pycom15g17800

Belongs to the peptidase M16 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
N/A
Physical Location & Seq
Reverse (-)
12617162 .. 12617778
617 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 333 bp
ATGATGTTGCAACGAAGCCGTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTCCTTTCCGAGGTTTGTTTTGGCTGGCTGATTGTGGAAAAGTCCAGGTCTATGCCTCCATTAGGCTTGCTTCTTTCAGGCATCAACCTCCCACCTGCATTGCCTGACCATGTTCAACCAGTAGATGTTAAGATAACAACTCTCCCGAATTGTGTCAAAATAGTTTCCTTAAGGTCAGAGGAAACTCATTGTGACCTTGCATTTAAACTTCCTGGTGCCTGGCACAATGAGAGGGATGCAATGACTGAATATTCTTCAGGATTGAAAGTTGGAAGGCGGTAA

Protein Analysis

111

Amino Acids

12.18

Weight (kDa)

8.57

Isoelectric Point (pI)

75.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 154
Acc36I ACCTGC 1 cut(s) 154
AccB1I GGYRCC 1 cut(s) 266
AciI CCGC 1 cut(s) 328
AcuI CTGAAG 1 cut(s) 291
AfiI CCNNNNNNNGG 2 cut(s) 61, 113
AflII CTTAAG 1 cut(s) 220
AgsI TTSAA 2 cut(s) 167, 316
AjnI CCWGG 3 cut(s) 95, 262, 269
BanI GGYRCC 1 cut(s) 266
BbsI GAAGAC 1 cut(s) 14
BceAI ACGGC 1 cut(s) 3
BciT130I CCWGG 3 cut(s) 97, 264, 271
BfrI CTTAAG 1 cut(s) 220
BfuAI ACCTGC 1 cut(s) 154
Bme1390I CCNGG 3 cut(s) 97, 264, 271
BmiI GGNNCC 1 cut(s) 268
BmrFI CCNGG 3 cut(s) 97, 264, 271
BmsI GCATC 2 cut(s) 141, 277
BpiI GAAGAC 1 cut(s) 14
BsaJI CCNNGG 1 cut(s) 60
Bsc4I CCNNNNNNNGG 2 cut(s) 61, 113
Bse1I ACTGG 1 cut(s) 170
Bse3DI GCAATG 2 cut(s) 149, 297
BseBI CCWGG 3 cut(s) 97, 264, 271
BseDI CCNNGG 1 cut(s) 60
BseGI GGATG 1 cut(s) 292
BseLI CCNNNNNNNGG 2 cut(s) 61, 113
BseMI GCAATG 2 cut(s) 149, 297
BseNI ACTGG 1 cut(s) 170
BseRI GAGGAG 8 cut(s) 18, 21, 24, 27, 30, 33, 36, 39
BshNI GGYRCC 1 cut(s) 266
BslI CCNNNNNNNGG 2 cut(s) 61, 113
BspACI CCGC 1 cut(s) 328
BspLI GGNNCC 1 cut(s) 268
BspMI ACCTGC 1 cut(s) 154
BspT107I GGYRCC 1 cut(s) 266
BspTI CTTAAG 1 cut(s) 220
BsrDI GCAATG 2 cut(s) 149, 297
BsrI ACTGG 1 cut(s) 170
BssECI CCNNGG 1 cut(s) 60
Bst2UI CCWGG 3 cut(s) 97, 264, 271
BstAFI CTTAAG 1 cut(s) 220
BstC8I GCNNGC 2 cut(s) 77, 119
BstENI CCTNNNNNAGG 2 cut(s) 59, 111
BstF5I GGATG 1 cut(s) 292
BstNI CCWGG 3 cut(s) 97, 264, 271
BstSCI CCNGG 3 cut(s) 95, 262, 269
BstV2I GAAGAC 1 cut(s) 14
BtsCI GGATG 1 cut(s) 292
BveI ACCTGC 1 cut(s) 154
Cac8I GCNNGC 2 cut(s) 77, 119
CspCI CAANNNNNGTGG 2 cut(s) 132, 167
CviAII CATG 1 cut(s) 161
CviJI RGCY 4 cut(s) 18, 75, 79, 117
CviKI_1 RGCY 4 cut(s) 18, 75, 79, 117
DraI TTTAAA 1 cut(s) 256
Eco57I CTGAAG 1 cut(s) 291
EcoNI CCTNNNNNAGG 2 cut(s) 59, 111
EcoRII CCWGG 3 cut(s) 95, 262, 269
FaeI CATG 1 cut(s) 164
FaiI YATR 2 cut(s) 104, 162
FatI CATG 1 cut(s) 160
FokI GGATG 1 cut(s) 299
Hin1II CATG 1 cut(s) 164
Hpy188I TCNGA 2 cut(s) 61, 229
Hpy188III TCNNGA 2 cut(s) 196, 309
HpyAV CCTTC 1 cut(s) 318
HpyCH4V TGCA 4 cut(s) 10, 149, 251, 290
Hsp92II CATG 1 cut(s) 164
LweI GCATC 2 cut(s) 141, 277
MaeIII GTNAC 1 cut(s) 242
MboII GAAGA 2 cut(s) 14, 297
MluCI AATT 1 cut(s) 199
MmeI TCCRAC 1 cut(s) 301
MseI TTAA 3 cut(s) 180, 221, 255
MspCI CTTAAG 1 cut(s) 220
MspR9I CCNGG 3 cut(s) 97, 264, 271
MvaI CCWGG 3 cut(s) 97, 264, 271
NlaIII CATG 1 cut(s) 164
NlaIV GGNNCC 1 cut(s) 268
NmuCI GTSAC 1 cut(s) 242
PaqCI CACCTGC 1 cut(s) 154
Psp6I CCWGG 3 cut(s) 95, 262, 269
PspGI CCWGG 3 cut(s) 95, 262, 269
PspN4I GGNNCC 1 cut(s) 268
SaqAI TTAA 3 cut(s) 180, 221, 255
ScrFI CCNGG 3 cut(s) 97, 264, 271
SetI ASST 6 cut(s) 66, 101, 141, 148, 227, 249
SfaNI GCATC 2 cut(s) 141, 277
SmlI CTYRAG 1 cut(s) 220
SmoI CTYRAG 1 cut(s) 220
Sse9I AATT 1 cut(s) 199
SsiI CCGC 1 cut(s) 328
SspI AATATT 1 cut(s) 302
StyD4I CCNGG 3 cut(s) 95, 262, 269
TasI AATT 1 cut(s) 199
Tru1I TTAA 3 cut(s) 180, 221, 255
Tru9I TTAA 3 cut(s) 180, 221, 255
TseFI GTSAC 1 cut(s) 242
Tsp45I GTSAC 1 cut(s) 242
Vha464I CTTAAG 1 cut(s) 220
XagI CCTNNNNNAGG 2 cut(s) 59, 111
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.