pycom15g18760

phospholipase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
N/A
Physical Location & Seq
Forward (+)
13306654 .. 13306947
294 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 294 bp
ATGCCGGAGCACCGCATGGTCATTACGCATTACATGGGAAGAAGCCAAGAGATGGAGATTGAAATTAAGAATGCTAATAACTGCAAAGAGTATAAAAGCACAGATTCCCTCTCTTCGGTATTATCCTGTCAAGATATCCCACTTCTTACACCCCAAGAAGCTAATGGGCTGAGTTTCTTATATGAAGACACAAAACTAAATGGGATGGACTCTCCTCGTGATCTCCTTGATAAGCCAAGCAGGGTTAGCAACAATCTTGCTTCCTTTTTAGAAAGTCAAAAATTACACCAGTAG

Protein Analysis

98

Amino Acids

11.06

Weight (kDa)

5.25

Isoelectric Point (pI)

59.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 52
AciI CCGC 1 cut(s) 13
AfiI CCNNNNNNNGG 2 cut(s) 52, 115
AgsI TTSAA 1 cut(s) 62
AluBI AGCT 1 cut(s) 161
AluI AGCT 1 cut(s) 161
Alw21I GWGCWC 1 cut(s) 12
BauI CACGAG 1 cut(s) 216
BbsI GAAGAC 1 cut(s) 192
Bbv12I GWGCWC 1 cut(s) 12
BccI CCATC 2 cut(s) 46, 199
BpiI GAAGAC 1 cut(s) 192
Bsc4I CCNNNNNNNGG 2 cut(s) 52, 115
Bse1I ACTGG 1 cut(s) 289
BseGI GGATG 1 cut(s) 210
BseLI CCNNNNNNNGG 2 cut(s) 52, 115
BseMII CTCAG 1 cut(s) 161
BseNI ACTGG 1 cut(s) 289
BseRI GAGGAG 1 cut(s) 204
BsiHKAI GWGCWC 1 cut(s) 12
BsiSI CCGG 1 cut(s) 5
BslI CCNNNNNNNGG 2 cut(s) 52, 115
BsmI GAATGC 1 cut(s) 76
Bsp1286I GDGCHC 1 cut(s) 12
Bsp143I GATC 1 cut(s) 220
BspACI CCGC 1 cut(s) 13
BspCNI CTCAG 1 cut(s) 162
BsrI ACTGG 1 cut(s) 289
BssMI GATC 1 cut(s) 220
BssSI CACGAG 1 cut(s) 216
Bst2BI CACGAG 1 cut(s) 216
Bst6I CTCTTC 1 cut(s) 118
BstDEI CTNAG 1 cut(s) 170
BstF5I GGATG 1 cut(s) 210
BstKTI GATC 1 cut(s) 223
BstMBI GATC 1 cut(s) 220
BstMWI GCNNNNNNNGC 1 cut(s) 246
BstV2I GAAGAC 1 cut(s) 192
BtsCI GGATG 1 cut(s) 210
CviAII CATG 2 cut(s) 16, 34
CviJI RGCY 4 cut(s) 45, 161, 169, 235
CviKI_1 RGCY 4 cut(s) 45, 161, 169, 235
DdeI CTNAG 1 cut(s) 170
DpnI GATC 1 cut(s) 222
DpnII GATC 1 cut(s) 220
Eam1104I CTCTTC 1 cut(s) 118
EarI CTCTTC 1 cut(s) 118
Eco32I GATATC 1 cut(s) 136
EcoRV GATATC 1 cut(s) 136
FaeI CATG 2 cut(s) 19, 37
FaiI YATR 5 cut(s) 17, 35, 93, 181, 183
FatI CATG 2 cut(s) 15, 33
FokI GGATG 1 cut(s) 217
HapII CCGG 1 cut(s) 5
Hin1II CATG 2 cut(s) 19, 37
HinfI GANTC 2 cut(s) 104, 209
HpaII CCGG 1 cut(s) 5
Hpy188III TCNNGA 2 cut(s) 131, 218
HpyCH4V TGCA 1 cut(s) 84
HpyF10VI GCNNNNNNNGC 1 cut(s) 246
HpyF3I CTNAG 1 cut(s) 170
Hsp92II CATG 2 cut(s) 19, 37
Kzo9I GATC 1 cut(s) 220
LmnI GCTCC 1 cut(s) 7
LpnPI CCDG 3 cut(s) 18, 139, 226
MalI GATC 1 cut(s) 222
MboI GATC 1 cut(s) 220
MboII GAAGA 3 cut(s) 51, 105, 197
MhlI GDGCHC 1 cut(s) 12
MluCI AATT 2 cut(s) 63, 281
MlyI GAGTC 1 cut(s) 203
MnlI CCTC 2 cut(s) 119, 225
MseI TTAA 1 cut(s) 66
MspI CCGG 1 cut(s) 5
Mva1269I GAATGC 1 cut(s) 76
MwoI GCNNNNNNNGC 1 cut(s) 246
NdeII GATC 1 cut(s) 220
NlaIII CATG 2 cut(s) 19, 37
PctI GAATGC 1 cut(s) 76
PfeI GAWTC 1 cut(s) 104
PflMI CCANNNNNTGG 1 cut(s) 52
PleI GAGTC 1 cut(s) 203
PpsI GAGTC 1 cut(s) 203
SaqAI TTAA 1 cut(s) 66
Sau3AI GATC 1 cut(s) 220
SchI GAGTC 1 cut(s) 203
SduI GDGCHC 1 cut(s) 12
SetI ASST 1 cut(s) 163
Sse9I AATT 2 cut(s) 63, 281
SsiI CCGC 1 cut(s) 13
TasI AATT 2 cut(s) 63, 281
TfiI GAWTC 1 cut(s) 104
Tru1I TTAA 1 cut(s) 66
Tru9I TTAA 1 cut(s) 66
TspDTI ATGAA 1 cut(s) 198
Van91I CCANNNNNTGG 1 cut(s) 52
XcmI CCANNNNNNNNNTGG 1 cut(s) 161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.