2 cut(s) 202, 241
TatI WGTACW 1 cut(s) 154
TfiI GAWTC 1 cut(s) 137
Tru1I TTAA 4 cut(s) 105, 195, 200, 258
Tru9I TTAA 4 cut(s) 105, 195, 200, 258
TscAI CASTG 1 cut(s) 255
TspGWI ACGGA 1 cut(s) 73
TspRI CASTG 1 cut(s) 255
VpaK11BI GGWCC 1 cut(s) 81
XapI RAATTY 1 cut(s) 202
XceI RCATGY 1 cut(s) 213
XmiI GTMKAC 1 cut(s) 93
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.